Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15635

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,396,420	+		DZA65_RS15630	0.10	+0.2
3,396,421	-		DZA65_RS15630	0.11	-0.3
3,396,421	-		DZA65_RS15630	0.11	-0.4
3,396,427	-		DZA65_RS15630	0.11	+0.1
3,396,535	+		DZA65_RS15630	0.24	-1.5
3,396,593	+		DZA65_RS15630	0.31	+0.0
3,396,661	-		DZA65_RS15630	0.39	-1.0
3,396,673	-		DZA65_RS15630	0.40	-0.2
3,396,673	-		DZA65_RS15630	0.40	-0.5
3,396,692	-		DZA65_RS15630	0.42	+0.4
3,396,995	+		DZA65_RS15630	0.78	+0.8
3,397,105	-				+0.4
3,397,126	+				-0.5
3,397,127	-				-1.0
3,397,147	-				+0.2
3,397,228	+				-0.7
3,397,299	+				-0.5
3,397,364	+				-2.0
3,397,394	-				+1.0
3,397,548	+		DZA65_RS15635	0.38	-0.8
3,397,549	-		DZA65_RS15635	0.38	+0.2
3,397,549	-		DZA65_RS15635	0.38	-0.8
3,397,621	+		DZA65_RS15635	0.53	-2.0
3,397,754	+				+1.2
3,397,754	+		DZA65_RS15635	0.80	+0.4
3,397,754	+		DZA65_RS15635	0.80	+0.3
3,397,754	+		DZA65_RS15635	0.80	+0.4
3,397,754	+		DZA65_RS15635	0.80	+1.5
3,397,754	+		DZA65_RS15635	0.80	-0.4
3,397,754	+		DZA65_RS15635	0.80	-2.3
3,397,754	+		DZA65_RS15635	0.80	-1.1
3,397,755	-		DZA65_RS15635	0.80	-1.1
3,397,755	-		DZA65_RS15635	0.80	-0.4
3,397,755	-		DZA65_RS15635	0.80	-0.0
3,397,757	+		DZA65_RS15635	0.81	+0.1
3,397,757	+		DZA65_RS15635	0.81	+0.9
3,397,757	+		DZA65_RS15635	0.81	-0.1
3,397,757	+		DZA65_RS15635	0.81	+0.9
3,397,757	+		DZA65_RS15635	0.81	-1.4
3,397,757	+		DZA65_RS15635	0.81	-1.7
3,397,757	+		DZA65_RS15635	0.81	+0.2
3,397,757	+		DZA65_RS15635	0.81	-1.4
3,397,757	+		DZA65_RS15635	0.81	-0.7
3,397,757	+		DZA65_RS15635	0.81	+0.2
3,397,757	+		DZA65_RS15635	0.81	+0.3
3,397,757	+		DZA65_RS15635	0.81	-0.4
3,397,758	-		DZA65_RS15635	0.81	-0.9
3,397,758	-		DZA65_RS15635	0.81	-0.7
3,397,758	-		DZA65_RS15635	0.81	-1.7
3,397,758	-		DZA65_RS15635	0.81	-0.8
3,397,758	-		DZA65_RS15635	0.81	-0.6
3,397,758	-		DZA65_RS15635	0.81	-0.6
3,397,758	-		DZA65_RS15635	0.81	-0.1
3,397,758	-		DZA65_RS15635	0.81	+0.2
3,397,758	-		DZA65_RS15635	0.81	+0.3
3,397,758	-		DZA65_RS15635	0.81	-1.3
3,397,758	-		DZA65_RS15635	0.81	-0.7
3,397,758	-		DZA65_RS15635	0.81	-1.5
3,397,758	-		DZA65_RS15635	0.81	+1.0
3,397,870	-				-0.1
3,397,927	+				+1.2
3,397,927	+				-0.6
