Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12805

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,742,633	-		DZA65_RS12800	0.84	-0.8
2,742,728	+		DZA65_RS12800	0.87	+0.1
2,742,729	-		DZA65_RS12800	0.87	+0.0
2,742,790	+		DZA65_RS12800	0.88	-0.4
2,742,790	+		DZA65_RS12800	0.88	-0.0
2,742,790	+		DZA65_RS12800	0.88	-0.1
2,742,844	-		DZA65_RS12800	0.90	-0.1
2,742,875	+				-0.8
2,742,876	-				-1.1
2,743,044	+				-0.9
2,743,045	-				-1.2
2,743,045	-				-0.8
2,743,045	-				-1.0
2,743,200	+				-0.2
2,743,200	+				+0.4
2,743,200	+				+0.1
2,743,208	+				+0.5
2,743,208	+				+0.5
2,743,208	+				+0.6
2,743,257	+				+0.4
2,743,258	-				+0.4
2,743,258	-				-0.7
2,743,349	+				+0.3
2,743,360	+				+0.4
2,743,360	+				+0.3
2,743,361	-				+1.0
2,743,371	+				-1.3
2,743,381	+				-0.4
2,743,382	-				-0.4
2,743,392	+				-2.4
2,743,393	-				+0.5
2,743,393	-				+0.3
2,743,393	-				-0.3
2,743,393	-				+0.0
2,743,396	+				-0.2
2,743,397	-				+0.3
2,743,434	+				+0.5
2,743,434	+				-0.9
2,743,436	+				+0.7
2,743,436	+				+0.0
2,743,437	-				-0.5
2,743,437	-				+0.9
2,743,437	-				+0.1
2,743,519	-				-0.6
2,743,547	-				-0.3
2,743,588	+				-2.0
2,743,588	+				+0.6
2,743,588	+				+1.0
2,743,588	+				-0.8
2,743,615	-				+0.0
2,743,624	+				-2.0
2,743,624	+				+0.3
2,743,625	-				+0.8
2,743,633	+				+1.2
2,743,658	-				+0.3
2,743,892	+		DZA65_RS12805	0.48	-1.3
2,743,892	+		DZA65_RS12805	0.48	-0.1
2,743,892	+		DZA65_RS12805	0.48	-1.2
2,743,893	-		DZA65_RS12805	0.48	-0.2
2,743,893	-		DZA65_RS12805	0.48	-1.4
2,744,234	-				-0.4
2,744,307	+				+1.0
2,744,307	+				-1.6
2,744,308	-				+0.0
2,744,308	-				+1.0
2,744,308	-				-0.6
2,744,323	+				-0.1
2,744,323	+				-0.6
2,744,323	+				-1.6
2,744,324	-				+0.6
2,744,324	-				-1.6
2,744,379	-		DZA65_RS12810	0.28	+0.3
2,744,392	+		DZA65_RS12810	0.33	+1.4
2,744,393	-		DZA65_RS12810	0.33	-0.5
2,744,432	-		DZA65_RS12810	0.48	-0.3
2,744,587	-				+0.1
2,744,594	+				-0.2
2,744,684	+				-2.7
2,744,740	-				-0.6
2,744,808	+				+0.3
2,744,808	+				-0.5
2,744,808	+				+0.6
2,744,808	+				-0.5
2,744,808	+				+0.0
2,744,808	+				-1.5
2,744,808	+				-0.1
2,744,808	+				+0.2
2,744,808	+				+1.0
2,744,809	-				+0.8
2,744,809	-				-0.2
2,744,809	-				+0.8
2,744,809	-				+0.5
2,744,809	-				-0.9
2,744,810	+				+0.4
2,744,810	+				-1.1
2,744,810	+				-0.1
2,744,811	-				-0.0
2,744,811	-				-0.7
2,744,811	-				+0.0
2,744,811	-				+0.5
2,744,917	-		DZA65_RS12815	0.12	-0.4
2,745,033	+		DZA65_RS12815	0.17	-0.6
2,745,033	+		DZA65_RS12815	0.17	+0.6
2,745,033	+		DZA65_RS12815	0.17	-0.7
2,745,034	-		DZA65_RS12815	0.17	+0.2
2,745,040	+		DZA65_RS12815	0.17	+0.4
2,745,040	+		DZA65_RS12815	0.17	-0.9
2,745,047	-		DZA65_RS12815	0.17	-2.3
2,745,158	+		DZA65_RS12815	0.22	+0.0
2,745,158	+		DZA65_RS12815	0.22	+0.1
2,745,158	+		DZA65_RS12815	0.22	+0.6
2,745,158	+		DZA65_RS12815	0.22	-0.4
2,745,159	-		DZA65_RS12815	0.22	-0.2
2,745,159	-		DZA65_RS12815	0.22	-1.0
2,745,159	-		DZA65_RS12815	0.22	+0.1
2,745,159	-		DZA65_RS12815	0.22	+0.0
2,745,159	-		DZA65_RS12815	0.22	+0.3
2,745,167	+		DZA65_RS12815	0.22	-0.9
2,745,169	+		DZA65_RS12815	0.22	-0.2
2,745,169	+		DZA65_RS12815	0.22	+0.4
2,745,169	+		DZA65_RS12815	0.22	-0.8
2,745,170	-		DZA65_RS12815	0.22	-1.4
2,745,170	-		DZA65_RS12815	0.22	-0.2