Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS02370 and DZA65_RS02375 are separated by 408 nucleotides DZA65_RS02375 and DZA65_RS02380 are separated by 132 nucleotides
DZA65_RS02370: DZA65_RS02370 - MFS transporter, at 510,954 to 512,186
_RS02370
DZA65_RS02375: DZA65_RS02375 - HD domain-containing protein, at 512,595 to 513,305
_RS02375
DZA65_RS02380: DZA65_RS02380 - IclR family transcriptional regulator, at 513,438 to 514,244
_RS02380
Position (kb) 512
513
514 Strain fitness (log2 ratio) -2
-1
0
1
2 at 511.663 kb on + strand, within DZA65_RS02370 at 511.678 kb on - strand, within DZA65_RS02370 at 511.678 kb on - strand, within DZA65_RS02370 at 511.681 kb on + strand, within DZA65_RS02370 at 511.681 kb on + strand, within DZA65_RS02370 at 511.682 kb on - strand, within DZA65_RS02370 at 511.682 kb on - strand, within DZA65_RS02370 at 511.682 kb on - strand, within DZA65_RS02370 at 511.682 kb on - strand, within DZA65_RS02370 at 511.682 kb on - strand, within DZA65_RS02370 at 511.699 kb on + strand, within DZA65_RS02370 at 511.699 kb on + strand, within DZA65_RS02370 at 511.699 kb on + strand, within DZA65_RS02370 at 511.699 kb on + strand, within DZA65_RS02370 at 511.699 kb on + strand, within DZA65_RS02370 at 511.699 kb on + strand, within DZA65_RS02370 at 511.700 kb on - strand, within DZA65_RS02370 at 511.700 kb on - strand, within DZA65_RS02370 at 511.700 kb on - strand, within DZA65_RS02370 at 511.700 kb on - strand, within DZA65_RS02370 at 511.700 kb on - strand, within DZA65_RS02370 at 511.700 kb on - strand, within DZA65_RS02370 at 511.726 kb on + strand, within DZA65_RS02370 at 511.726 kb on + strand, within DZA65_RS02370 at 511.726 kb on + strand, within DZA65_RS02370 at 511.726 kb on + strand, within DZA65_RS02370 at 511.727 kb on - strand, within DZA65_RS02370 at 511.727 kb on - strand, within DZA65_RS02370 at 511.727 kb on - strand, within DZA65_RS02370 at 511.727 kb on - strand, within DZA65_RS02370 at 511.727 kb on - strand, within DZA65_RS02370 at 511.905 kb on + strand, within DZA65_RS02370 at 511.906 kb on - strand, within DZA65_RS02370 at 511.906 kb on - strand, within DZA65_RS02370 at 511.982 kb on + strand, within DZA65_RS02370 at 512.042 kb on + strand, within DZA65_RS02370 at 512.042 kb on + strand, within DZA65_RS02370 at 512.058 kb on + strand, within DZA65_RS02370 at 512.059 kb on - strand, within DZA65_RS02370 at 512.065 kb on + strand at 512.065 kb on + strand at 512.066 kb on - strand at 512.066 kb on - strand at 512.066 kb on - strand at 512.066 kb on - strand at 512.080 kb on + strand at 512.080 kb on + strand at 512.081 kb on - strand at 512.081 kb on - strand at 512.081 kb on - strand at 512.104 kb on + strand at 512.104 kb on + strand at 512.105 kb on - strand at 512.191 kb on + strand at 512.191 kb on + strand at 512.192 kb on - strand at 512.192 kb on - strand at 512.195 kb on + strand at 512.195 kb on + strand at 512.195 kb on + strand at 512.195 kb on + strand at 512.196 kb on - strand at 512.222 kb on + strand at 512.228 