Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS16260

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,525,917	+		DZA65_RS16250	0.66	+1.4
3,525,918	-		DZA65_RS16250	0.66	-0.3
3,525,930	+		DZA65_RS16250	0.68	-0.6
3,525,930	+		DZA65_RS16250	0.68	-0.6
3,525,930	+		DZA65_RS16250	0.68	+0.0
3,525,930	+		DZA65_RS16250	0.68	-0.7
3,525,931	-		DZA65_RS16250	0.68	+1.5
3,525,988	-		DZA65_RS16250	0.76	-1.0
3,525,988	-		DZA65_RS16250	0.76	-1.8
3,525,990	+		DZA65_RS16250	0.76	+0.5
3,526,008	-		DZA65_RS16250	0.79	+0.7
3,526,008	-		DZA65_RS16250	0.79	-0.3
3,526,010	+		DZA65_RS16250	0.79	-0.1
3,526,010	+		DZA65_RS16250	0.79	-0.2
3,526,010	+		DZA65_RS16250	0.79	+0.2
3,526,011	-		DZA65_RS16250	0.79	-0.3
3,526,011	-		DZA65_RS16250	0.79	-1.1
3,526,011	-		DZA65_RS16250	0.79	-1.6
3,526,029	-		DZA65_RS16250	0.82	+0.1
3,526,029	-		DZA65_RS16250	0.82	-2.2
3,526,038	+		DZA65_RS16250	0.83	+0.9
3,526,163	-				-1.3
3,526,187	+				-1.0
3,526,197	+				-0.1
3,526,198	-				+0.3
3,526,201	-				+0.5
3,526,243	+		DZA65_RS16255	0.12	-0.3
3,526,243	+		DZA65_RS16255	0.12	-0.6
3,526,244	-		DZA65_RS16255	0.12	-1.6
3,526,336	-		DZA65_RS16255	0.26	+1.0
3,526,347	-		DZA65_RS16255	0.28	-0.0
3,526,347	-		DZA65_RS16255	0.28	-0.5
3,526,348	+		DZA65_RS16255	0.28	+0.4
3,526,348	+		DZA65_RS16255	0.28	+0.2
3,526,375	-		DZA65_RS16255	0.32	+0.2
3,526,397	+		DZA65_RS16255	0.35	+0.6
3,526,397	+		DZA65_RS16255	0.35	+0.5
3,526,407	+		DZA65_RS16255	0.36	+0.6
3,526,478	+		DZA65_RS16255	0.47	+1.8
3,526,479	-		DZA65_RS16255	0.47	+0.2
3,526,479	-		DZA65_RS16255	0.47	-2.5
3,526,479	-		DZA65_RS16255	0.47	-0.3
3,526,490	+		DZA65_RS16255	0.49	-0.0
3,526,491	-		DZA65_RS16255	0.49	-0.7
3,526,491	-		DZA65_RS16255	0.49	-0.6
3,526,492	+		DZA65_RS16255	0.49	+0.1
3,526,492	+		DZA65_RS16255	0.49	+0.0
3,526,506	-		DZA65_RS16255	0.51	-0.2
3,526,506	-		DZA65_RS16255	0.51	+0.5
3,526,578	+		DZA65_RS16255	0.62	-0.9
3,526,578	+		DZA65_RS16255	0.62	+0.2
3,526,579	-		DZA65_RS16255	0.62	-0.1
3,526,582	+		DZA65_RS16255	0.63	-1.0
3,526,582	+		DZA65_RS16255	0.63	-0.6
3,526,583	-		DZA65_RS16255	0.63	-0.9
3,526,583	-		DZA65_RS16255	0.63	+0.9
3,526,583	-		DZA65_RS16255	0.63	-0.1
3,526,585	-		DZA65_RS16255	0.63	+1.7
3,526,585	-		DZA65_RS16255	0.63	-2.0
3,526,587	+		DZA65_RS16255	0.63	+0.2
3,526,604	-		DZA65_RS16255	0.66	-0.1
3,526,604	-		DZA65_RS16255	0.66	-1.6
3,526,604	-		DZA65_RS16255	0.66	-1.6
3,526,611	+		DZA65_RS16255	0.67	-1.5
3,526,642	+		DZA65_RS16255	0.72	-0.8
3,526,642	+		DZA65_RS16255	0.72	+0.6
3,526,643	-		DZA65_RS16255	0.72	+1.0
3,526,676	+		DZA65_RS16255	0.77	-0.2
3,526,677	-		DZA65_RS16255	0.77	-0.8
3,526,739	+		DZA65_RS16255	0.86	-0.7
3,526,758	+		DZA65_RS16255	0.89	-0.1
3,526,759	-		DZA65_RS16255	0.89	+0.4
3,526,759	-		DZA65_RS16255	0.89	+0.2
3,526,759	-		DZA65_RS16255	0.89	-1.0
3,526,760	+		DZA65_RS16255	0.89	+0.3
3,526,761	-		DZA65_RS16255	0.89	-0.1
3,526,774	+				+0.2
3,526,780	+				-1.6
3,526,781	-				-0.3
3,526,782	+				+0.3
3,526,783	-				-0.3
3,526,783	-				-1.3
3,526,786	+				+0.8
3,526,786	+				-2.2
3,526,787	-				-0.3
3,526,787	-				+0.2
3,526,787	-				+0.2
3,526,787	-				+1.4
3,526,787	-				+0.2
3,526,787	-				+0.2
3,526,897	-				-0.1
3,526,897	-				+0.0
3,526,897	-				-0.3
3,526,917	+				+0.4
3,526,936	-		DZA65_RS16260	0.14	-0.9
3,526,936	-		DZA65_RS16260	0.14	-0.6
3,526,968	+		DZA65_RS16260	0.21	-0.5
3,526,968	+		DZA65_RS16260	0.21	-0.6
3,527,105	+		DZA65_RS16260	0.54	-0.1
3,527,212	-		DZA65_RS16260	0.80	-0.1
3,527,212	-		DZA65_RS16260	0.80	-0.2
3,527,212	-		DZA65_RS16260	0.80	-1.4
3,527,216	+		DZA65_RS16260	0.81	+0.2
3,527,216	+		DZA65_RS16260	0.81	-0.8
3,527,239	-		DZA65_RS16260	0.87	-1.1
3,527,251	+		DZA65_RS16260	0.90	-0.3
3,527,275	+				-1.2
3,527,276	-				+0.2
3,527,375	+				-1.2
3,527,375	+				-1.2
3,527,376	-				-0.5
3,527,376	-				-0.3
3,527,419	-				-1.2
3,527,425	+				-3.1
3,527,437	-				-0.3
3,527,480	+				-0.3
3,527,480	+				+0.7
3,527,480	+				-0.1
3,527,480	+				+0.2
3,527,480	+				-1.1
3,527,480	+				+0.5
3,527,481	-				+0.2
3,527,481	-				+0.2
3,527,481	-				+0.6
3,527,604	-				-0.5
3,527,604	-				-0.2
3,527,619	+				-0.6
3,527,622	+				+0.7
3,527,685	+				+0.8
3,527,686	-				-0.5
3,527,755	+				-0.8
3,527,777	-				-0.3
3,527,800	+				-0.6
3,527,804	-				-0.1
3,527,804	-				-0.6
3,527,827	-				-0.6
3,527,883	-				+0.4
3,527,994	+		DZA65_RS16265	0.30	+0.1
3,527,995	-		DZA65_RS16265	0.30	-2.6
3,528,142	-		DZA65_RS16265	0.60	+0.7
3,528,220	+		DZA65_RS16265	0.76	+0.6