Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11500

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,457,432	-		DZA65_RS11495	0.85	-0.2
2,457,432	-		DZA65_RS11495	0.85	-2.3
2,457,432	-		DZA65_RS11495	0.85	-0.2
2,457,432	-		DZA65_RS11495	0.85	-0.9
2,457,448	+		DZA65_RS11495	0.85	-1.3
2,457,448	+		DZA65_RS11495	0.85	-0.5
2,457,449	-		DZA65_RS11495	0.85	-0.4
2,457,449	-		DZA65_RS11495	0.85	-1.3
2,457,449	-		DZA65_RS11495	0.85	-0.3
2,457,449	-		DZA65_RS11495	0.85	+0.9
2,457,449	-		DZA65_RS11495	0.85	+0.5
2,457,483	+		DZA65_RS11495	0.86	+0.6
2,457,484	-		DZA65_RS11495	0.86	-0.1
2,457,487	+		DZA65_RS11495	0.86	-0.6
2,457,488	-		DZA65_RS11495	0.86	+0.6
2,457,488	-		DZA65_RS11495	0.86	-0.3
2,457,540	+		DZA65_RS11495	0.87	-1.2
2,457,541	-		DZA65_RS11495	0.87	+1.3
2,457,603	-		DZA65_RS11495	0.88	-0.7
2,457,612	+		DZA65_RS11495	0.88	+0.2
2,457,661	-		DZA65_RS11495	0.89	-0.1
2,457,723	+				-0.3
2,457,789	+				-0.6
2,457,789	+				-2.6
2,457,790	-				-0.7
2,457,793	+				-0.8
2,457,793	+				-0.1
2,457,793	+				+0.4
2,457,793	+				-0.2
2,457,794	-				-1.5
2,457,794	-				+0.4
2,457,794	-				-0.4
2,457,964	-				-0.4
2,457,964	-				+1.2
2,457,964	-				+0.4
2,457,964	-				-0.8
2,458,164	+				+0.6
2,458,165	-				+1.0
2,458,165	-				+0.0
2,458,173	+				-0.5
2,458,174	-				-0.3
2,458,174	-				-1.1
2,458,174	-				-0.1
2,458,209	-				+0.3
2,458,212	+				+0.3
2,458,212	+				-1.2
2,458,212	+				-0.4
2,458,213	-				+0.0
2,458,213	-				+1.0
2,458,225	+				-0.3
2,458,226	-				-0.6
2,458,226	-				-0.5
2,458,228	+				-0.6
2,458,228	+				-0.3
2,458,228	+				+0.2
2,458,229	-				+2.0
2,458,229	-				-0.3
2,458,229	-				-0.6
2,458,229	-				-0.3
2,458,229	-				+1.8
2,458,229	-				+0.0
2,458,229	-				-0.2
2,458,229	-				+1.0
2,458,229	-				+0.4
2,458,229	-				-0.2
2,458,229	-				+0.2
2,458,229	-				-1.7
2,458,229	-				+0.3
2,458,229	-				-0.7
2,458,229	-				-0.6
2,458,235	+				+2.6
2,458,235	+				-1.3
2,458,236	-				+1.2
2,458,236	-				-0.8
2,458,236	-				-0.5
2,458,238	-				-0.1
2,458,320	+				+0.1
2,458,407	+				-0.3
2,458,407	+				+0.3
2,458,407	+				-0.1
2,458,408	-				-0.4
2,458,408	-				-0.9
2,458,408	-				+0.0
2,458,408	-				+0.7
2,458,408	-				+0.5
2,458,416	+				-0.3
2,458,435	-				-0.2
2,458,609	-		DZA65_RS11500	0.19	-0.6
2,458,854	-		DZA65_RS11500	0.42	+0.3
2,459,031	+		DZA65_RS11500	0.59	-0.1
2,459,031	+		DZA65_RS11500	0.59	-0.2
2,459,355	+		DZA65_RS11500	0.90	-1.0
2,459,482	+				-1.3
2,459,483	-				+0.2
2,459,483	-				+0.8
2,459,523	+				+2.2
2,459,524	-				-0.3
2,459,524	-				-1.7
2,459,524	-				+1.0
2,459,592	-				-0.5
2,459,592	-				-0.2
2,459,607	-				+0.6
2,459,607	-				+0.7
2,459,609	+				+0.4
2,459,609	+				+1.4
2,459,609	+				+0.1
2,459,609	+				-0.7
2,459,609	+				-0.3
2,459,609	+				-1.2
2,459,610	-				+0.3
2,459,610	-				+1.3
2,459,610	-				+0.6
2,459,610	-				-0.9
2,459,610	-				+1.3
2,459,610	-				-1.0
2,459,714	+				-0.6
2,459,715	-				-2.2
2,459,735	+				-0.6
2,459,735	+				-1.2
2,459,735	+				+0.3
2,459,735	+				+1.0
2,460,026	+		DZA65_RS11505	0.24	-0.1
2,460,026	+		DZA65_RS11505	0.24	+0.6
2,460,027	-		DZA65_RS11505	0.24	-0.0
2,460,027	-		DZA65_RS11505	0.24	-0.4
2,460,028	+		DZA65_RS11505	0.24	+0.2
2,460,028	+		DZA65_RS11505	0.24	-0.2
2,460,028	+		DZA65_RS11505	0.24	-0.9
2,460,028	+		DZA65_RS11505	0.24	-0.1
2,460,028	+		DZA65_RS11505	0.24	+1.2
2,460,028	+		DZA65_RS11505	0.24	+1.0
2,460,028	+		DZA65_RS11505	0.24	+0.1
2,460,028	+		DZA65_RS11505	0.24	-0.4
2,460,028	+		DZA65_RS11505	0.24	+0.7
2,460,028	+		DZA65_RS11505	0.24	-0.0
2,460,028	+		DZA65_RS11505	0.24	+0.4
2,460,029	-		DZA65_RS11505	0.24	-1.8
2,460,029	-		DZA65_RS11505	0.24	-0.1
2,460,029	-		DZA65_RS11505	0.24	+2.0
2,460,029	-		DZA65_RS11505	0.24	-0.3
2,460,029	-		DZA65_RS11505	0.24	-0.1
2,460,029	-		DZA65_RS11505	0.24	-0.2
2,460,029	-		DZA65_RS11505	0.24	-2.0
2,460,029	-		DZA65_RS11505	0.24	+0.3
2,460,029	-		DZA65_RS11505	0.24	-0.0
2,460,029	-		DZA65_RS11505	0.24	-0.8
2,460,029	-		DZA65_RS11505	0.24	+0.9
2,460,029	-		DZA65_RS11505	0.24	+1.0
2,460,029	-		DZA65_RS11505	0.24	-1.3
2,460,029	-		DZA65_RS11505	0.24	+0.7
2,460,029	-		DZA65_RS11505	0.24	+0.6
2,460,029	-		DZA65_RS11505	0.24	+0.5
2,460,029	-		DZA65_RS11505	0.24	-0.2
2,460,266	+		DZA65_RS11505	0.37	+0.0
2,460,266	+		DZA65_RS11505	0.37	-0.8
2,460,398	+		DZA65_RS11505	0.44	+0.6
2,460,398	+		DZA65_RS11505	0.44	-0.4
2,460,398	+		DZA65_RS11505	0.44	-0.6
2,460,398	+		DZA65_RS11505	0.44	-1.6
2,460,399	-		DZA65_RS11505	0.44	+0.1
2,460,399	-				+0.6