kb on + strand at 512.229 kb on - strand at 512.303 kb on + strand at 512.304 kb on - strand at 512.304 kb on - strand at 512.304 kb on - strand at 512.317 kb on - strand at 512.320 kb on + strand at 512.321 kb on + strand at 512.322 kb on - strand at 512.394 kb on + strand at 512.395 kb on - strand at 512.395 kb on - strand at 512.395 kb on - strand at 512.406 kb on + strand at 512.407 kb on - strand at 512.408 kb on + strand at 512.408 kb on + strand at 512.408 kb on + strand at 512.412 kb on - strand at 512.412 kb on - strand at 512.492 kb on + strand at 512.493 kb on - strand at 512.507 kb on + strand at 512.551 kb on - strand at 512.551 kb on - strand at 512.554 kb on + strand at 512.554 kb on + strand at 512.555 kb on - strand at 512.555 kb on - strand at 512.555 kb on - strand at 512.569 kb on + strand at 512.569 kb on + strand at 512.569 kb on + strand at 512.569 kb on + strand at 512.569 kb on + strand at 512.569 kb on + strand at 512.569 kb on + strand at 512.569 kb on + strand at 512.570 kb on - strand at 512.570 kb on - strand at 512.570 kb on - strand at 512.570 kb on - strand at 512.570 kb on - strand at 512.570 kb on - strand at 512.570 kb on - strand at 512.570 kb on - strand at 512.570 kb on - strand at 512.570 kb on - strand at 512.602 kb on + strand at 512.602 kb on + strand at 512.624 kb on + strand at 512.625 kb on - strand at 512.625 kb on - strand at 512.631 kb on + strand at 512.631 kb on + strand at 512.631 kb on + strand at 512.631 kb on + strand at 512.632 kb on - strand at 512.632 kb on - strand at 512.632 kb on - strand at 512.632 kb on - strand at 512.632 kb on - strand at 512.636 kb on - strand at 512.636 kb on - strand at 512.636 kb on - strand at 512.884 kb on + strand, within DZA65_RS02375 at 512.884 kb on + strand, within DZA65_RS02375 at 512.884 kb on + strand at 512.884 kb on + strand, within DZA65_RS02375 at 512.884 kb on + strand, within DZA65_RS02375 at 512.884 kb on + strand, within DZA65_RS02375 at 512.884 kb on + strand, within DZA65_RS02375 at 512.885 kb on - strand, within DZA65_RS02375 at 512.885 kb on - strand, within DZA65_RS02375 at 512.933 kb on + strand, within DZA65_RS02375 at 512.936 kb on + strand, within DZA65_RS02375 at 513.021 kb on + strand, within DZA65_RS02375 at 513.021 kb on + strand, within DZA65_RS02375 at 513.021 kb on + strand, within DZA65_RS02375 at 513.022 kb on - strand, within DZA65_RS02375 at 513.022 kb on - strand at 513.022 kb on - strand, within DZA65_RS02375 at 513.022 kb on - strand, within DZA65_RS02375 at 513.022 kb on - strand, within DZA65_RS02375 at 513.102 kb on + strand, within DZA65_RS02375 at 513.102 kb on + strand, within DZA65_RS02375 at 513.103 kb on - strand, within DZA65_RS02375 at 513.167 kb on + strand, within DZA65_RS02375 at 513.350 kb on + strand at 513.350 kb on + strand at 513.350 kb on + strand at 513.350 kb on + strand at 513.350 kb on + strand at 513.350 kb on + strand at 513.351 kb on - strand at 513.351 kb on - strand at 513.351 kb on - strand at 513.351 kb on - strand