Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19180

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,145,936	+		DZA65_RS19175	0.27	-1.4
4,146,007	+		DZA65_RS19175	0.34	-0.9
4,146,007	+		DZA65_RS19175	0.34	-0.7
4,146,007	+		DZA65_RS19175	0.34	-0.8
4,146,007	+		DZA65_RS19175	0.34	-0.1
4,146,008	-		DZA65_RS19175	0.35	-1.5
4,146,008	-		DZA65_RS19175	0.35	-0.7
4,146,008	-		DZA65_RS19175	0.35	-0.7
4,146,008	-		DZA65_RS19175	0.35	-0.8
4,146,019	+		DZA65_RS19175	0.36	-1.6
4,146,019	+		DZA65_RS19175	0.36	-0.9
4,146,019	+		DZA65_RS19175	0.36	-0.8
4,146,019	+		DZA65_RS19175	0.36	-0.0
4,146,019	+		DZA65_RS19175	0.36	+0.5
4,146,019	+		DZA65_RS19175	0.36	-0.6
4,146,020	-		DZA65_RS19175	0.36	-1.1
4,146,020	-		DZA65_RS19175	0.36	-0.4
4,146,020	-		DZA65_RS19175	0.36	-1.2
4,146,020	-		DZA65_RS19175	0.36	-2.2
4,146,025	+		DZA65_RS19175	0.36	-1.1
4,146,025	+		DZA65_RS19175	0.36	+0.3
4,146,025	+		DZA65_RS19175	0.36	+0.0
4,146,025	+		DZA65_RS19175	0.36	-0.3
4,146,026	-		DZA65_RS19175	0.36	-0.4
4,146,026	-		DZA65_RS19175	0.36	-1.9
4,146,026	-		DZA65_RS19175	0.36	-1.3
4,146,026	-		DZA65_RS19175	0.36	-0.4
4,146,266	-		DZA65_RS19175	0.60	-0.4
4,146,303	-		DZA65_RS19175	0.64	-3.4
4,146,338	+		DZA65_RS19175	0.67	-0.4
4,146,338	+		DZA65_RS19175	0.67	-0.6
4,146,339	-		DZA65_RS19175	0.67	-0.6
4,146,339	-		DZA65_RS19175	0.67	-1.2
4,146,339	-		DZA65_RS19175	0.67	-2.4
4,146,339	-		DZA65_RS19175	0.67	-0.4
4,146,339	-		DZA65_RS19175	0.67	-1.5
4,146,421	+		DZA65_RS19175	0.76	-0.8
4,146,421	+		DZA65_RS19175	0.76	-0.6
4,146,439	+		DZA65_RS19175	0.77	-0.6
4,146,439	+		DZA65_RS19175	0.77	-1.1
4,146,439	+		DZA65_RS19175	0.77	+0.0
4,146,439	+		DZA65_RS19175	0.77	+0.4
4,146,440	-		DZA65_RS19175	0.78	-0.6
4,146,440	-		DZA65_RS19175	0.78	-2.0
4,146,440	-		DZA65_RS19175	0.78	-1.0
4,146,440	-		DZA65_RS19175	0.78	-1.1
4,146,440	-		DZA65_RS19175	0.78	-1.1
4,146,440	-		DZA65_RS19175	0.78	-2.7
4,146,526	+		DZA65_RS19175	0.86	+0.8
4,146,527	-		DZA65_RS19175	0.86	-1.1
4,146,527	-		DZA65_RS19175	0.86	-1.9
4,146,527	-		DZA65_RS19175	0.86	-1.4
4,146,527	-		DZA65_RS19175	0.86	-0.6
4,146,596	+				-0.3
4,146,602	+				-0.3
4,146,603	-				-2.8
4,146,611	-				-0.5
4,146,611	-				-1.8
4,146,624	-				-0.8
4,146,722	+				-0.9
4,146,745	+				+0.7
4,146,745	+				-0.8
4,146,746	-				+1.9
4,146,746	-				-0.7
4,146,746	-				-1.0
4,146,746	-				-0.8
4,146,778	+				-0.4
4,146,785	+				-0.8
4,146,785	+				-0.2
4,146,785	+				+1.0
4,146,785	+				+1.1
4,146,785	+				-0.6
4,146,785	+				+0.9
4,146,785	+				+0.7
4,146,785	+				+0.7
4,146,785	+				+0.1
4,146,785	+				-0.2
4,146,831	+				-0.5
4,146,831	+				-0.5
4,146,831	+				-0.4
4,146,832	-				-0.5
4,146,832	-				-1.5
4,146,832	-				+0.6
