Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18270

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,938,967	+		DZA65_RS18260	0.66	+1.3
3,938,967	+		DZA65_RS18260	0.66	-0.4
3,938,967	+		DZA65_RS18260	0.66	+0.2
3,938,967	+		DZA65_RS18260	0.66	+1.3
3,938,968	-		DZA65_RS18260	0.66	+0.5
3,938,968	-		DZA65_RS18260	0.66	-0.5
3,938,968	-		DZA65_RS18260	0.66	+0.7
3,938,968	-		DZA65_RS18260	0.66	-1.1
3,939,153	+		DZA65_RS18260	0.88	+0.5
3,939,154	-		DZA65_RS18260	0.88	-2.8
3,939,159	+		DZA65_RS18260	0.89	-1.5
3,939,159	+		DZA65_RS18260	0.89	+0.5
3,939,159	+		DZA65_RS18260	0.89	+0.3
3,939,159	+		DZA65_RS18260	0.89	+0.8
3,939,159	+		DZA65_RS18260	0.89	+0.1
3,939,159	+		DZA65_RS18260	0.89	+0.5
3,939,159	+		DZA65_RS18260	0.89	+0.0
3,939,159	+		DZA65_RS18260	0.89	+1.1
3,939,159	+		DZA65_RS18260	0.89	+0.0
3,939,159	+		DZA65_RS18260	0.89	+0.3
3,939,159	+		DZA65_RS18260	0.89	-0.5
3,939,160	-		DZA65_RS18260	0.89	+0.5
3,939,160	-		DZA65_RS18260	0.89	+0.4
3,939,160	-		DZA65_RS18260	0.89	+0.8
3,939,160	-		DZA65_RS18260	0.89	-0.3
3,939,160	-		DZA65_RS18260	0.89	-0.2
3,939,160	-		DZA65_RS18260	0.89	-0.7
3,939,258	-				+0.6
3,939,266	-				-0.2
3,939,266	-				-1.5
3,939,311	+				+0.0
3,939,311	+				+0.9
3,939,311	+				-0.2
3,939,311	+				-0.8
3,939,312	-				+0.8
3,939,312	-				-0.0
3,939,313	+				-0.3
3,939,313	+				+1.0
3,939,313	+				+0.1
3,939,314	-				-0.5
3,939,314	-				-1.2
3,939,314	-				-1.7
3,939,314	-				-0.7
3,939,314	-				-0.9
3,939,355	+				-0.2
3,939,355	+				-0.5
3,939,360	+				+0.1
3,939,361	-				-0.4
3,939,361	-				-0.7
3,939,366	+				-0.2
3,939,366	+				-0.9
3,939,366	+				+0.0
3,939,366	+				+0.2
3,939,366	+				-0.8
3,939,366	+				+0.3
3,939,366	+				-0.3
3,939,366	+				-0.2
3,939,366	+				+1.9
3,939,366	+				+0.1
3,939,366	+				-1.1
3,939,366	+				-0.0
3,939,367	-				-0.4
3,939,367	-				+0.7
3,939,367	-				+0.4
3,939,367	-				+0.2
3,939,367	-				-0.3
3,939,367	-				+0.4
3,939,369	+				+1.0
3,939,369	+				-0.2
3,939,369	+				+0.0
3,939,369	+				-0.8
3,939,370	-				+0.8
3,939,370	-				-0.1
3,939,370	-				+0.3
3,939,370	-				-0.0
3,939,370	-				-0.1
3,939,370	-				+0.0
3,939,370	-				-0.0
3,939,380	+				-0.9
3,939,380	+				+0.0
3,939,381	-				-1.4
3,939,385	+				+0.1
3,939,845	+				+0.3
3,939,845	+				-1.3
3,939,845	+				+0.2
3,939,845	+				-1.5
3,939,848	+				-0.6
3,939,867	+				+0.2
3,939,867	+				-0.1
3,939,868	-				-0.5
3,939,897	+				-0.8
3,940,118	-		DZA65_RS18270	0.34	-0.8
3,940,142	-		DZA65_RS18270	0.38	-1.5
3,940,179	+		DZA65_RS18270	0.44	+0.6
3,940,179	+		DZA65_RS18270	0.44	-0.7
3,940,179	+		DZA65_RS18270	0.44	+0.3
3,940,179	+		DZA65_RS18270	0.44	-0.2
3,940,184	-		DZA65_RS18270	0.45	+0.8
3,940,213	-		DZA65_RS18270	0.49	-0.2
3,940,249	-		DZA65_RS18270	0.55	-0.1
3,940,312	+				+1.3
3,940,357	+		DZA65_RS18270	0.71	+2.1
3,940,357	+		DZA65_RS18270	0.71	-0.7
3,940,434	+		DZA65_RS18270	0.83	-0.7
3,940,435	-		DZA65_RS18270	0.84	-0.7
3,940,437	+				+0.8
3,940,438	-		DZA65_RS18270	0.84	-1.7
3,940,438	-		DZA65_RS18270	0.84	-1.8
3,940,438	-		DZA65_RS18270	0.84	-1.0
3,940,732	+				+0.1
3,940,733	-				-0.2
3,940,786	+		DZA65_RS18275	0.11	-0.9
3,940,786	+		DZA65_RS18275	0.11	+0.3
3,940,786	+		DZA65_RS18275	0.11	+0.0
3,940,787	-		DZA65_RS18275	0.11	+0.3
3,940,787	-		DZA65_RS18275	0.11	-1.7
3,940,787	-		DZA65_RS18275	0.11	-0.8
3,940,787	-		DZA65_RS18275	0.11	-1.7
3,940,992	+		DZA65_RS18275	0.24	-0.3
3,940,993	-		DZA65_RS18275	0.24	+0.3
3,941,076	+		DZA65_RS18275	0.29	+0.1
3,941,076	+		DZA65_RS18275	0.29	+0.8
3,941,115	+		DZA65_RS18275	0.31	-0.2
3,941,157	+		DZA65_RS18275	0.34	+0.7
3,941,225	+		DZA65_RS18275	0.38	-0.8
3,941,225	+		DZA65_RS18275	0.38	+0.4
3,941,225	+		DZA65_RS18275	0.38	-0.1
3,941,225	+		DZA65_RS18275	0.38	-0.7
3,941,226	-		DZA65_RS18275	0.38	-1.1
3,941,226	-		DZA65_RS18275	0.38	+0.2
3,941,226	-		DZA65_RS18275	0.38	-1.0
3,941,226	-		DZA65_RS18275	0.38	-0.5
3,941,226	-		DZA65_RS18275	0.38	-0.8
3,941,323	-		DZA65_RS18275	0.44	-0.4
3,941,484	+		DZA65_RS18275	0.55	+0.3
3,941,485	-		DZA65_RS18275	0.55	-0.1
3,941,527	+		DZA65_RS18275	0.57	-0.5