at 513.359 kb on + strand at 513.360 kb on - strand at 513.360 kb on - strand at 513.360 kb on - strand at 513.360 kb on - strand at 513.360 kb on - strand at 513.360 kb on - strand at 513.383 kb on + strand at 513.383 kb on + strand at 513.383 kb on + strand at 513.384 kb on - strand at 513.384 kb on - strand at 513.384 kb on - strand at 513.384 kb on - strand at 513.384 kb on - strand at 513.384 kb on - strand at 513.384 kb on - strand at 513.384 kb on - strand at 513.399 kb on + strand at 513.464 kb on + strand at 513.464 kb on + strand at 513.464 kb on + strand at 513.464 kb on + strand at 513.465 kb on - strand at 513.465 kb on - strand at 513.465 kb on - strand at 513.465 kb on - strand at 513.514 kb on + strand at 513.515 kb on - strand at 513.515 kb on - strand at 513.515 kb on - strand at 513.517 kb on + strand at 513.517 kb on + strand at 513.517 kb on + strand at 513.517 kb on + strand at 513.517 kb on + strand at 513.517 kb on + strand at 513.517 kb on + strand at 513.517 kb on + strand at 513.518 kb on - strand at 513.518 kb on - strand at 513.518 kb on - strand at 513.518 kb on - strand at 513.518 kb on - strand at 513.518 kb on - strand at 513.518 kb on - strand at 513.518 kb on - strand at 513.525 kb on + strand, within DZA65_RS02380 at 513.526 kb on - strand, within DZA65_RS02380 at 513.651 kb on + strand, within DZA65_RS02380 at 513.651 kb on + strand, within DZA65_RS02380 at 513.651 kb on + strand, within DZA65_RS02380 at 513.792 kb on + strand, within DZA65_RS02380 at 513.793 kb on - strand, within DZA65_RS02380 at 513.830 kb on + strand, within DZA65_RS02380 at 513.830 kb on + strand, within DZA65_RS02380 at 513.830 kb on + strand, within DZA65_RS02380 at 513.831 kb on - strand, within DZA65_RS02380 at 513.831 kb on - strand, within DZA65_RS02380 at 513.831 kb on - strand, within DZA65_RS02380 at 513.849 kb on + strand at 513.849 kb on + strand, within DZA65_RS02380 at 513.850 kb on - strand, within DZA65_RS02380 at 513.850 kb on - strand, within DZA65_RS02380 at 513.975 kb on + strand, within DZA65_RS02380 at 513.976 kb on - strand, within DZA65_RS02380 at 513.976 kb on - strand, within DZA65_RS02380 at 513.977 kb on + strand, within DZA65_RS02380 at 513.977 kb on + strand, within DZA65_RS02380 at 513.978 kb on - strand, within DZA65_RS02380 at 513.978 kb on - strand, within DZA65_RS02380 at 513.978 kb on - strand, within DZA65_RS02380 at 513.983 kb on + strand, within DZA65_RS02380 at 514.090 kb on + strand, within DZA65_RS02380 at 514.090 kb on + strand, within DZA65_RS02380 at 514.116 kb on + strand, within DZA65_RS02380 at 514.116 kb on + strand, within DZA65_RS02380 at 514.116 kb on + strand, within DZA65_RS02380 at 514.117 kb on - strand, within DZA65_RS02380 at 514.242 kb on + strand at 514.242 kb on + strand at 514.242 kb on + strand at 514.242 kb on + strand at 514.242 kb on + strand at 514.242 kb on + strand at 514.242 kb on + strand at 514.242 kb on + strand at 514.242 kb on + strand at 514.242 kb on + strand at 514.242 kb on + strand