Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13155

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,820,167	+				-1.0
2,820,167	+				-0.3
2,820,167	+				+0.7
2,820,184	+				+0.6
2,820,184	+				+0.3
2,820,184	+				-0.2
2,820,209	+				-0.7
2,820,209	+				+0.4
2,820,209	+				-1.4
2,820,210	-				+0.0
2,820,211	+				+0.0
2,820,212	-				+0.8
2,820,221	-				-1.6
2,820,262	+				-0.1
2,820,271	+				-0.6
2,820,272	-				-0.8
2,820,273	+				+0.0
2,820,273	+				-0.3
2,820,273	+				-2.1
2,820,273	+				+0.6
2,820,273	+				-1.2
2,820,274	-				-0.2
2,820,274	-				-0.4
2,820,274	-				-1.0
2,820,277	+				+0.2
2,820,277	+				+1.0
2,820,277	+				+0.1
2,820,277	+				+0.5
2,820,277	+				-0.2
2,820,277	+				-0.2
2,820,277	+				-0.4
2,820,277	+				+0.4
2,820,277	+				+0.2
2,820,278	-				-0.2
2,820,329	+				-0.4
2,820,329	+				+0.2
2,820,329	+				-2.0
2,820,353	+				-0.1
2,820,353	+				+1.5
2,820,353	+				+0.4
2,820,353	+				-0.3
2,820,354	-				-1.7
2,820,354	-				-1.8
2,820,358	-				+0.6
2,820,358	-				-2.1
2,820,411	+				+0.0
2,820,412	-				+0.0
2,820,412	-				-0.6
2,820,458	+				+0.9
2,820,458	+				-0.3
2,820,458	+				+0.4
2,820,458	+				-0.8
2,820,459	-				+0.6
2,820,459	-				+0.3
2,820,459	-				-1.1
2,820,459	-				-0.2
2,820,461	-				-1.0
2,820,461	-				+0.7
2,820,499	+		DZA65_RS13155	0.11	-0.3
2,820,499	+		DZA65_RS13155	0.11	+0.3
2,820,500	-		DZA65_RS13155	0.11	-1.0
2,820,500	-		DZA65_RS13155	0.11	+0.4
2,820,663	-		DZA65_RS13155	0.23	+1.0
2,820,663	-		DZA65_RS13155	0.23	-0.2
2,820,663	-		DZA65_RS13155	0.23	+0.6
2,820,674	+		DZA65_RS13155	0.24	-2.4
2,820,674	+		DZA65_RS13155	0.24	+0.5
2,820,674	+		DZA65_RS13155	0.24	-1.2
2,820,674	+		DZA65_RS13155	0.24	+0.6
2,820,674	+		DZA65_RS13155	0.24	-2.0
2,820,675	-		DZA65_RS13155	0.24	-0.6
2,820,675	-		DZA65_RS13155	0.24	-0.1
2,820,675	-		DZA65_RS13155	0.24	+0.5
2,820,675	-		DZA65_RS13155	0.24	+0.0
2,820,675	-		DZA65_RS13155	0.24	+0.0
2,820,731	+		DZA65_RS13155	0.28	-0.8
2,820,732	-		DZA65_RS13155	0.28	-0.3
2,820,732	-		DZA65_RS13155	0.28	+0.9
2,820,765	-		DZA65_RS13155	0.31	-1.8
2,820,773	+		DZA65_RS13155	0.31	-0.5
2,820,773	+		DZA65_RS13155	0.31	-0.8
2,820,869	+		DZA65_RS13155	0.38	-0.8
2,820,870	-		DZA65_RS13155	0.38	-0.6
2,820,870	-		DZA65_RS13155	0.38	-0.2
2,820,870	-		DZA65_RS13155	0.38	+0.4
2,820,870	-				+1.0
