Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS03600 and DZA65_RS03605 are separated by 28 nucleotides DZA65_RS03605 and DZA65_RS03610 are separated by 113 nucleotides
DZA65_RS03600: DZA65_RS03600 - efflux transporter outer membrane subunit, at 755,908 to 757,293
_RS03600
DZA65_RS03605: DZA65_RS03605 - cation efflux system protein CusF, at 757,322 to 757,675
_RS03605
DZA65_RS03610: DZA65_RS03610 - efflux RND transporter periplasmic adaptor subunit, at 757,789 to 759,078
_RS03610
Position (kb) 757
758 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 756.336 kb on + strand, within DZA65_RS03600 at 756.336 kb on + strand, within DZA65_RS03600 at 756.337 kb on - strand, within DZA65_RS03600 at 756.361 kb on + strand, within DZA65_RS03600 at 756.361 kb on + strand, within DZA65_RS03600 at 756.361 kb on + strand, within DZA65_RS03600 at 756.362 kb on - strand, within DZA65_RS03600 at 756.362 kb on - strand, within DZA65_RS03600 at 756.393 kb on - strand, within DZA65_RS03600 at 756.427 kb on + strand, within DZA65_RS03600 at 756.428 kb on - strand, within DZA65_RS03600 at 756.487 kb on + strand, within DZA65_RS03600 at 756.499 kb on + strand, within DZA65_RS03600 at 756.499 kb on + strand at 756.499 kb on + strand, within DZA65_RS03600 at 756.500 kb on - strand, within DZA65_RS03600 at 756.500 kb on - strand, within DZA65_RS03600 at 756.593 kb on + strand, within DZA65_RS03600 at 756.593 kb on + strand, within DZA65_RS03600 at 756.627 kb on + strand, within DZA65_RS03600 at 756.627 kb on + strand, within DZA65_RS03600 at 756.627 kb on + strand, within DZA65_RS03600 at 756.627 kb on + strand, within DZA65_RS03600 at 756.627 kb on + strand, within DZA65_RS03600 at 756.628 kb on - strand, within DZA65_RS03600 at 756.628 kb on - strand, within DZA65_RS03600 at 756.628 kb on - strand, within DZA65_RS03600 at 756.655 kb on + strand, within DZA65_RS03600 at 756.655 kb on + strand, within DZA65_RS03600 at 756.655 kb on + strand, within DZA65_RS03600 at 756.656 kb on - strand, within DZA65_RS03600 at 756.690 kb on + strand, within DZA65_RS03600 at 756.690 kb on + strand, within DZA65_RS03600 at 756.691 kb on - strand, within DZA65_RS03600 at 756.696 kb on + strand, within DZA65_RS03600 at 756.760 kb on - strand, within DZA65_RS03600 at 756.831 kb on + strand, within DZA65_RS03600 at 756.832 kb on - strand at 756.832 kb on - strand, within DZA65_RS03600 at 756.865 kb on - strand, within DZA65_RS03600 at 756.936 kb on - strand, within DZA65_RS03600 at 756.940 kb on - strand, within DZA65_RS03600 at 756.940 kb on - strand, within DZA65_RS03600 at 757.006 kb on + strand, within DZA65_RS03600 at 757.007 kb on - strand, within DZA65_RS03600 at 757.032 kb on + strand, within DZA65_RS03600 at 757.033 kb on - strand, within