at 514.243 kb on - strand at 514.243 kb on - strand at 514.243 kb on - strand at 514.243 kb on - strand at 514.243 kb on - strand at 514.243 kb on - strand at 514.243 kb on - strand at 514.246 kb on + strand at 514.247 kb on - strand at 514.247 kb on - strand at 514.247 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 511,663 + DZA65_RS02370 0.58 +0.6 511,678 - DZA65_RS02370 0.59 +0.2 511,678 - DZA65_RS02370 0.59 -0.5 511,681 + DZA65_RS02370 0.59 +0.3 511,681 + DZA65_RS02370 0.59 +1.3 511,682 - DZA65_RS02370 0.59 +0.0 511,682 - DZA65_RS02370 0.59 -0.4 511,682 - DZA65_RS02370 0.59 -0.2 511,682 - DZA65_RS02370 0.59 +1.4 511,682 - DZA65_RS02370 0.59 +1.1 511,699 + DZA65_RS02370 0.60 +0.1 511,699 + DZA65_RS02370 0.60 -0.6 511,699 + DZA65_RS02370 0.60 -0.3 511,699 + DZA65_RS02370 0.60 -0.6 511,699 + DZA65_RS02370 0.60 +1.3 511,699 + DZA65_RS02370 0.60 +0.1 511,700 - DZA65_RS02370 0.61 +0.4 511,700 - DZA65_RS02370 0.61 -0.2 511,700 - DZA65_RS02370 0.61 +1.9 511,700 - DZA65_RS02370 0.61 -0.2 511,700 - DZA65_RS02370 0.61 +0.2 511,700 - DZA65_RS02370 0.61 +1.3 511,726 + DZA65_RS02370 0.63 -0.4 511,726 + DZA65_RS02370 0.63 +1.6 511,726 + DZA65_RS02370 0.63 +0.3 511,726 + DZA65_RS02370 0.63 -0.1 511,727 - DZA65_RS02370 0.63 -0.3 511,727 - DZA65_RS02370 0.63 +0.1 511,727 - DZA65_RS02370 0.63 -0.3 511,727 - DZA65_RS02370 0.63 +0.1 511,727 - DZA65_RS02370 0.63 +0.6 511,905 + DZA65_RS02370 0.77 +0.0 511,906 - DZA65_RS02370 0.77 -0.1 511,906 - DZA65_RS02370 0.77 +0.9 511,982 + DZA65_RS02370 0.83 +0.7 512,042 + DZA65_RS02370 0.88 -0.6 512,042 + DZA65_RS02370 0.88 +0.3 512,058 + DZA65_RS02370 0.90 -0.1 512,059 - DZA65_RS02370 0.90 -1.6 512,065 + -0.4 512,065 + -0.6 512,066 - -0.2 512,066 - -0.7 512,066 - +0.5 512,066 - +0.6 512,080 + -0.3 512,080 + +2.3 512,081 - +0.2 512,081 - -1.3 512,081 - -0.7 512,104 + -0.0 512,104 + -2.1 512,105 - +0.5 512,191 + +1.6 512,191 + +0.2 512,192 - -1.7 512,192 - +0.3 512,195 + -2.1 512,195 + -0.6 512,195 + -1.5 512,195 + +0.0 512,196 - -1.3 512,222 + +0.0 512,228 + -2.2 512,229 - -0.3 512,303 + -0.4 512,304 - -0.9 512,304 - -0.1 512,304 - +0.3 512,317 - +0.3 512,320 + -0.3 512,321 + +0.7 512,322 - -0.4 512,394 + -0.5 512,395 - -0.4 512,395 - -0.1 512,395 - +0.4 512,406 + -0.2 512,407 - -0.3 512,408 + +0.1 512,408 + -1.9 512,408 + +0.4 512,412 - +0.9 512,412 - -0.3 512,492 + -1.3 512,493 - +0.3 512,507 + +0.9 512,551 - -1.3 512,551 - +0.5 512,554 + -1.3 512,554 + -0.1 512,555 - +1.6 512,555 - -1.7 512,555 - -0.0 512,569 + -0.8 512,569 + -0.8 512,569 + -0.0 512,569 + -1.2 512,569 + -0.1 512,569 + -0.6 512,569 + -0.8 512,569 + -0.3 512,570 - -0.2 512,570 - -2.1 512,570 - +0.3 512,570 - +0.3 512,570 - -0.1 512,570 - +0.1 512,570 - +0.2 512,570 - +1.3 512,570 - +0.3 512,570 - -0.5 512,602 + +0.2 512,602 + -0.9 512,624 + +0.4 512,625 - +1.7 512,625 - -0.9 512,631 + -0.3 512,631 + -0.7 512,631 + +0.2 512,631 + -0.4 512,632 - +0.2 512,632 - +0.0 512,632 - +0.0 512,632 - +2.0 512,632 - -0.3 512,636 - -1.9 512,636 - -0.5 512,636 - -1.9 512,884 + DZA65_RS02375 