2,820,870	-		DZA65_RS13155	0.38	+0.6
2,820,887	-		DZA65_RS13155	0.40	-0.4
2,820,942	+		DZA65_RS13155	0.44	-1.6
2,820,942	+		DZA65_RS13155	0.44	+0.1
2,820,942	+		DZA65_RS13155	0.44	+0.5
2,820,942	+		DZA65_RS13155	0.44	+1.0
2,820,942	+		DZA65_RS13155	0.44	-0.8
2,820,944	+		DZA65_RS13155	0.44	-0.8
2,820,944	+		DZA65_RS13155	0.44	-0.4
2,820,945	-		DZA65_RS13155	0.44	-0.5
2,820,945	-		DZA65_RS13155	0.44	+0.7
2,820,990	-		DZA65_RS13155	0.47	+0.2
2,821,004	-		DZA65_RS13155	0.48	-0.8
2,821,004	-		DZA65_RS13155	0.48	-0.3
2,821,045	-		DZA65_RS13155	0.51	+0.2
2,821,045	-		DZA65_RS13155	0.51	+1.0
2,821,155	+		DZA65_RS13155	0.59	+0.8
2,821,155	+		DZA65_RS13155	0.59	-1.3
2,821,155	+		DZA65_RS13155	0.59	-0.4
2,821,155	+		DZA65_RS13155	0.59	-0.6
2,821,155	+		DZA65_RS13155	0.59	-1.4
2,821,155	+		DZA65_RS13155	0.59	+0.2
2,821,155	+		DZA65_RS13155	0.59	-0.4
2,821,156	-				+1.0
2,821,156	-		DZA65_RS13155	0.59	+1.4
2,821,156	-		DZA65_RS13155	0.59	-1.3
2,821,156	-		DZA65_RS13155	0.59	-1.2
2,821,156	-		DZA65_RS13155	0.59	+0.3
2,821,327	+		DZA65_RS13155	0.72	-0.9
2,821,327	+		DZA65_RS13155	0.72	-1.9
2,821,327	+		DZA65_RS13155	0.72	-1.1
2,821,328	-		DZA65_RS13155	0.72	+0.0
2,821,328	-		DZA65_RS13155	0.72	-1.2
2,821,328	-		DZA65_RS13155	0.72	-0.6
2,821,328	-		DZA65_RS13155	0.72	-0.6
2,821,340	-		DZA65_RS13155	0.72	-0.3
2,821,373	+		DZA65_RS13155	0.75	-1.0
2,821,374	-		DZA65_RS13155	0.75	+0.0
2,821,374	-		DZA65_RS13155	0.75	+0.0
2,821,374	-		DZA65_RS13155	0.75	-1.8
2,821,374	-		DZA65_RS13155	0.75	+0.3
2,821,374	-				-1.0
2,821,374	-		DZA65_RS13155	0.75	-0.9
2,821,473	+		DZA65_RS13155	0.82	-0.3
2,821,474	-		DZA65_RS13155	0.82	+0.8
2,821,474	-		DZA65_RS13155	0.82	-0.4
2,821,484	+		DZA65_RS13155	0.83	+0.1
2,821,485	-		DZA65_RS13155	0.83	+0.0
2,821,485	-		DZA65_RS13155	0.83	+0.2
2,821,485	-		DZA65_RS13155	0.83	+0.5
2,821,526	+		DZA65_RS13155	0.86	-0.4
2,821,573	+		DZA65_RS13155	0.89	+0.4
2,821,573	+		DZA65_RS13155	0.89	-0.2
2,821,575	+		DZA65_RS13155	0.90	+0.0
2,821,575	+		DZA65_RS13155	0.90	-1.3
2,821,575	+		DZA65_RS13155	0.90	+0.0
2,821,575	+		DZA65_RS13155	0.90	-1.2
2,821,575	+		DZA65_RS13155	0.90	-1.3
2,821,575	+		DZA65_RS13155	0.90	-0.5
2,821,575	+		DZA65_RS13155	0.90	+0.0
2,821,575	+		DZA65_RS13155	0.90	-0.8
2,821,576	-		DZA65_RS13155	0.90	+0.0
