Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS21755 and DZA65_RS21760 overlap by 11 nucleotides DZA65_RS21760 and DZA65_RS21765 are separated by 5 nucleotides
DZA65_RS21755: DZA65_RS21755 - cell division protein FtsX, at 4,705,679 to 4,706,650
_RS21755
DZA65_RS21760: DZA65_RS21760 - cell division ATP-binding protein FtsE, at 4,706,640 to 4,707,308
_RS21760
DZA65_RS21765: DZA65_RS21765 - signal recognition particle-docking protein FtsY, at 4,707,314 to 4,708,690
_RS21765
Position (kb)
4706
4707
4708 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4705.643 kb on - strand at 4705.645 kb on - strand at 4705.673 kb on + strand at 4705.674 kb on - strand at 4705.700 kb on + strand at 4705.700 kb on + strand at 4705.700 kb on + strand at 4705.700 kb on + strand at 4705.701 kb on - strand at 4705.958 kb on - strand, within DZA65_RS21755 at 4706.126 kb on + strand, within DZA65_RS21755 at 4706.126 kb on + strand, within DZA65_RS21755 at 4706.127 kb on - strand, within DZA65_RS21755 at 4706.248 kb on + strand, within DZA65_RS21755 at 4706.313 kb on + strand, within DZA65_RS21755 at 4706.313 kb on + strand, within DZA65_RS21755 at 4706.313 kb on + strand, within DZA65_RS21755 at 4706.313 kb on + strand, within DZA65_RS21755 at 4706.313 kb on + strand, within DZA65_RS21755 at 4706.313 kb on + strand, within DZA65_RS21755 at 4706.313 kb on + strand, within DZA65_RS21755 at 4706.313 kb on + strand, within DZA65_RS21755 at 4706.313 kb on + strand, within DZA65_RS21755 at 4706.314 kb on - strand, within DZA65_RS21755 at 4706.314 kb on - strand, within DZA65_RS21755 at 4706.314 kb on - strand, within DZA65_RS21755 at 4706.314 kb on - strand, within DZA65_RS21755 at 4706.314 kb on - strand, within DZA65_RS21755 at 4706.314 kb on - strand at 4706.317 kb on + strand, within DZA65_RS21755 at 4706.317 kb on + strand, within DZA65_RS21755 at 4706.317 kb on + strand, within DZA65_RS21755 at 4706.317 kb on + strand, within DZA65_RS21755 at 4706.317 kb on + strand, within DZA65_RS21755 at 4706.318 kb on - strand, within DZA65_RS21755 at 4706.318 kb on - strand, within DZA65_RS21755 at 4706.318 kb on - strand, within DZA65_RS21755 at 4706.318 kb on - strand, within DZA65_RS21755 at 4706.318 kb on - strand, within DZA65_RS21755 at 4706.389 kb on + strand, within DZA65_RS21755 at 4706.397 kb on + strand, within DZA65_RS21755 at 4706.397 kb on + strand, within DZA65_RS21755 at 4706.397 kb on + strand, within DZA65_RS21755 at 4706.421 kb on + strand, within DZA65_RS21755 at 4706.463 kb on + strand, within DZA65_RS21755 at 4706.463 kb on + strand, within DZA65_RS21755 at 4706.464 kb on - strand, within DZA65_RS21755 at 4706.464 kb on - strand at 4706.464 kb on - strand, within DZA65_RS21755 at 4706.638 kb on + strand at 4706.642 kb on - strand at 4706.642 kb on - strand at 4706.783 kb on + strand, within DZA65_RS21760 at 4706.783 kb on + strand, within DZA65_RS21760 at 4706.784 kb on - strand, within DZA65_RS21760 at 4706.846 kb on + strand, within DZA65_RS21760 at 4706.847 kb on - strand, within DZA65_RS21760 at 4706.847 kb on - strand, within DZA65_RS21760 at 4706.847 kb on - strand, within DZA65_RS21760 at 4707.019 kb on + strand, within DZA65_RS21760 at 4707.019 kb on + strand, within DZA65_RS21760 at 4707.019 kb on + strand, within DZA65_RS21760 at 4707.020 kb on - strand, within DZA65_RS21760 at 4707.020 kb on - strand, within DZA65_RS21760 at 4707.020 kb on - strand, within DZA65_RS21760 at 4707.113 kb on + strand, within DZA65_RS21760 at 4707.182 kb on + strand at 4707.183 kb on - strand, within DZA65_RS21760 at 4707.216 kb on + strand, within DZA65_RS21760 at 4707.216 kb on + strand, within DZA65_RS21760 at 4707.277 kb on + strand at 4707.277 kb on + strand at 4707.278 kb on - strand at 4707.278 kb on - strand at 4707.287 kb on + strand at 4707.315 kb on + strand at 4707.315 kb on + strand at 4707.316 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 4,705,643 - -1.7 4,705,645 - +0.2 4,705,673 + -0.6 4,705,674 - +0.2 4,705,700 + +0.4 4,705,700 + +0.5 4,705,700 + +0.6 4,705,700 + -0.1 4,705,701 - +1.2 4,705,958 - DZA65_RS21755 0.29 -1.3 4,706,126 + DZA65_RS21755 0.46 +0.8 4,706,126 + DZA65_RS21755 0.46 +0.2 4,706,127 - DZA65_RS21755 0.46 +0.1 4,706,248 + DZA65_RS21755 0.59 -0.6 4,706,313 + DZA65_RS21755 0.65 +1.0 4,706,313 + DZA65_RS21755 0.65 +0.2 4,706,313 + DZA65_RS21755 0.65 -0.7 4,706,313 + DZA65_RS21755 0.65 +0.7 4,706,313 + DZA65_RS21755 0.65 -0.4 4,706,313 + DZA65_RS21755 0.65 -2.2 4,706,313 + DZA65_RS21755 0.65 +0.1 4,706,313 + DZA65_RS21755 0.65 +0.0 4,706,313 + DZA65_RS21755 0.65 +0.3 4,706,314 - DZA65_RS21755 0.65 -1.0 4,706,314 - DZA65_RS21755 0.65 +0.6 4,706,314 - DZA65_RS21755 0.65 +0.6 4,706,314 - DZA65_RS21755 0.65 -0.4 4,706,314 - DZA65_RS21755 0.65 +0.8 4,706,314 - +0.0 4,706,317 + DZA65_RS21755 0.66 -0.6 4,706,317 + DZA65_RS21755 0.66 +0.3 4,706,317 + DZA65_RS21755 0.66 -1.4 4,706,317 + DZA65_RS21755 0.66 +1.0 4,706,317 + DZA65_RS21755 0.66 +0.2 4,706,318 - DZA65_RS21755 0.66 +1.6 4,706,318 - DZA65_RS21755 0.66 -0.6 4,706,318 - DZA65_RS21755 0.66 +0.2 4,706,318 - DZA65_RS21755 0.66 +0.0 4,706,318 - DZA65_RS21755 0.66 +2.0 4,706,389 + DZA65_RS21755 0.73 +0.1 4,706,397 + DZA65_RS21755 0.74 -0.6 4,706,397 + DZA65_RS21755 0.74 -0.4 4,706,397 + DZA65_RS21755 0.74 +1.6 4,706,421 + DZA65_RS21755 0.76 -0.7 4,706,463 + DZA65_RS21755 0.81 -1.2 4,706,463 + DZA65_RS21755 0.81 +1.0 4,706,464 - DZA65_RS21755 0.81 -0.0 4,706,464 - +0.3 4,706,464 - DZA65_RS21755 0.81 -0.4 4,706,638 + +0.9 4,706,642 - +1.1 4,706,642 - -0.7 4,706,783 + DZA65_RS21760 0.21 +0.0 4,706,783 + DZA65_RS21760 0.21 +0.5 4,706,784 - DZA65_RS21760 0.22 -0.2 4,706,846 + DZA65_RS21760 0.31 +0.3 4,706,847 - DZA65_RS21760 0.31 +0.3 4,706,847 - DZA65_RS21760 0.31 -1.1 4,706,847 - DZA65_RS21760 0.31 +0.3 4,707,019 + DZA65_RS21760 0.57 -0.6 4,707,019 + DZA65_RS21760 0.57 -0.7 4,707,019 + DZA65_RS21760 0.57 -0.4 4,707,020 - DZA65_RS21760 0.57 -0.8 4,707,020 - DZA65_RS21760 0.57 -0.4 4,707,020 - DZA65_RS21760 0.57 -1.2 4,707,113 + DZA65_RS21760 0.71 -2.5 4,707,182 + +0.0 4,707,183 - DZA65_RS21760 0.81 -0.6 4,707,216 + DZA65_RS21760 0.86 +1.2 4,707,216 + DZA65_RS21760 0.86 -1.4 4,707,277 + -1.4 4,707,277 + +0.5 4,707,278 - -0.4 4,707,278 - -1.0 4,707,287 + +0.4 4,707,315 + +1.0 4,707,315 + +1.0 4,707,316 - -0.8
Or see this region's nucleotide sequence