Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS04445 and DZA65_RS04450 are separated by 62 nucleotides DZA65_RS04450 and DZA65_RS04455 are separated by 62 nucleotides
DZA65_RS04445: DZA65_RS04445 - FAD-dependent oxidoreductase, at 927,081 to 928,652
_RS04445
DZA65_RS04450: DZA65_RS04450 - FMN-binding protein, at 928,715 to 929,065
_RS04450
DZA65_RS04455: DZA65_RS04455 - MFS transporter, at 929,128 to 930,507
_RS04455
Position (kb) 928
929
930 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 927.739 kb on + strand, within DZA65_RS04445 at 927.740 kb on - strand, within DZA65_RS04445 at 927.740 kb on - strand, within DZA65_RS04445 at 927.810 kb on + strand, within DZA65_RS04445 at 927.810 kb on + strand, within DZA65_RS04445 at 927.810 kb on + strand, within DZA65_RS04445 at 927.810 kb on + strand, within DZA65_RS04445 at 927.810 kb on + strand, within DZA65_RS04445 at 927.810 kb on + strand, within DZA65_RS04445 at 927.810 kb on + strand, within DZA65_RS04445 at 927.810 kb on + strand, within DZA65_RS04445 at 927.810 kb on + strand, within DZA65_RS04445 at 927.810 kb on + strand at 927.811 kb on - strand, within DZA65_RS04445 at 927.811 kb on - strand, within DZA65_RS04445 at 927.811 kb on - strand, within DZA65_RS04445 at 927.811 kb on - strand, within DZA65_RS04445 at 927.811 kb on - strand, within DZA65_RS04445 at 927.811 kb on - strand, within DZA65_RS04445 at 927.811 kb on - strand, within DZA65_RS04445 at 927.811 kb on - strand, within DZA65_RS04445 at 927.811 kb on - strand, within DZA65_RS04445 at 927.811 kb on - strand, within DZA65_RS04445 at 927.811 kb on - strand, within DZA65_RS04445 at 927.811 kb on - strand, within DZA65_RS04445 at 927.811 kb on - strand, within DZA65_RS04445 at 927.811 kb on - strand, within DZA65_RS04445 at 927.811 kb on - strand, within DZA65_RS04445 at 927.813 kb on + strand, within DZA65_RS04445 at 927.813 kb on + strand, within DZA65_RS04445 at 927.814 kb on - strand, within DZA65_RS04445 at 927.814 kb on - strand, within DZA65_RS04445 at 927.916 kb on + strand, within DZA65_RS04445 at 927.916 kb on + strand, within DZA65_RS04445 at 927.916 kb on + strand, within DZA65_RS04445 at 927.917 kb on - strand, within DZA65_RS04445 at 927.917 kb on - strand, within DZA65_RS04445 at 927.917 kb on - strand, within DZA65_RS04445 at 927.917 kb on - strand, within DZA65_RS04445 at 927.917 kb on - strand, within DZA65_RS04445 at 927.917 kb on - strand, within DZA65_RS04445 at 927.961 kb on - strand, within DZA65_RS04445 at 927.974 kb on + strand, within DZA65_RS04445 at 927.975 kb on - strand, within DZA65_RS04445 at 927.975 kb on - strand, within DZA65_RS04445 at 927.975 kb on - strand, within DZA65_RS04445 at 927.981 kb on + strand, within DZA65_RS04445 at 927.982 kb on - strand, within DZA65_RS04445 at 927.982 kb on - strand, within DZA65_RS04445 at 927.982 kb on - strand, within DZA65_RS04445 at 928.076 kb on + strand, within DZA65_RS04445 at 928.077 kb on - strand, within DZA65_RS04445 at 928.077 kb on - strand, within DZA65_RS04445 at 928.077 kb on - strand, within DZA65_RS04445 at 928.192 kb on + strand, within DZA65_RS04445 at 928.192 kb on + strand, within DZA65_RS04445 at 928.192 kb on + strand, within DZA65_RS04445 at 928.192 kb on + strand, within DZA65_RS04445 at 928.192 kb on + strand, within DZA65_RS04445 at 928.192 kb on + strand, within DZA65_RS04445 at 928.192 kb on + strand, within DZA65_RS04445 at 928.192 kb on + strand, within DZA65_RS04445 at 928.192 kb on + strand, within DZA65_RS04445 at 928.193 kb on - strand, within DZA65_RS04445 at 928.193 kb on - strand, within DZA65_RS04445 at 928.193 kb on - strand, within DZA65_RS04445 at 928.193 kb on - strand, within DZA65_RS04445 at 928.193 kb on - strand, within DZA65_RS04445 at 928.193 kb on - strand, within DZA65_RS04445 at 928.193 kb on - strand, within DZA65_RS04445 at 928.193 kb on - strand, within DZA65_RS04445 at 928.193 kb on - strand, within DZA65_RS04445 at 928.291 kb on + strand, within DZA65_RS04445 at 928.292 kb on - strand, within DZA65_RS04445 at 928.292 kb on - strand, within DZA65_RS04445 at 928.329 kb on + strand, within DZA65_RS04445 at 928.329 kb on + strand, within DZA65_RS04445 at 928.329 kb on + strand, within DZA65_RS04445 at 928.329 kb on + strand, within DZA65_RS04445 at 928.330 kb on - strand, within DZA65_RS04445 at 928.330 kb on - strand, within DZA65_RS04445 at 928.330 kb on - strand, within DZA65_RS04445 at 928.330 kb on - strand, within DZA65_RS04445 at 928.330 kb on - strand, within DZA65_RS04445 at 928.458 kb on - strand, within DZA65_RS04445 at 928.548 kb on - strand at 928.617 kb on + strand at 928.653 kb on - strand at 928.653 kb on - strand at 928.655 kb on + strand at 928.655 kb on + strand at 928.655 kb on + strand at 928.655 kb on + strand at 928.656 kb on - strand at 928.656 kb on - strand at 928.656 kb on - strand at 928.672 kb on - strand at 928.672 kb on - strand at 928.737 kb on + strand at 928.972 kb on - strand, within DZA65_RS04450 at 929.065 kb on + strand at 929.065 kb on + strand at 929.066 kb on - strand at 929.066 kb on - strand at 929.066 kb on - strand at 929.089 kb on - strand at 929.097 kb on - strand at 929.099 kb on + strand at 929.099 kb on + strand at 929.100 kb on - strand at 929.103 kb on + strand at 929.104 kb on - strand at 929.104 kb on - strand at 929.104 kb on - strand at 929.146 kb on + strand at 929.146 kb on + strand at 929.146 kb on + strand at 929.147 kb on - strand at 929.147 kb on - strand at 929.147 kb on - strand at 929.147 kb on - strand at 929.149 kb on + strand at 929.149 kb on + strand at 929.149 kb on + strand at 929.149 kb on + strand at 929.149 kb on + strand at 929.149 kb on + strand at 929.149 kb on + strand at 929.150 kb on - strand at 929.150 kb on - strand at 929.150 kb on - strand at 929.150 kb on - strand at 929.150 kb on - strand at 929.150 kb on - strand at 929.150 kb on - strand at 929.150 kb on - strand at 929.150 kb on - strand at 929.150 kb on - strand at 929.150 kb on - strand at 929.150 