Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS05820

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,197,280	+		DZA65_RS05815	0.32	-0.5
1,197,281	-		DZA65_RS05815	0.32	-1.6
1,197,281	-		DZA65_RS05815	0.32	-2.3
1,197,317	+		DZA65_RS05815	0.35	+1.2
1,197,317	+		DZA65_RS05815	0.35	-0.1
1,197,317	+		DZA65_RS05815	0.35	+0.1
1,197,317	+		DZA65_RS05815	0.35	+0.2
1,197,318	-		DZA65_RS05815	0.35	-0.2
1,197,318	-		DZA65_RS05815	0.35	+0.1
1,197,318	-		DZA65_RS05815	0.35	+1.3
1,197,318	-		DZA65_RS05815	0.35	-0.2
1,197,318	-		DZA65_RS05815	0.35	-0.6
1,197,527	+		DZA65_RS05815	0.51	+0.5
1,197,528	-		DZA65_RS05815	0.51	-0.3
1,197,833	+		DZA65_RS05815	0.74	-1.9
1,197,833	+		DZA65_RS05815	0.74	-1.9
1,197,833	+		DZA65_RS05815	0.74	-0.9
1,197,833	+		DZA65_RS05815	0.74	-0.4
1,197,833	+		DZA65_RS05815	0.74	+0.1
1,197,833	+		DZA65_RS05815	0.74	+0.1
1,197,833	+		DZA65_RS05815	0.74	-0.2
1,197,833	+		DZA65_RS05815	0.74	+0.5
1,197,833	+		DZA65_RS05815	0.74	+0.6
1,197,834	-		DZA65_RS05815	0.74	-1.1
1,197,834	-		DZA65_RS05815	0.74	-0.0
1,197,834	-		DZA65_RS05815	0.74	+0.6
1,197,834	-		DZA65_RS05815	0.74	-0.9
1,197,851	-		DZA65_RS05815	0.75	+0.1
1,197,851	-		DZA65_RS05815	0.75	-0.7
1,197,851	-		DZA65_RS05815	0.75	+0.5
1,197,870	+		DZA65_RS05815	0.77	+1.2
1,197,871	-		DZA65_RS05815	0.77	-0.1
1,197,871	-		DZA65_RS05815	0.77	+0.2
1,197,871	-		DZA65_RS05815	0.77	+0.6
1,197,974	+		DZA65_RS05815	0.85	+0.4
1,197,975	-		DZA65_RS05815	0.85	+1.3
1,198,221	+				+0.4
1,198,222	-				+0.7
1,198,267	+				+1.1
1,198,434	+		DZA65_RS05820	0.18	-0.4
1,198,434	+		DZA65_RS05820	0.18	-0.8
1,198,434	+		DZA65_RS05820	0.18	-2.1
1,198,434	+		DZA65_RS05820	0.18	-0.0
1,198,434	+		DZA65_RS05820	0.18	-0.4
1,198,435	-		DZA65_RS05820	0.18	+0.6
1,198,970	+		DZA65_RS05820	0.72	+0.3
1,198,970	+		DZA65_RS05820	0.72	-1.4
1,198,970	+		DZA65_RS05820	0.72	+0.3
1,198,971	-		DZA65_RS05820	0.73	+0.5
1,198,971	-		DZA65_RS05820	0.73	-1.3
1,198,971	-		DZA65_RS05820	0.73	-1.9
1,199,015	+		DZA65_RS05820	0.77	-0.6
1,199,015	+		DZA65_RS05820	0.77	+0.3
1,199,015	+		DZA65_RS05820	0.77	-0.1
1,199,016	-		DZA65_RS05820	0.77	+0.4
1,199,016	-		DZA65_RS05820	0.77	+0.2
1,199,016	-		DZA65_RS05820	0.77	-0.5
1,199,016	-		DZA65_RS05820	0.77	-1.6
1,199,016	-		DZA65_RS05820	0.77	+0.4
1,199,024	+		DZA65_RS05820	0.78	+0.6
