Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13600

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,920,138	+				-2.3
2,920,138	+				+0.9
2,920,138	+				-0.1
2,920,138	+				-1.7
2,920,138	+				+1.0
2,920,142	+				-0.8
2,920,217	-				-0.4
2,920,308	+		DZA65_RS13595	0.18	+0.4
2,920,309	-		DZA65_RS13595	0.19	-0.8
2,920,310	+		DZA65_RS13595	0.19	-2.1
2,920,311	-		DZA65_RS13595	0.19	-1.4
2,920,317	+		DZA65_RS13595	0.20	+0.7
2,920,435	+		DZA65_RS13595	0.40	-0.5
2,920,435	+		DZA65_RS13595	0.40	+0.4
2,920,435	+		DZA65_RS13595	0.40	-1.5
2,920,435	+		DZA65_RS13595	0.40	-1.3
2,920,465	-		DZA65_RS13595	0.45	-0.5
2,920,505	-		DZA65_RS13595	0.52	+0.7
2,920,505	-		DZA65_RS13595	0.52	-2.0
2,920,510	+		DZA65_RS13595	0.52	-0.5
2,920,516	+		DZA65_RS13595	0.53	+0.6
2,920,782	+				+0.0
2,920,827	+				-0.5
2,920,827	+				-0.3
2,920,828	-				-1.0
2,920,950	+		DZA65_RS13600	0.35	-1.8
2,920,950	+		DZA65_RS13600	0.35	-1.5
2,920,951	-		DZA65_RS13600	0.36	-0.5
2,920,956	+		DZA65_RS13600	0.37	+0.0
2,920,957	-		DZA65_RS13600	0.37	-1.5
2,920,993	+		DZA65_RS13600	0.47	-0.8
2,920,993	+		DZA65_RS13600	0.47	+0.8
2,920,993	+		DZA65_RS13600	0.47	-0.6
2,920,993	+		DZA65_RS13600	0.47	-0.3
2,920,994	-		DZA65_RS13600	0.47	-1.8
2,920,994	-		DZA65_RS13600	0.47	+2.3
2,920,994	-		DZA65_RS13600	0.47	-0.3
2,920,994	-		DZA65_RS13600	0.47	+1.0
2,920,994	-		DZA65_RS13600	0.47	-0.5
2,920,994	-		DZA65_RS13600	0.47	-0.8
2,920,994	-		DZA65_RS13600	0.47	+0.2
2,921,111	-		DZA65_RS13600	0.77	+0.0
2,921,111	-		DZA65_RS13600	0.77	-0.2
2,921,153	-		DZA65_RS13600	0.88	-2.5
2,921,153	-		DZA65_RS13600	0.88	-0.8
2,921,153	-		DZA65_RS13600	0.88	-0.5
2,921,153	-		DZA65_RS13600	0.88	+0.0
2,921,252	+		DZA65_RS13605	0.13	+1.3
2,921,252	+				-1.0
2,921,252	+		DZA65_RS13605	0.13	+0.1
2,921,253	-		DZA65_RS13605	0.14	+0.0
2,921,263	+		DZA65_RS13605	0.17	-0.5
2,921,263	+		DZA65_RS13605	0.17	-2.4
2,921,263	+		DZA65_RS13605	0.17	+0.8
2,921,263	+		DZA65_RS13605	0.17	-0.4
2,921,263	+		DZA65_RS13605	0.17	+1.3
2,921,263	+		DZA65_RS13605	0.17	+0.5
2,921,264	-		DZA65_RS13605	0.17	-1.1
2,921,264	-		DZA65_RS13605	0.17	-0.8
2,921,264	-		DZA65_RS13605	0.17	-0.3
2,921,264	-		DZA65_RS13605	0.17	+2.0
2,921,264	-		DZA65_RS13605	0.17	-0.3
2,921,264	-		DZA65_RS13605	0.17	+0.5
2,921,438	+		DZA65_RS13605	0.66	+0.1
2,921,439	-		DZA65_RS13605	0.67	-0.3
2,921,439	-		DZA65_RS13605	0.67	-1.1
2,921,450	+		DZA65_RS13605	0.70	-2.3
2,921,450	+				+1.0
2,921,451	-		DZA65_RS13605	0.70	+0.1
2,921,494	+		DZA65_RS13605	0.82	+0.0
2,921,494	+		DZA65_RS13605	0.82	-0.3
2,921,495	-		DZA65_RS13605	0.83	-0.9
2,921,556	-				-0.2
2,921,613	+				-2.0
2,921,623	-				+0.0
2,921,653	-				+0.2
2,921,653	-				-0.3
2,921,670	+				-0.3
2,921,671	-				+0.1
2,921,719	+				-0.8
2,921,847	+		DZA65_RS13610	0.17	+0.6
2,921,847	+		DZA65_RS13610	0.17	+0.8
2,921,847	+		DZA65_RS13610	0.17	+0.6
2,921,847	+		DZA65_RS13610	0.17	-0.0
2,921,847	+		DZA65_RS13610	0.17	-1.0
2,921,847	+		DZA65_RS13610	0.17	-0.3
2,921,848	-		DZA65_RS13610	0.17	+1.0
2,921,865	+		DZA65_RS13610	0.18	-0.8
2,921,865	+		DZA65_RS13610	0.18	+0.0
2,921,865	+		DZA65_RS13610	0.18	+0.2
2,921,865	+		DZA65_RS13610	0.18	-1.0
2,921,866	-		DZA65_RS13610	0.19	+0.4
2,921,866	-		DZA65_RS13610	0.19	-1.2
2,921,866	-				+0.7
2,921,866	-		DZA65_RS13610	0.19	+0.2
2,921,866	-		DZA65_RS13610	0.19	-1.1
2,921,957	-		DZA65_RS13610	0.27	-0.5
2,921,989	+		DZA65_RS13610	0.30	+0.0
2,921,990	-		DZA65_RS13610	0.30	-0.2
2,922,169	+		DZA65_RS13610	0.47	-1.3