4,146,834	+				-0.7
4,146,834	+				+0.8
4,146,834	+				-0.7
4,146,835	-				+2.1
4,146,852	+				+1.4
4,146,852	+				+0.7
4,146,853	-				-0.3
4,146,853	-				-1.0
4,146,860	+				+0.2
4,146,860	+				-0.2
4,146,860	+				+0.4
4,146,861	-				+1.0
4,147,040	+		DZA65_RS19180	0.27	+0.0
4,147,040	+		DZA65_RS19180	0.27	+0.4
4,147,041	-		DZA65_RS19180	0.27	-0.3
4,147,042	+		DZA65_RS19180	0.27	+0.8
4,147,042	+		DZA65_RS19180	0.27	-1.2
4,147,042	+		DZA65_RS19180	0.27	-0.3
4,147,042	+		DZA65_RS19180	0.27	-0.8
4,147,042	+		DZA65_RS19180	0.27	+0.2
4,147,043	-		DZA65_RS19180	0.27	-0.8
4,147,043	-		DZA65_RS19180	0.27	+0.6
4,147,128	+		DZA65_RS19180	0.45	+0.3
4,147,129	-		DZA65_RS19180	0.45	-0.2
4,147,129	-		DZA65_RS19180	0.45	-0.4
4,147,129	-		DZA65_RS19180	0.45	-0.4
4,147,159	+		DZA65_RS19180	0.51	+0.1
4,147,159	+		DZA65_RS19180	0.51	+0.1
4,147,159	+		DZA65_RS19180	0.51	+1.4
4,147,159	+		DZA65_RS19180	0.51	-0.0
4,147,159	+		DZA65_RS19180	0.51	-0.9
4,147,160	-		DZA65_RS19180	0.51	-0.6
4,147,160	-		DZA65_RS19180	0.51	-0.6
4,147,160	-		DZA65_RS19180	0.51	+0.6
4,147,160	-		DZA65_RS19180	0.51	-0.2
4,147,160	-		DZA65_RS19180	0.51	-1.4
4,147,160	-		DZA65_RS19180	0.51	+0.4
4,147,160	-		DZA65_RS19180	0.51	-0.8
4,147,160	-		DZA65_RS19180	0.51	-0.1
4,147,160	-		DZA65_RS19180	0.51	-0.4
4,147,318	+		DZA65_RS19180	0.83	+0.4
4,147,319	-		DZA65_RS19180	0.83	-1.4
4,147,319	-		DZA65_RS19180	0.83	-0.1
4,147,391	+				-0.1
4,147,565	-				-0.1
4,147,590	+		DZA65_RS19185	0.11	-1.1
4,147,590	+		DZA65_RS19185	0.11	+0.6
4,147,591	-		DZA65_RS19185	0.11	+0.8
4,147,591	-		DZA65_RS19185	0.11	-2.6
4,147,591	-		DZA65_RS19185	0.11	-0.4
4,147,591	-		DZA65_RS19185	0.11	+0.0
4,147,591	-		DZA65_RS19185	0.11	-0.6
4,147,591	-		DZA65_RS19185	0.11	-2.7
4,147,632	+		DZA65_RS19185	0.13	-1.4
4,147,632	+		DZA65_RS19185	0.13	+1.0
4,147,632	+		DZA65_RS19185	0.13	-0.1
4,147,632	+		DZA65_RS19185	0.13	+0.7
4,147,632	+		DZA65_RS19185	0.13	+0.7
4,147,632	+		DZA65_RS19185	0.13	+0.2
4,147,633	-		DZA65_RS19185	0.13	-0.4
4,147,633	-		DZA65_RS19185	0.13	-0.2
4,147,633	-		DZA65_RS19185	0.13	+0.8
4,147,633	-		DZA65_RS19185	0.13	+0.2
4,147,633	-		DZA65_RS19185	0.13	-0.6
4,147,633	-		DZA65_RS19185	0.13	-0.7
4,147,633	-		DZA65_RS19185	0.13	+0.4
4,147,633	-		DZA65_RS19185	0.13	-1.2
4,147,656	+		DZA65_RS19185	0.15	-1.6
4,147,656	+		DZA65_RS19185	0.15	-1.0
4,147,656	+		DZA65_RS19185	0.15	+0.7
4,147,656	+		DZA65_RS19185	0.15	-1.8
4,147,656	+		DZA65_RS19185	0.15	-0.6
4,147,656	+		DZA65_RS19185	0.15	+0.8
4,147,656	+		DZA65_RS19185	0.15	-0.4
4,147,657	-		DZA65_RS19185	0.15	+1.0
4,147,657	-		DZA65_RS19185	0.15	+0.1
4,147,657	-		DZA65_RS19185	0.15	-0.5
4,147,731	+		DZA65_RS19185	0.19	-0.4