DZA65_RS03600 at 757.033 kb on - strand, within DZA65_RS03600 at 757.065 kb on + strand, within DZA65_RS03600 at 757.066 kb on - strand, within DZA65_RS03600 at 757.066 kb on - strand, within DZA65_RS03600 at 757.112 kb on + strand, within DZA65_RS03600 at 757.119 kb on - strand, within DZA65_RS03600 at 757.142 kb on + strand, within DZA65_RS03600 at 757.143 kb on - strand, within DZA65_RS03600 at 757.166 kb on - strand at 757.227 kb on + strand at 757.231 kb on + strand at 757.418 kb on - strand, within DZA65_RS03605 at 757.483 kb on + strand, within DZA65_RS03605 at 757.582 kb on + strand, within DZA65_RS03605 at 757.718 kb on + strand at 757.873 kb on + strand at 757.873 kb on + strand at 757.878 kb on - strand at 757.983 kb on + strand, within DZA65_RS03610 at 758.005 kb on - strand, within DZA65_RS03610 at 758.029 kb on + strand, within DZA65_RS03610 at 758.029 kb on + strand, within DZA65_RS03610 at 758.030 kb on - strand, within DZA65_RS03610 at 758.137 kb on + strand, within DZA65_RS03610 at 758.138 kb on - strand, within DZA65_RS03610 at 758.138 kb on - strand, within DZA65_RS03610 at 758.164 kb on - strand, within DZA65_RS03610 at 758.164 kb on - strand, within DZA65_RS03610 at 758.167 kb on + strand, within DZA65_RS03610 at 758.168 kb on - strand, within DZA65_RS03610 at 758.168 kb on - strand, within DZA65_RS03610 at 758.168 kb on - strand, within DZA65_RS03610 at 758.169 kb on + strand, within DZA65_RS03610 at 758.170 kb on - strand, within DZA65_RS03610 at 758.176 kb on + strand at 758.177 kb on - strand, within DZA65_RS03610 at 758.227 kb on + strand, within DZA65_RS03610 at 758.355 kb on + strand, within DZA65_RS03610 at 758.364 kb on - strand, within DZA65_RS03610 at 758.451 kb on + strand, within DZA65_RS03610 at 758.451 kb on + strand, within DZA65_RS03610 at 758.460 kb on + strand, within DZA65_RS03610 at 758.460 kb on + strand, within DZA65_RS03610 at 758.460 kb on + strand, within DZA65_RS03610 at 758.460 kb on + strand, within DZA65_RS03610 at 758.460 kb on + strand, within DZA65_RS03610 at 758.460 kb on + strand, within DZA65_RS03610 at 758.460 kb on + strand, within DZA65_RS03610 at 758.461 kb on - strand, within DZA65_RS03610 at 758.462 kb on + strand, within DZA65_RS03610 at 758.462 kb on + strand, within DZA65_RS03610 at 758.462 kb on + strand, within DZA65_RS03610 at 758.462 kb on + strand, within DZA65_RS03610 at 758.462 kb on + strand, within DZA65_RS03610 at 758.462 kb on + strand, within DZA65_RS03610 at 758.462 kb on + strand, within DZA65_RS03610 at 758.462 kb on + strand, within DZA65_RS03610 at 758.462 kb on + strand, within DZA65_RS03610 at 758.462 kb on + strand, within DZA65_RS03610 at 758.462 kb on + strand, within DZA65_RS03610 at 758.462 kb on + strand, within DZA65_RS03610 at 758.463 