Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21110

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,562,436	-				-0.8
4,562,436	-				-1.2
4,562,455	-				+0.8
4,562,501	-		DZA65_RS21105	0.20	-1.2
4,562,636	-				-1.1
4,562,653	+				-0.4
4,562,654	-				+1.0
4,562,654	-				+0.6
4,562,654	-				-1.0
4,562,654	-				-0.2
4,562,657	+				-1.5
4,562,657	+				-1.4
4,562,657	+				-1.6
4,562,657	+				-0.4
4,562,657	+				+1.6
4,562,657	+				-2.1
4,562,657	+				-1.4
4,562,657	+				-1.3
4,562,657	+				-1.6
4,562,657	+				-1.2
4,562,658	-				-0.6
4,562,658	-				-0.0
4,562,658	-				-1.4
4,562,658	-				-1.6
4,562,658	-				+0.4
4,562,658	-				-0.8
4,562,658	-				-0.4
4,562,658	-				+0.2
4,562,658	-				-0.2
4,562,658	-				-1.1
4,562,658	-				-0.8
4,562,658	-				-0.1
4,562,658	-				+1.1
4,562,658	-				-1.0
4,562,658	-				+0.1
4,562,658	-				+1.3
4,562,658	-				-0.8
4,562,658	-				-0.9
4,562,658	-				-0.6
4,562,658	-				+0.2
4,562,658	-				+2.6
4,562,658	-				-0.8
4,562,658	-				-1.8
4,562,658	-				-0.2
4,562,658	-				+0.1
4,562,658	-				+1.1
4,562,658	-				+0.4
4,562,658	-				-0.8
4,562,658	-				+0.6
4,562,658	-				-0.8
4,562,658	-				+0.8
4,562,658	-				+0.7
4,562,666	+				+0.2
4,562,667	-				-0.8
4,562,667	-				-1.0
4,562,667	-				-0.1
4,562,667	-				-0.2
4,562,667	-				+0.6
4,562,667	-				-0.4
4,562,695	+				+0.1
4,562,696	-				+0.6
4,562,696	-				-0.2
4,562,706	+				+0.7
4,562,706	+				+0.6
4,562,750	+		DZA65_RS21110	0.13	-0.1
4,562,750	+		DZA65_RS21110	0.13	-0.4
4,562,800	+		DZA65_RS21110	0.29	-0.0
4,562,911	+		DZA65_RS21110	0.64	-0.4
4,562,923	+		DZA65_RS21110	0.67	+0.2
4,562,923	+		DZA65_RS21110	0.67	-0.3
4,562,923	+		DZA65_RS21110	0.67	-1.2
4,562,924	-		DZA65_RS21110	0.68	+1.1
4,562,924	-		DZA65_RS21110	0.68	-1.1
4,562,924	-		DZA65_RS21110	0.68	-0.6
4,562,932	-		DZA65_RS21110	0.70	-0.3
4,563,016	+				-0.4
4,563,017	-				-1.0
4,563,017	-				-0.4
4,563,062	+				-1.6
4,563,062	+				-0.8
4,563,062	+				-1.2
4,563,062	+				+1.1
4,563,188	+				-2.5
4,563,188	+				-0.4
4,563,188	+				-0.0
4,563,188	+				-0.1
4,563,188	+				-1.8
4,563,188	+				-2.3
4,563,188	+				+0.3
4,563,189	-				-0.2
4,563,189	-				+0.1
4,563,189	-				+1.6
4,563,189	-				+0.7
4,563,189	-				-0.4
4,563,189	-				-1.8
4,563,189	-				+0.2
4,563,189	-				+0.8
4,563,189	-				-0.1
4,563,189	-				-0.7
4,563,256	-				-1.4
4,563,294	+				-0.8
4,563,294	+				-0.4
4,563,295	-				+0.5
4,563,299	-				+1.0
4,563,375	+				-1.4
4,563,375	+				-3.1
4,563,376	-				+1.0
4,563,408	+		DZA65_RS21115	0.11	-0.4
4,563,408	+		DZA65_RS21115	0.11	-0.1
4,563,408	+		DZA65_RS21115	0.11	-0.6
4,563,409	-		DZA65_RS21115	0.11	-1.5
4,563,409	-		DZA65_RS21115	0.11	-2.3
4,563,409	-		DZA65_RS21115	0.11	-0.4
4,563,409	-		DZA65_RS21115	0.11	-1.2
4,563,409	-		DZA65_RS21115	0.11	-1.4
4,563,409	-		DZA65_RS21115	0.11	+0.6
4,563,409	-		DZA65_RS21115	0.11	-0.8
4,563,412	+		DZA65_RS21115	0.11	+0.3
4,563,689	+		DZA65_RS21115	0.22	-1.2
4,563,690	-		DZA65_RS21115	0.22	-0.8
4,563,690	-		DZA65_RS21115	0.22	+1.2
4,563,697	+		DZA65_RS21115	0.22	-3.1