Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12575

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,694,164	+		DZA65_RS12570	0.64	-0.6
2,694,164	+		DZA65_RS12570	0.64	+0.7
2,694,164	+		DZA65_RS12570	0.64	+0.4
2,694,165	-		DZA65_RS12570	0.64	-0.4
2,694,165	-		DZA65_RS12570	0.64	-0.1
2,694,165	-		DZA65_RS12570	0.64	+0.0
2,694,165	-		DZA65_RS12570	0.64	+0.5
2,694,179	-		DZA65_RS12570	0.64	+0.2
2,694,422	+		DZA65_RS12570	0.76	-0.1
2,694,422	+		DZA65_RS12570	0.76	-2.8
2,694,422	+		DZA65_RS12570	0.76	-1.7
2,694,422	+		DZA65_RS12570	0.76	-0.8
2,694,422	+		DZA65_RS12570	0.76	-2.5
2,694,423	-		DZA65_RS12570	0.76	+0.6
2,694,423	-		DZA65_RS12570	0.76	+0.1
2,694,423	-		DZA65_RS12570	0.76	+0.0
2,694,424	+		DZA65_RS12570	0.76	-0.6
2,694,509	+		DZA65_RS12570	0.80	+0.1
2,694,510	-		DZA65_RS12570	0.80	-0.7
2,694,520	+		DZA65_RS12570	0.80	-1.8
2,694,520	+		DZA65_RS12570	0.80	-0.2
2,694,520	+		DZA65_RS12570	0.80	+1.0
2,694,521	-		DZA65_RS12570	0.80	-0.4
2,694,521	-		DZA65_RS12570	0.80	-1.0
2,694,674	-		DZA65_RS12570	0.87	-0.0
2,694,674	-		DZA65_RS12570	0.87	+0.2
2,694,756	-				+0.8
2,694,808	+				+0.5
2,694,808	+				+0.7
2,694,809	-				-0.7
2,694,809	-				+1.5
2,694,809	-				-0.3
2,694,814	+				-0.4
2,694,815	-				+1.2
2,694,902	-				-0.2
2,694,947	+				-1.6
2,694,948	-				+0.8
2,694,948	-				+0.1
2,694,948	-				+0.2
2,694,948	-				-0.4
2,694,951	+				-0.5
2,694,951	+				-0.4
2,694,951	+				-2.0
2,694,952	-				+0.4
2,694,952	-				+0.3
2,694,952	-				+0.2
2,694,969	-				-0.8
2,694,969	-				-1.5
2,695,076	-		DZA65_RS12575	0.26	-0.9
2,695,140	+		DZA65_RS12575	0.55	-0.7
2,695,140	+		DZA65_RS12575	0.55	-0.7
2,695,141	-		DZA65_RS12575	0.55	-1.2
2,695,169	+		DZA65_RS12575	0.68	+0.4
2,695,169	+		DZA65_RS12575	0.68	-0.9
2,695,192	+		DZA65_RS12575	0.78	-0.5
2,695,193	-		DZA65_RS12575	0.78	-0.2
2,695,210	+		DZA65_RS12575	0.86	-1.6
2,695,210	+		DZA65_RS12575	0.86	-0.7
2,695,211	-		DZA65_RS12575	0.86	-0.2
2,695,211	-		DZA65_RS12575	0.86	-0.3
2,695,328	+				-1.3
2,695,344	+				-0.7
2,695,345	-				+1.0
2,695,345	-				-0.6
2,695,382	-				+0.2
2,695,410	+				-0.5
2,695,412	+				-1.6
2,695,413	-				+0.6
2,695,413	-				+0.2
2,695,445	+				+1.7
2,695,463	+				-0.1
2,695,477	+				-2.9
2,695,478	-				-0.6
2,695,478	-				+0.6
2,695,552	+				-0.7
2,695,552	+				-1.0
2,695,553	-				+0.4
2,695,555	+				+0.2
2,695,586	+				-0.9
2,695,587	-				+0.2
2,695,587	-				-0.6
2,695,587	-				+0.0
2,695,587	-				+0.7
2,695,587	-				-0.6
2,695,628	+				-0.6
2,695,646	+				-0.3
2,695,689	-				-0.8
2,695,719	-				+0.0
2,695,734	+				-1.8
2,695,734	+				-2.0
2,695,735	-				-1.0
2,695,735	-				+0.4
2,695,735	-				-0.3
2,695,751	-				+0.2
2,695,751	-				-0.2
2,695,766	+				-0.4
2,695,766	+				+0.1
2,695,766	+				-0.4
2,695,767	-				+0.3
2,695,780	+				+0.6
2,695,805	-				+0.1
2,695,838	-				+0.7
2,695,838	-				+0.4
2,695,838	-				+0.2
2,695,843	+				-0.3
2,695,843	+				-2.5
2,695,843	+				-0.4
2,695,844	-				+0.0
2,695,844	-				+0.1
2,695,844	-				-1.0
2,695,900	+		DZA65_RS12580	0.25	+1.0
2,695,903	+		DZA65_RS12580	0.26	+0.8
2,695,904	-		DZA65_RS12580	0.27	-0.3
2,695,904	-		DZA65_RS12580	0.27	+0.1
2,695,935	+		DZA65_RS12580	0.42	-1.5
2,695,936	-		DZA65_RS12580	0.43	+0.1
2,696,051	-				+0.2
2,696,051	-				+1.0
2,696,061	+				+0.6
2,696,062	-				-0.9
2,696,062	-				+0.4
2,696,124	+				+0.3
2,696,124	+				+1.0
2,696,124	+				-0.3
2,696,124	+				-0.7
2,696,124	+				+0.5
2,696,125	-				+0.0
2,696,125	-				-0.2
2,696,125	-				-0.9
2,696,125	-				+0.2
2,696,125	-				-0.2
2,696,125	-				+1.0
2,696,125	-				-1.0
2,696,193	-		DZA65_RS12585	0.14	-0.7