kb on - strand, within DZA65_RS03610 at 758.463 kb on - strand, within DZA65_RS03610 at 758.463 kb on - strand, within DZA65_RS03610 at 758.463 kb on - strand, within DZA65_RS03610 at 758.463 kb on - strand, within DZA65_RS03610 at 758.463 kb on - strand, within DZA65_RS03610 at 758.463 kb on - strand, within DZA65_RS03610 at 758.463 kb on - strand, within DZA65_RS03610 at 758.463 kb on - strand, within DZA65_RS03610 at 758.463 kb on - strand, within DZA65_RS03610 at 758.463 kb on - strand, within DZA65_RS03610 at 758.463 kb on - strand, within DZA65_RS03610 at 758.476 kb on - strand, within DZA65_RS03610 at 758.505 kb on + strand, within DZA65_RS03610 at 758.506 kb on - strand, within DZA65_RS03610 at 758.517 kb on + strand, within DZA65_RS03610 at 758.517 kb on + strand, within DZA65_RS03610 at 758.517 kb on + strand, within DZA65_RS03610 at 758.535 kb on - strand, within DZA65_RS03610 at 758.587 kb on + strand, within DZA65_RS03610 at 758.587 kb on + strand, within DZA65_RS03610 at 758.588 kb on - strand, within DZA65_RS03610 at 758.601 kb on + strand, within DZA65_RS03610 at 758.602 kb on - strand, within DZA65_RS03610
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 756,336 + DZA65_RS03600 0.31 +1.6 756,336 + DZA65_RS03600 0.31 -1.4 756,337 - DZA65_RS03600 0.31 -0.5 756,361 + DZA65_RS03600 0.33 +0.3 756,361 + DZA65_RS03600 0.33 +0.5 756,361 + DZA65_RS03600 0.33 +0.9 756,362 - DZA65_RS03600 0.33 +1.2 756,362 - DZA65_RS03600 0.33 +0.3 756,393 - DZA65_RS03600 0.35 +0.2 756,427 + DZA65_RS03600 0.37 +1.0 756,428 - DZA65_RS03600 0.38 -0.7 756,487 + DZA65_RS03600 0.42 -1.6 756,499 + DZA65_RS03600 0.43 -0.1 756,499 + +1.2 756,499 + DZA65_RS03600 0.43 +0.1 756,500 - DZA65_RS03600 0.43 +0.5 756,500 - DZA65_RS03600 0.43 +0.3 756,593 + DZA65_RS03600 0.49 +1.7 756,593 + DZA65_RS03600 0.49 +0.1 756,627 + DZA65_RS03600 0.52 -0.8 756,627 + DZA65_RS03600 0.52 -0.2 756,627 + DZA65_RS03600 0.52 +0.8 756,627 + DZA65_RS03600 0.52 -0.3 756,627 + DZA65_RS03600 0.52 -1.4 756,628 - DZA65_RS03600 0.52 -0.2 756,628 - DZA65_RS03600 0.52 +0.4 756,628 - DZA65_RS03600 0.52 -0.6 756,655 + DZA65_RS03600 0.54 -0.4 756,655 + DZA65_RS03600 0.54 +0.2 756,655 + DZA65_RS03600 0.54 +0.0 756,656 - DZA65_RS03600 0.54 -0.6 756,690 + DZA65_RS03600 0.56 -1.8 756,690 + DZA65_RS03600 0.56 -0.3 756,691 - DZA65_RS03600 0.56 -0.0 756,696 + DZA65_RS03600 0.57 +0.4 756,760 - DZA65_RS03600 0.61 -0.1 756,831 + DZA65_RS03600 0.67 -0.1 756,832 - +0.9 756,832 - DZA65_RS03600 0.67 -0.0 756,865 - DZA65_RS03600 0.69 -0.6 756,936 - DZA65_RS03600 0.74 -1.0 756,940 - DZA65_RS03600 0.74 +1.4 756,940 - DZA65_RS03600 0.74 -0.2 757,006 + DZA65_RS03600 0.79 -0.4 757,007 - DZA65_RS03600 0.79 -0.1 757,032 + DZA65_RS03600 0.81 -0.9 757,033 - DZA65_RS03600 0.81 -0.7 757,033 - DZA65_RS03600 0.81 -0.3 757,065 + DZA65_RS03600 0.83 -0.4 757,066 - DZA65_RS03600 0.84 -1.1 757,066 - DZA65_RS03600 0.84 -1.9 757,112 + DZA65_RS03600 0.87 -0.1 757,119 - DZA65_RS03600 0.87 +0.2 757,142 + DZA65_RS03600 0.89 -0.4 757,143 - DZA65_RS03600 0.89 -0.0 757,166 - -0.0 757,227 + -1.1 757,231 + -0.5 757,418 - DZA65_RS03605 0.27 -1.3 757,483 + DZA65_RS03605 0.45 -0.8 757,582 + DZA65_RS03605 0.73 +0.1 757,718 + +0.4 757,873 + -0.8 757,873 + -0.1 757,878 - +0.6 757,983 + DZA65_RS03610 0.15 -0.6 758,005 - DZA65_RS03610 0.17 +0.6 758,029 + DZA65_RS03610 0.19 +0.4 758,029 + DZA65_RS03610 0.19 +1.2 758,030 - DZA65_RS03610 0.19 -1.3 758,137 + DZA65_RS03610 0.27 +0.5 758,138 - DZA65_RS03610 0.27 -0.3 758,138 - DZA65_RS03610 0.27 -0.4 758,164 - DZA65_RS03610 0.29 -0.6 758,164 - DZA65_RS03610 0.29 -0.6 758,167 + DZA65_RS03610 0.29 -1.5 758,168 - DZA65_RS03610 0.29 -0.9 758,168 - DZA65_RS03610 0.29 -2.1 758,168 - DZA65_RS03610 0.29 +0.5 758,169 + DZA65_RS03610 0.29 +0.2 758,170 - DZA65_RS03610 0.30 +0.9 758,176 + +0.9 758,177 - DZA65_RS03610 0.30 -0.1 758,227 + DZA65_RS03610 0.34 +0.0 758,355 + DZA65_RS03610 0.44 +0.7 758,364 - DZA65_RS03610 0.45 +0.1 758,451 + DZA65_RS03610 0.51 -0.2 758,451 + DZA65_RS03610 0.51 -1.1 758,460 + DZA65_RS03610 0.52 +0.0 758,460 + DZA65_RS03610 0.52 -0.6 758,460 + DZA65_RS03610 0.52 +0.0 758,460 + DZA65_RS03610 0.52 +0.1 758,460 + DZA65_RS03610 0.52 -0.6 758,460 + DZA65_RS03610 0.52 -0.7 758,460 + DZA65_RS03610 0.52 +0.6 758,461 - DZA65_RS03610 0.52 -0.6 758,462 + DZA65_RS03610 0.52 -0.6 758,462 + DZA65_RS03610 0.52 +0.4 758,462 + DZA65_RS03610 0.52 -0.0 758,462 + DZA65_RS03610 0.52 -0.0 758,462 + DZA65_RS03610 0.52 -0.7 758,462 + DZA65_RS03610 0.52 +1.5 758,462 + DZA65_RS03610 0.52 -0.4 758,462 + DZA65_RS03610 0.52 +1.2 758,462 + DZA65_RS03610 0.52 -0.8 758,462 + DZA65_RS03610 0.52 -0.9 758,462 + DZA65_RS03610 0.52 -0.5 758,462 + DZA65_RS03610 0.52 -2.8 758,463 - DZA65_RS03610 0.52 -0.2 758,463 - DZA65_RS03610 0.52 +1.8 758,463 - DZA65_RS03610 0.52 -0.3 758,463 - DZA65_RS03610 0.52 +0.2 758,463 - DZA65_RS03610 0.52 +1.4 758,463 - DZA65_RS03610 0.52 +0.9 758,463 - DZA65_RS03610 0.52 +0.4 758,463 - DZA65_RS03610 0.52 +0.9 758,463 - DZA65_RS03610 0.52 -0.1 758,463 - DZA65_RS03610 0.52 -1.9 758,463 - DZA65_RS03610 0.52 -0.8 758,463 - DZA65_RS03610 0.52 +1.4 758,476 - DZA65_RS03610 0.53 +0.4 758,505 + DZA65_RS03610 0.56 +1.5 758,506 - DZA65_RS03610 0.56 +0.3 758,517 + DZA65_RS03610 0.56 -0.7 758,517 + DZA65_RS03610 0.56 -0.2 758,517 + DZA65_RS03610 0.56 -0.7 758,535 - DZA65_RS03610 0.58 -0.1 758,587 + DZA65_RS03610 0.62 -0.2 758,587 + DZA65_RS03610 0.62 -1.8 758,588 - DZA65_RS03610 0.62 +1.2 758,601 + DZA65_RS03610 0.63 +0.4 758,602 - DZA65_RS03610 0.63 +1.2
Or see this region's nucleotide sequence