Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11635

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,481,836	-				+0.4
2,481,874	-				-0.6
2,481,956	+				+0.2
2,481,956	+				-1.6
2,481,957	-				-2.2
2,481,972	-				-0.1
2,482,070	+		DZA65_RS11625	0.15	-1.3
2,482,070	+		DZA65_RS11625	0.15	-0.1
2,482,071	-		DZA65_RS11625	0.15	-0.0
2,482,071	-		DZA65_RS11625	0.15	-0.9
2,482,071	-		DZA65_RS11625	0.15	-2.0
2,482,085	+		DZA65_RS11625	0.19	-1.2
2,482,085	+		DZA65_RS11625	0.19	+0.3
2,482,085	+		DZA65_RS11625	0.19	+0.5
2,482,086	-		DZA65_RS11625	0.19	-1.8
2,482,086	-		DZA65_RS11625	0.19	-3.5
2,482,088	+		DZA65_RS11625	0.20	-0.8
2,482,088	+		DZA65_RS11625	0.20	-0.2
2,482,088	+		DZA65_RS11625	0.20	-0.3
2,482,089	-		DZA65_RS11625	0.20	-0.0
2,482,089	-		DZA65_RS11625	0.20	-1.6
2,482,310	-		DZA65_RS11625	0.84	+0.3
2,482,547	+		DZA65_RS11630	0.69	-1.6
2,482,547	+		DZA65_RS11630	0.69	+0.7
2,482,547	+		DZA65_RS11630	0.69	+0.0
2,482,547	+		DZA65_RS11630	0.69	-0.0
2,482,547	+		DZA65_RS11630	0.69	+0.6
2,482,547	+		DZA65_RS11630	0.69	-0.3
2,482,547	+		DZA65_RS11630	0.69	+0.3
2,482,548	-		DZA65_RS11630	0.69	-1.8
2,482,548	-		DZA65_RS11630	0.69	+0.4
2,482,548	-		DZA65_RS11630	0.69	+0.3
2,482,548	-		DZA65_RS11630	0.69	+2.0
2,482,548	-		DZA65_RS11630	0.69	-0.9
2,482,595	-				+0.1
2,482,630	+				+1.6
2,482,631	-				-0.3
2,482,686	+				-0.8
2,482,686	+				-0.3
2,482,686	+				-0.2
2,482,686	+				+0.1
2,482,687	-				-1.6
2,482,687	-				-0.0
2,482,741	-				-0.3
2,482,741	-				+1.0
2,482,741	-				-0.0
2,482,746	+				-0.0
2,482,752	+				+0.5
2,482,752	+				+1.6
2,482,753	-				+0.7
2,482,771	+				-2.2
2,482,771	+				+0.7
2,482,771	+				+0.6
2,482,771	+				-1.6
2,482,772	-				-0.5
2,482,772	-				-0.3
2,482,786	+				+0.1
2,482,815	+				-0.7
2,482,815	+				-0.3
2,482,816	-				+0.3
2,483,164	+		DZA65_RS11635	0.30	-0.9
2,483,165	-		DZA65_RS11635	0.30	+1.4
2,483,165	-		DZA65_RS11635	0.30	+0.2
2,483,165	-		DZA65_RS11635	0.30	+0.8
2,483,165	-		DZA65_RS11635	0.30	+0.5
2,483,311	-		DZA65_RS11635	0.41	-0.4
2,483,311	-		DZA65_RS11635	0.41	-0.3
2,483,311	-		DZA65_RS11635	0.41	-0.9
2,483,326	+		DZA65_RS11635	0.42	-0.4
2,483,327	-		DZA65_RS11635	0.42	-0.6
2,483,356	+		DZA65_RS11635	0.44	+0.7
2,483,356	+		DZA65_RS11635	0.44	+0.7
2,483,357	-		DZA65_RS11635	0.44	+1.1
2,483,357	-		DZA65_RS11635	0.44	+0.3
2,483,357	-		DZA65_RS11635	0.44	+0.3
2,483,357	-		DZA65_RS11635	0.44	+0.2
2,483,377	+		DZA65_RS11635	0.46	-0.6
2,483,378	-		DZA65_RS11635	0.46	-0.4
2,483,378	-		DZA65_RS11635	0.46	-1.0
2,483,413	+		DZA65_RS11635	0.48	-0.8
2,483,413	+		DZA65_RS11635	0.48	-0.5
2,483,413	+		DZA65_RS11635	0.48	-0.2
2,483,413	+		DZA65_RS11635	0.48	+0.4
2,483,413	+		DZA65_RS11635	0.48	-0.2
2,483,414	-				+1.0
2,483,414	-		DZA65_RS11635	0.48	+0.8
2,483,733	-		DZA65_RS11635	0.71	+0.2
2,483,768	+		DZA65_RS11635	0.74	-0.4
2,483,768	+		DZA65_RS11635	0.74	-0.2
2,483,769	-		DZA65_RS11635	0.74	+0.4
2,483,917	+		DZA65_RS11635	0.85	+0.1
2,483,935	+		DZA65_RS11635	0.86	+1.0
2,483,935	+		DZA65_RS11635	0.86	+0.2
2,483,968	-		DZA65_RS11635	0.89	-0.3
2,483,980	-		DZA65_RS11635	0.89	+0.7
2,483,980	-		DZA65_RS11635	0.89	-1.7
2,483,986	-		DZA65_RS11635	0.90	-0.1
2,484,058	+				+0.3
2,484,098	+				-0.8
2,484,121	+				-1.0
2,484,121	+				-0.5
2,484,121	+				-0.3
2,484,193	+				-1.0
2,484,193	+				+0.2
2,484,211	-		DZA65_RS11640	0.12	+0.6
2,484,440	+		DZA65_RS11640	0.48	-0.3
2,484,441	-		DZA65_RS11640	0.48	+0.5
2,484,623	-		DZA65_RS11640	0.78	-0.0
2,484,625	+		DZA65_RS11640	0.78	-0.0
2,484,625	+		DZA65_RS11640	0.78	-1.2
2,484,626	-		DZA65_RS11640	0.78	-0.5
2,484,626	-		DZA65_RS11640	0.78	+0.8
2,484,626	-		DZA65_RS11640	0.78	-0.4
2,484,626	-		DZA65_RS11640	0.78	-0.8
2,484,626	-		DZA65_RS11640	0.78	-0.2
2,484,667	+		DZA65_RS11640	0.85	+0.2
2,484,668	-		DZA65_RS11640	0.85	-0.0
2,484,668	-		DZA65_RS11640	0.85	+0.2
2,484,668	-		DZA65_RS11640	0.85	-0.7
2,484,679	+		DZA65_RS11640	0.87	-0.6
2,484,680	-		DZA65_RS11640	0.87	-0.6
2,484,761	-				-0.3
2,484,790	+				-0.9
2,484,790	+				+0.6
2,484,791	-				-0.3
2,484,791	-				+1.4
2,484,812	+				-0.3
2,484,812	+				-0.6
2,484,813	-				+1.0
2,484,819	-				-0.7
2,484,865	+				-0.1
2,484,876	-				-1.1
2,484,876	-				+0.1
2,484,880	+				+0.4
2,484,881	-				+1.6
2,484,891	-				-0.0
2,484,930	-				+0.6
2,484,930	-				+0.1
2,484,977	+				-0.0
2,484,977	+				-0.7
2,484,977	+				+0.4
2,484,979	+				+0.9
2,484,997	+				+0.1
2,485,017	-				-0.5
2,485,017	-				-0.5
2,485,022	+				-1.6
2,485,022	+				-0.4