1,199,030	+		DZA65_RS05820	0.79	-0.2
1,199,030	+		DZA65_RS05820	0.79	+0.4
1,199,030	+		DZA65_RS05820	0.79	-0.5
1,199,031	-		DZA65_RS05820	0.79	-2.1
1,199,036	+		DZA65_RS05820	0.79	-1.7
1,199,036	+		DZA65_RS05820	0.79	-2.3
1,199,036	+		DZA65_RS05820	0.79	+0.6
1,199,036	+		DZA65_RS05820	0.79	+0.1
1,199,036	+		DZA65_RS05820	0.79	+0.0
1,199,036	+		DZA65_RS05820	0.79	-0.6
1,199,036	+		DZA65_RS05820	0.79	+0.1
1,199,036	+		DZA65_RS05820	0.79	-0.3
1,199,036	+		DZA65_RS05820	0.79	-0.4
1,199,036	+		DZA65_RS05820	0.79	-1.1
1,199,037	-		DZA65_RS05820	0.79	-0.6
1,199,044	+				-1.5
1,199,045	-		DZA65_RS05820	0.80	-0.4
1,199,138	+		DZA65_RS05820	0.90	-0.5
1,199,138	+		DZA65_RS05820	0.90	-0.3
1,199,139	-				+1.5
1,199,353	+				-0.9
1,199,357	+				+1.2
1,199,358	-				-1.5
1,199,382	+				-1.4
1,199,383	-				-0.4
1,199,383	-				-0.5
1,199,389	+				+0.9
1,199,714	-		DZA65_RS05825	0.23	-0.5
1,199,714	-		DZA65_RS05825	0.23	+0.4
1,199,768	+		DZA65_RS05825	0.28	+0.2
1,199,769	-		DZA65_RS05825	0.28	+0.1
1,199,769	-				+0.1
1,199,769	-		DZA65_RS05825	0.28	+0.5
1,199,769	-		DZA65_RS05825	0.28	-0.9
1,199,907	+		DZA65_RS05825	0.41	-1.2
1,199,908	-		DZA65_RS05825	0.41	-0.7
1,199,947	+		DZA65_RS05825	0.44	-0.7
1,199,948	-		DZA65_RS05825	0.44	+0.3
1,199,995	+		DZA65_RS05825	0.49	-0.3
1,199,995	+		DZA65_RS05825	0.49	-0.1
1,199,995	+		DZA65_RS05825	0.49	+0.1
1,199,996	-		DZA65_RS05825	0.49	-0.1
1,199,996	-		DZA65_RS05825	0.49	-0.0
1,199,996	-		DZA65_RS05825	0.49	+0.5
1,199,996	-		DZA65_RS05825	0.49	+0.1
1,199,996	-		DZA65_RS05825	0.49	+0.5
1,200,030	+		DZA65_RS05825	0.52	-0.8
1,200,031	-		DZA65_RS05825	0.52	-1.7
1,200,043	+		DZA65_RS05825	0.53	-0.1
1,200,043	+		DZA65_RS05825	0.53	-1.3
1,200,043	+		DZA65_RS05825	0.53	+1.1
1,200,044	-		DZA65_RS05825	0.53	+0.1
1,200,044	-		DZA65_RS05825	0.53	+0.4
1,200,044	-		DZA65_RS05825	0.53	-0.5
1,200,044	-		DZA65_RS05825	0.53	-1.7
1,200,044	-		DZA65_RS05825	0.53	-0.8
1,200,115	+		DZA65_RS05825	0.59	-0.3
1,200,115	+		DZA65_RS05825	0.59	-0.6
1,200,115	+		DZA65_RS05825	0.59	-1.9
1,200,115	+		DZA65_RS05825	0.59	+0.5
1,200,115	+		DZA65_RS05825	0.59	+0.3
1,200,116	-		DZA65_RS05825	0.59	-0.3
1,200,116	-		DZA65_RS05825	0.59	-2.3
1,200,116	-		DZA65_RS05825	0.59	-0.2
1,200,116	-		DZA65_RS05825	0.59	+1.1
1,200,116	-		DZA65_RS05825	0.59	-1.7
1,200,223	+		DZA65_RS05825	0.69	-0.5