2,821,576	-		DZA65_RS13155	0.90	-0.3
2,821,576	-				+0.4
2,821,576	-		DZA65_RS13155	0.90	-1.3
2,821,576	-		DZA65_RS13155	0.90	-0.2
2,821,576	-		DZA65_RS13155	0.90	-1.6
2,821,576	-		DZA65_RS13155	0.90	+0.0
2,821,576	-		DZA65_RS13155	0.90	-0.6
2,821,762	-				-0.1
2,821,762	-				-0.3
2,821,762	-				-0.5
2,821,767	+				+1.9
2,821,767	+				+0.5
2,821,767	+				+0.0
2,821,767	+				+1.1
2,821,768	-				+0.8
2,821,768	-				+1.4
2,821,768	-				+0.6
2,821,837	+				-2.0
2,821,887	-		DZA65_RS13160	0.10	+0.4
2,821,887	-		DZA65_RS13160	0.10	-0.1
2,821,887	-		DZA65_RS13160	0.10	+2.0
2,821,887	-		DZA65_RS13160	0.10	-1.1
2,821,967	-				-0.4
2,821,979	+				-0.2
2,821,979	+				-1.8
2,821,980	-				-0.3
2,821,988	+				-0.8
2,822,039	+				-0.6
2,822,080	+				-1.2
2,822,081	-				+0.5
2,822,155	+				+0.9
2,822,156	-				+0.0
2,822,250	+		DZA65_RS13165	0.11	+0.2
2,822,250	+		DZA65_RS13165	0.11	+0.0
2,822,251	-		DZA65_RS13165	0.11	-0.6
2,822,251	-		DZA65_RS13165	0.11	-0.4
2,822,251	-		DZA65_RS13165	0.11	-0.4
2,822,528	+		DZA65_RS13165	0.71	+0.1
2,822,528	+		DZA65_RS13165	0.71	-0.1
2,822,528	+		DZA65_RS13165	0.71	+1.3
2,822,528	+		DZA65_RS13165	0.71	-0.8
2,822,528	+		DZA65_RS13165	0.71	-0.4
2,822,528	+		DZA65_RS13165	0.71	-0.9
2,822,528	+		DZA65_RS13165	0.71	-0.2
2,822,529	-		DZA65_RS13165	0.71	+0.2
2,822,529	-		DZA65_RS13165	0.71	+0.3
2,822,529	-		DZA65_RS13165	0.71	-1.2
2,822,529	-		DZA65_RS13165	0.71	-0.5
2,822,529	-		DZA65_RS13165	0.71	+0.6
2,822,529	-		DZA65_RS13165	0.71	+0.8
2,822,529	-		DZA65_RS13165	0.71	+0.2
2,822,529	-		DZA65_RS13165	0.71	-0.6
2,822,529	-		DZA65_RS13165	0.71	-0.6
2,822,529	-		DZA65_RS13165	0.71	+1.9
2,822,543	+		DZA65_RS13165	0.74	+0.0
2,822,543	+		DZA65_RS13165	0.74	+0.8
2,822,543	+		DZA65_RS13165	0.74	-0.8
2,822,543	+		DZA65_RS13165	0.74	-0.5
2,822,544	-		DZA65_RS13165	0.74	-0.4
2,822,544	-		DZA65_RS13165	0.74	-0.1
2,822,576	+		DZA65_RS13165	0.81	-1.3
2,822,576	+		DZA65_RS13165	0.81	-1.0
2,822,576	+		DZA65_RS13165	0.81	-0.1
2,822,577	-		DZA65_RS13165	0.82	-0.6
2,822,577	-		DZA65_RS13165	0.82	-1.0
2,822,577	-		DZA65_RS13165	0.82	-1.1
2,822,577	-		DZA65_RS13165	0.82	+0.3
2,822,577	-		DZA65_RS13165	0.82	-0.8
2,822,585	+		DZA65_RS13165	0.83	+1.0
2,822,585	+		DZA65_RS13165	0.83	-0.1
2,822,631	+				-1.6
2,822,650	-				+0.3
2,822,650	-				-0.5
2,822,689	-				-0.8