4,147,731	+		DZA65_RS19185	0.19	-0.6
4,147,732	-		DZA65_RS19185	0.19	-0.2
4,147,759	+		DZA65_RS19185	0.21	-0.1
4,147,759	+		DZA65_RS19185	0.21	-0.6
4,147,759	+		DZA65_RS19185	0.21	+0.7
4,147,772	-		DZA65_RS19185	0.21	-0.1
4,147,855	+		DZA65_RS19185	0.26	+1.2
4,147,905	+		DZA65_RS19185	0.29	-0.2
4,147,905	+		DZA65_RS19185	0.29	-0.2
4,147,906	-		DZA65_RS19185	0.29	+0.8
4,147,906	-		DZA65_RS19185	0.29	-0.8
4,147,908	+		DZA65_RS19185	0.29	+0.0
4,147,908	+		DZA65_RS19185	0.29	+1.7
4,147,909	-		DZA65_RS19185	0.29	-0.6
4,147,909	-		DZA65_RS19185	0.29	-0.6
4,147,909	-		DZA65_RS19185	0.29	-0.6
4,147,909	-		DZA65_RS19185	0.29	-0.0
4,147,909	-		DZA65_RS19185	0.29	+0.4
4,147,909	-		DZA65_RS19185	0.29	-0.4
4,147,953	+		DZA65_RS19185	0.32	-0.1
4,147,953	+		DZA65_RS19185	0.32	-2.8
4,147,953	+		DZA65_RS19185	0.32	-0.1
4,147,953	+		DZA65_RS19185	0.32	-0.0
4,147,953	+		DZA65_RS19185	0.32	-0.2
4,147,953	+		DZA65_RS19185	0.32	-0.6
4,147,953	+		DZA65_RS19185	0.32	+0.3
4,147,953	+		DZA65_RS19185	0.32	-0.3
4,147,954	-		DZA65_RS19185	0.32	+1.0
4,147,954	-		DZA65_RS19185	0.32	+0.5
4,147,954	-		DZA65_RS19185	0.32	-0.0
4,148,028	+		DZA65_RS19185	0.36	+2.6
4,148,028	+		DZA65_RS19185	0.36	-0.2
4,148,028	+		DZA65_RS19185	0.36	-1.1
4,148,029	-		DZA65_RS19185	0.36	+0.3
4,148,029	-		DZA65_RS19185	0.36	-0.4
4,148,029	-		DZA65_RS19185	0.36	-1.5
4,148,029	-		DZA65_RS19185	0.36	+1.4
4,148,029	-		DZA65_RS19185	0.36	-0.9
4,148,029	-		DZA65_RS19185	0.36	+0.6
4,148,029	-		DZA65_RS19185	0.36	-1.1
4,148,241	+		DZA65_RS19185	0.49	-0.1
4,148,241	+		DZA65_RS19185	0.49	+1.1
4,148,241	+		DZA65_RS19185	0.49	+0.7
4,148,241	+		DZA65_RS19185	0.49	-0.2
4,148,241	+				+0.4
4,148,241	+		DZA65_RS19185	0.49	-0.4
4,148,241	+		DZA65_RS19185	0.49	+0.7
4,148,242	-		DZA65_RS19185	0.49	-0.7
4,148,242	-		DZA65_RS19185	0.49	+0.4
4,148,242	-		DZA65_RS19185	0.49	-0.4
4,148,242	-		DZA65_RS19185	0.49	-0.3
4,148,242	-		DZA65_RS19185	0.49	+0.7
4,148,321	-		DZA65_RS19185	0.53	-0.9
4,148,331	+		DZA65_RS19185	0.54	-2.5
4,148,331	+		DZA65_RS19185	0.54	-0.8
4,148,331	+		DZA65_RS19185	0.54	+0.4
4,148,331	+		DZA65_RS19185	0.54	+0.8
4,148,331	+		DZA65_RS19185	0.54	-0.2
4,148,331	+		DZA65_RS19185	0.54	-0.2
4,148,331	+		DZA65_RS19185	0.54	-0.4
4,148,331	+		DZA65_RS19185	0.54	-0.8
4,148,331	+		DZA65_RS19185	0.54	-0.3
4,148,332	-		DZA65_RS19185	0.54	-0.2
4,148,332	-		DZA65_RS19185	0.54	-0.2
4,148,332	-		DZA65_RS19185	0.54	-1.1
4,148,332	-		DZA65_RS19185	0.54	-1.2
4,148,332	-		DZA65_RS19185	0.54	-0.3
4,148,332	-		DZA65_RS19185	0.54	+0.1
4,148,332	-		DZA65_RS19185	0.54	-1.8
4,148,332	-		DZA65_RS19185	0.54	-0.3
4,148,332	-		DZA65_RS19185	0.54	-0.2
4,148,332	-		DZA65_RS19185	0.54	-0.2
4,148,354	-		DZA65_RS19185	0.55	-0.4