0.41 -1.5 512,884 + DZA65_RS02375 0.41 -0.6 512,884 + +0.7 512,884 + DZA65_RS02375 0.41 -1.3 512,884 + DZA65_RS02375 0.41 -1.7 512,884 + DZA65_RS02375 0.41 +0.7 512,884 + DZA65_RS02375 0.41 -0.3 512,885 - DZA65_RS02375 0.41 -0.1 512,885 - DZA65_RS02375 0.41 +0.6 512,933 + DZA65_RS02375 0.48 -1.9 512,936 + DZA65_RS02375 0.48 -0.8 513,021 + DZA65_RS02375 0.60 -1.3 513,021 + DZA65_RS02375 0.60 -1.5 513,021 + DZA65_RS02375 0.60 -0.5 513,022 - DZA65_RS02375 0.60 +0.3 513,022 - -1.3 513,022 - DZA65_RS02375 0.60 -1.1 513,022 - DZA65_RS02375 0.60 -0.5 513,022 - DZA65_RS02375 0.60 +0.3 513,102 + DZA65_RS02375 0.71 +1.0 513,102 + DZA65_RS02375 0.71 -1.0 513,103 - DZA65_RS02375 0.71 -0.3 513,167 + DZA65_RS02375 0.80 +0.7 513,350 + +0.3 513,350 + -0.1 513,350 + -1.0 513,350 + -0.2 513,350 + +1.3 513,350 + -0.5 513,351 - +0.1 513,351 - -0.1 513,351 - +0.5 513,351 - -0.4 513,359 + -0.4 513,360 - -0.1 513,360 - +1.3 513,360 - -0.9 513,360 - -0.8 513,360 - -1.3 513,360 - -0.7 513,383 + -0.1 513,383 + -0.5 513,383 + -0.2 513,384 - +0.4 513,384 - +0.5 513,384 - -0.7 513,384 - -0.5 513,384 - -0.6 513,384 - +0.5 513,384 - -1.9 513,384 - +0.9 513,399 + -0.6 513,464 + -0.0 513,464 + +0.5 513,464 + +1.0 513,464 + +0.0 513,465 - +0.1 513,465 - -0.1 513,465 - +1.8 513,465 - +1.3 513,514 + -0.6 513,515 - +0.7 513,515 - -0.5 513,515 - +0.3 513,517 + -0.4 513,517 + +0.3 513,517 + +0.4 513,517 + -0.5 513,517 + +0.2 513,517 + -1.3 513,517 + -0.7 513,517 + -0.7 513,518 - -0.9 513,518 - -0.3 513,518 - +1.7 513,518 - -0.7 513,518 - +0.0 513,518 - +0.3 513,518 - +0.7 513,518 - +0.9 513,525 + DZA65_RS02380 0.11 -0.3 513,526 - DZA65_RS02380 0.11 -0.6 513,651 + DZA65_RS02380 0.26 +0.9 513,651 + DZA65_RS02380 0.26 +0.1 513,651 + DZA65_RS02380 0.26 -0.2 513,792 + DZA65_RS02380 0.44 -0.9 513,793 - DZA65_RS02380 0.44 +0.3 513,830 + DZA65_RS02380 0.49 -1.6 513,830 + DZA65_RS02380 0.49 -1.1 513,830 + DZA65_RS02380 0.49 -0.5 513,831 - DZA65_RS02380 0.49 +0.8 513,831 - DZA65_RS02380 0.49 +0.1 513,831 - DZA65_RS02380 0.49 -0.7 513,849 + -0.3 513,849 + DZA65_RS02380 0.51 +0.3 513,850 - DZA65_RS02380 0.51 -0.9 513,850 - DZA65_RS02380 0.51 -0.7 513,975 + DZA65_RS02380 0.67 +0.9 513,976 - DZA65_RS02380 0.67 -1.7 513,976 - DZA65_RS02380 0.67 -0.8 513,977 + DZA65_RS02380 0.67 -0.1 513,977 + DZA65_RS02380 0.67 -0.8 513,978 - DZA65_RS02380 0.67 -0.0 513,978 - DZA65_RS02380 0.67 +0.3 513,978 - DZA65_RS02380 0.67 +0.3 513,983 + DZA65_RS02380 0.68 +0.0 514,090 + DZA65_RS02380 0.81 -1.3 514,090 + DZA65_RS02380 0.81 +0.6 514,116 + DZA65_RS02380 0.84 -0.6 514,116 + DZA65_RS02380 0.84 -0.6 514,116 + DZA65_RS02380 0.84 +0.8 514,117 - DZA65_RS02380 0.84 -0.8 514,242 + -1.1 514,242 + -0.9 514,242 + -0.7 514,242 + -0.6 514,242 + +1.1 514,242 + +0.1 514,242 + -0.9 514,242 + +0.3 514,242 + -0.6 514,242 + +0.2 514,242 + +0.2 514,243 - +2.3 514,243 - +0.0 514,243 - +0.5 514,243 - -2.1 514,243 - -0.6 514,243 - -1.0 514,243 - +1.1 514,246 + +0.5 514,247 - +0.3 514,247 - +0.0 514,247 - +0.8
Or see this region's nucleotide sequence