Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12205

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,607,628	-				+0.6
2,607,632	+				+0.3
2,607,632	+				+1.3
2,607,632	+				-0.3
2,607,633	-				+1.6
2,607,670	+				-0.3
2,607,695	-				-1.6
2,607,724	-				+0.5
2,607,734	+		DZA65_RS12200	0.12	+0.9
2,607,766	+		DZA65_RS12200	0.17	-1.1
2,607,766	+		DZA65_RS12200	0.17	-2.0
2,607,767	-		DZA65_RS12200	0.18	-0.0
2,607,767	-		DZA65_RS12200	0.18	+0.6
2,607,767	-		DZA65_RS12200	0.18	+0.5
2,607,767	-		DZA65_RS12200	0.18	+0.7
2,607,804	-		DZA65_RS12200	0.24	+0.3
2,607,870	-		DZA65_RS12200	0.36	-1.3
2,608,057	+		DZA65_RS12200	0.70	+1.0
2,608,058	-		DZA65_RS12200	0.70	-0.4
2,608,071	+		DZA65_RS12200	0.72	-0.3
2,608,072	-		DZA65_RS12200	0.73	-0.1
2,608,098	+		DZA65_RS12200	0.77	-0.1
2,608,243	+				-0.9
2,608,243	+				-0.3
2,608,243	+				-2.6
2,608,459	+				-1.7
2,608,459	+				-0.3
2,608,459	+				-0.0
2,608,459	+				-0.3
2,608,459	+				+1.7
2,608,460	-				+0.4
2,608,460	-				-0.2
2,608,460	-				+0.5
2,608,499	+				+0.4
2,608,499	+				+0.3
2,608,499	+				-0.9
2,608,499	+				-0.6
2,608,499	+				-0.1
2,608,500	-				-0.1
2,608,500	-				-0.6
2,608,500	-				-0.6
2,608,500	-				-0.4
2,608,500	-				+0.8
2,608,500	-				-0.2
2,608,500	-				-0.2
2,608,500	-				-0.6
2,608,609	-				-0.3
2,609,149	+		DZA65_RS12205	0.52	-0.4
2,609,150	-		DZA65_RS12205	0.52	-1.0
2,609,150	-		DZA65_RS12205	0.52	+0.6
2,609,150	-		DZA65_RS12205	0.52	-0.3
2,609,152	+				+0.3
2,609,152	+		DZA65_RS12205	0.52	-1.0
2,609,153	-				+1.0
2,609,153	-		DZA65_RS12205	0.52	-1.0
2,609,153	-		DZA65_RS12205	0.52	+0.1
2,609,244	+		DZA65_RS12205	0.60	-0.1
2,609,245	-		DZA65_RS12205	0.60	-1.1
2,609,245	-		DZA65_RS12205	0.60	+1.0
2,609,245	-		DZA65_RS12205	0.60	-0.6
2,609,245	-		DZA65_RS12205	0.60	+0.5
2,609,249	+		DZA65_RS12205	0.60	-0.1
2,609,249	+		DZA65_RS12205	0.60	-1.6
2,609,250	-		DZA65_RS12205	0.60	-0.5
2,609,355	+		DZA65_RS12205	0.69	-1.9
2,609,355	+		DZA65_RS12205	0.69	-1.7
2,609,355	+		DZA65_RS12205	0.69	-0.5
2,609,356	-		DZA65_RS12205	0.69	-0.1
2,609,356	-		DZA65_RS12205	0.69	+0.1
2,609,356	-		DZA65_RS12205	0.69	-0.2
2,609,401	-		DZA65_RS12205	0.73	-1.9
2,609,447	+		DZA65_RS12205	0.77	-0.2
2,609,448	-		DZA65_RS12205	0.77	-2.1
2,609,874	+				-1.4
2,609,874	+				+0.1
2,609,875	-				+0.5
2,609,905	+				-0.3
2,609,905	+				-0.0
2,609,905	+				-1.3
2,609,905	+				+1.7
2,609,906	-				-0.4
2,609,906	-				-0.5
2,609,906	-				-0.0
2,609,906	-				+0.3
2,610,084	+		DZA65_RS12210	0.17	-0.3
2,610,085	-		DZA65_RS12210	0.17	+0.1
2,610,424	+		DZA65_RS12210	0.34	-0.4
2,610,424	+		DZA65_RS12210	0.34	+0.1
2,610,424	+		DZA65_RS12210	0.34	+1.0
2,610,424	+		DZA65_RS12210	0.34	-1.8
2,610,425	-		DZA65_RS12210	0.34	-0.3
2,610,425	-		DZA65_RS12210	0.34	+0.3
2,610,425	-		DZA65_RS12210	0.34	-0.1
2,610,425	-		DZA65_RS12210	0.34	+2.0
2,610,473	+		DZA65_RS12210	0.36	+0.6
2,610,544	-		DZA65_RS12210	0.39	+1.6
2,610,544	-		DZA65_RS12210	0.39	+0.4
2,610,594	+		DZA65_RS12210	0.42	-0.3
2,610,594	+		DZA65_RS12210	0.42	-0.2
2,610,594	+		DZA65_RS12210	0.42	-0.3
2,610,595	-		DZA65_RS12210	0.42	-0.6