3,397,927	+				-0.1
3,397,928	-				-0.5
3,397,928	-				+0.2
3,397,928	-				-0.6
3,397,928	-				+0.0
3,397,966	+				-0.0
3,397,966	+				-1.2
3,397,966	+				+0.1
3,397,966	+				+1.2
3,397,967	-				+0.4
3,397,967	-				+0.2
3,397,967	-				+0.2
3,397,967	-				-0.6
3,397,967	-				+0.9
3,398,212	+		DZA65_RS15640	0.30	+0.3
3,398,227	+		DZA65_RS15640	0.32	-1.0
3,398,227	+		DZA65_RS15640	0.32	+0.6
3,398,227	+		DZA65_RS15640	0.32	+1.2
3,398,228	-		DZA65_RS15640	0.32	-0.4
3,398,228	-		DZA65_RS15640	0.32	-0.2
3,398,236	+		DZA65_RS15640	0.32	+1.2
3,398,289	+		DZA65_RS15640	0.37	-1.1
3,398,289	+		DZA65_RS15640	0.37	-0.9
3,398,300	+		DZA65_RS15640	0.38	+0.4
3,398,300	+		DZA65_RS15640	0.38	-0.1
3,398,300	+		DZA65_RS15640	0.38	-0.4
3,398,301	-		DZA65_RS15640	0.38	+1.9
3,398,301	-		DZA65_RS15640	0.38	-0.6
3,398,366	+		DZA65_RS15640	0.43	+0.2
3,398,366	+		DZA65_RS15640	0.43	+0.4
3,398,366	+		DZA65_RS15640	0.43	-0.4
3,398,366	+		DZA65_RS15640	0.43	+1.0
3,398,366	+		DZA65_RS15640	0.43	+0.9
3,398,366	+		DZA65_RS15640	0.43	+0.7
3,398,366	+		DZA65_RS15640	0.43	+1.6
3,398,366	+		DZA65_RS15640	0.43	-0.7
3,398,367	-		DZA65_RS15640	0.43	-0.2
3,398,367	-		DZA65_RS15640	0.43	-0.4
3,398,367	-		DZA65_RS15640	0.43	+0.2
3,398,367	-		DZA65_RS15640	0.43	-0.0
3,398,367	-		DZA65_RS15640	0.43	+1.4
3,398,367	-		DZA65_RS15640	0.43	+0.6
3,398,367	-		DZA65_RS15640	0.43	+0.4
3,398,367	-		DZA65_RS15640	0.43	+0.8
3,398,367	-		DZA65_RS15640	0.43	-0.3
3,398,367	-		DZA65_RS15640	0.43	+0.4
3,398,367	-		DZA65_RS15640	0.43	-0.3
3,398,367	-		DZA65_RS15640	0.43	+0.2
3,398,367	-		DZA65_RS15640	0.43	-0.4
3,398,370	+		DZA65_RS15640	0.43	-0.8
3,398,370	+		DZA65_RS15640	0.43	-0.3
3,398,370	+		DZA65_RS15640	0.43	+0.5
3,398,466	+		DZA65_RS15640	0.51	-1.5
3,398,466	+		DZA65_RS15640	0.51	-2.3
3,398,466	+		DZA65_RS15640	0.51	+1.5
3,398,466	+		DZA65_RS15640	0.51	+0.2
3,398,467	-		DZA65_RS15640	0.51	-0.9
3,398,467	-		DZA65_RS15640	0.51	-1.3
3,398,467	-		DZA65_RS15640	0.51	+0.7
3,398,467	-		DZA65_RS15640	0.51	+0.1
3,398,540	+		DZA65_RS15640	0.58	-0.6
3,398,540	+		DZA65_RS15640	0.58	-1.3
3,398,545	-		DZA65_RS15640	0.58	+0.0
3,398,665	-		DZA65_RS15640	0.68	+1.2
3,398,790	-		DZA65_RS15640	0.78	+0.3
3,398,835	-		DZA65_RS15640	0.82	+0.0