kb on - strand at 929.150 kb on - strand at 929.150 kb on - strand at 929.150 kb on - strand at 929.704 kb on + strand, within DZA65_RS04455 at 929.726 kb on + strand, within DZA65_RS04455 at 929.726 kb on + strand, within DZA65_RS04455 at 929.726 kb on + strand, within DZA65_RS04455 at 929.726 kb on + strand, within DZA65_RS04455 at 929.726 kb on + strand, within DZA65_RS04455 at 929.726 kb on + strand, within DZA65_RS04455 at 929.726 kb on + strand, within DZA65_RS04455 at 929.726 kb on + strand, within DZA65_RS04455 at 929.727 kb on - strand, within DZA65_RS04455 at 929.727 kb on - strand, within DZA65_RS04455 at 929.727 kb on - strand, within DZA65_RS04455 at 929.727 kb on - strand, within DZA65_RS04455 at 929.727 kb on - strand, within DZA65_RS04455 at 929.727 kb on - strand, within DZA65_RS04455 at 929.727 kb on - strand, within DZA65_RS04455 at 929.777 kb on + strand, within DZA65_RS04455 at 929.778 kb on - strand, within DZA65_RS04455 at 929.795 kb on + strand, within DZA65_RS04455 at 929.796 kb on - strand, within DZA65_RS04455 at 929.796 kb on - strand, within DZA65_RS04455 at 929.934 kb on + strand, within DZA65_RS04455 at 929.935 kb on - strand, within DZA65_RS04455 at 929.935 kb on - strand, within DZA65_RS04455 at 929.973 kb on - strand, within DZA65_RS04455
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 927,739 + DZA65_RS04445 0.42 +0.4 927,740 - DZA65_RS04445 0.42 -0.1 927,740 - DZA65_RS04445 0.42 -1.0 927,810 + DZA65_RS04445 0.46 -0.6 927,810 + DZA65_RS04445 0.46 -0.7 927,810 + DZA65_RS04445 0.46 -0.4 927,810 + DZA65_RS04445 0.46 -0.8 927,810 + DZA65_RS04445 0.46 -0.5 927,810 + DZA65_RS04445 0.46 -2.3 927,810 + DZA65_RS04445 0.46 -0.2 927,810 + DZA65_RS04445 0.46 -0.7 927,810 + DZA65_RS04445 0.46 -0.3 927,810 + -1.5 927,811 - DZA65_RS04445 0.46 +0.5 927,811 - DZA65_RS04445 0.46 -0.9 927,811 - DZA65_RS04445 0.46 -0.3 927,811 - DZA65_RS04445 0.46 -1.1 927,811 - DZA65_RS04445 0.46 -0.9 927,811 - DZA65_RS04445 0.46 -0.1 927,811 - DZA65_RS04445 0.46 -0.7 927,811 - DZA65_RS04445 0.46 -0.3 927,811 - DZA65_RS04445 0.46 -1.1 927,811 - DZA65_RS04445 0.46 -0.9 927,811 - DZA65_RS04445 0.46 +0.6 927,811 - DZA65_RS04445 0.46 -0.2 927,811 - DZA65_RS04445 0.46 -0.2 927,811 - DZA65_RS04445 0.46 -0.9 927,811 - DZA65_RS04445 0.46 +1.3 927,813 + DZA65_RS04445 0.47 +0.1 927,813 + DZA65_RS04445 0.47 -0.6 927,814 - DZA65_RS04445 0.47 +0.2 927,814 - DZA65_RS04445 0.47 -0.5 927,916 + DZA65_RS04445 0.53 +1.1 927,916 + DZA65_RS04445 0.53 +0.8 927,916 + DZA65_RS04445 0.53 -0.7 927,917 - DZA65_RS04445 0.53 +1.1 927,917 - DZA65_RS04445 0.53 -0.5 927,917 - DZA65_RS04445 0.53 +0.4 927,917 - DZA65_RS04445 0.53 +0.4 927,917 - DZA65_RS04445 0.53 +0.1 927,917 - DZA65_RS04445 0.53 -0.7 927,961 - DZA65_RS04445 0.56 +1.1 927,974 + DZA65_RS04445 0.57 +0.3 927,975 - DZA65_RS04445 0.57 +0.4 927,975 - DZA65_RS04445 0.57 -0.9 927,975 - DZA65_RS04445 0.57 -0.6 927,981 + DZA65_RS04445 0.57 +1.1 927,982 - DZA65_RS04445 0.57 +1.5 927,982 - DZA65_RS04445 0.57 -1.1 927,982 - DZA65_RS04445 0.57 -0.3 928,076 + DZA65_RS04445 0.63 -2.0 928,077 - DZA65_RS04445 0.63 -2.1 928,077 - DZA65_RS04445 0.63 -0.5 928,077 - DZA65_RS04445 0.63 -0.5 928,192 + DZA65_RS04445 0.71 +0.3 928,192 + DZA65_RS04445 0.71 -0.7 928,192 + DZA65_RS04445 0.71 -2.3 928,192 + DZA65_RS04445 0.71 -0.7 928,192 + DZA65_RS04445 0.71 +0.8 928,192 + DZA65_RS04445 0.71 -0.7 928,192 + DZA65_RS04445 0.71 -0.2 928,192 + DZA65_RS04445 0.71 +0.6 928,192 + DZA65_RS04445 0.71 -1.5 928,193 - DZA65_RS04445 0.71 -0.3 928,193 - DZA65_RS04445 0.71 -0.7 928,193 - DZA65_RS04445 0.71 -0.3 928,193 - DZA65_RS04445 0.71 -3.0 928,193 - DZA65_RS04445 0.71 +0.6 928,193 - DZA65_RS04445 0.71 -1.2 928,193 - DZA65_RS04445 0.71 -1.7 928,193 - DZA65_RS04445 0.71 -0.3 928,193 - DZA65_RS04445 0.71 -0.7 928,291 + DZA65_RS04445 0.77 -1.5 928,292 - DZA65_RS04445 0.77 -0.8 928,292 - DZA65_RS04445 0.77 -0.9 928,329 + DZA65_RS04445 0.79 -0.9 928,329 + DZA65_RS04445 0.79 +0.3 928,329 + DZA65_RS04445 0.79 -0.9 928,329 + DZA65_RS04445 0.79 -0.1 928,330 - DZA65_RS04445 0.79 -1.0 928,330 - DZA65_RS04445 0.79 -0.3 928,330 - DZA65_RS04445 0.79 -0.2 928,330 - DZA65_RS04445 0.79 -0.2 928,330 - DZA65_RS04445 0.79 +0.1 928,458 - DZA65_RS04445 0.88 -0.1 928,548 - -0.2 928,617 + -0.2 928,653 - -1.1 928,653 - -1.2 928,655 + +0.0 928,655 + +0.4 928,655 + +0.4 928,655 + -0.0 928,656 - -0.5 928,656 - +0.3 928,656 - +0.0 928,672 - -0.8 928,672 - -0.4 928,737 + -0.3 928,972 - DZA65_RS04450 0.73 +0.1 929,065 + -0.9 929,065 + -0.6 929,066 - -0.0 929,066 - -1.3 929,066 - +0.1 929,089 - -0.5 929,097 - -0.9 929,099 + +0.4 929,099 + -0.0 929,100 - +0.3 929,103 + +0.8 929,104 - -0.3 929,104 - +0.1 929,104 - +0.4 929,146 + -0.7 929,146 + +1.1 929,146 + +0.5 929,147 - +0.3 929,147 - -0.3 929,147 - -0.7 929,147 - -0.5 929,149 + -0.3 929,149 + -0.4 929,149 + -0.1 929,149 + +1.0 929,149 + -0.3 929,149 + -1.2 929,149 + -0.4 929,150 - +0.3 929,150 - +0.1 929,150 - -1.0 929,150 - -0.9 929,150 - -0.5 929,150 - +0.7 929,150 - -0.3 929,150 - +0.7 929,150 - -1.6 929,150 - +1.1 929,150 - -1.2 929,150 - -0.2 929,150 - -0.1 929,150 - +0.1 929,150 - +1.5 929,704 + DZA65_RS04455 0.42 +1.3 929,726 + DZA65_RS04455 0.43 -0.7 929,726 + DZA65_RS04455 0.43 +0.4 929,726 + DZA65_RS04455 0.43 +0.2 929,726 + DZA65_RS04455 0.43 -0.5 929,726 + DZA65_RS04455 0.43 -1.2 929,726 + DZA65_RS04455 0.43 -0.3 929,726 + DZA65_RS04455 0.43 +0.3 929,726 + DZA65_RS04455 0.43 +1.1 929,727 - DZA65_RS04455 0.43 -0.0 929,727 - DZA65_RS04455 0.43 -1.1 929,727 - DZA65_RS04455 0.43 -0.7 929,727 - DZA65_RS04455 0.43 -1.3 929,727 - DZA65_RS04455 0.43 -0.8 929,727 - DZA65_RS04455 0.43 -0.5 929,727 - DZA65_RS04455 0.43 +0.1 929,777 + DZA65_RS04455 0.47 -0.3 929,778 - DZA65_RS04455 0.47 -0.7 929,795 + DZA65_RS04455 0.48 -1.0 929,796 - DZA65_RS04455 0.48 +0.9 929,796 - DZA65_RS04455 0.48 -0.5 929,934 + DZA65_RS04455 0.58 -0.7 929,935 - DZA65_RS04455 0.58 -1.3 929,935 - DZA65_RS04455 0.58 -0.6 929,973 - DZA65_RS04455 0.61 +0.0
Or see this region's nucleotide sequence