Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10315

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,181,809	-				+0.0
2,181,893	+				+1.6
2,181,893	+				-1.1
2,181,893	+				-1.1
2,181,893	+				+0.7
2,181,893	+				-1.8
2,181,893	+				-0.2
2,181,893	+				-0.7
2,181,894	-				-1.8
2,181,894	-				+0.7
2,181,916	+				-1.0
2,181,917	-				+0.2
2,181,936	+				+0.1
2,181,936	+				-0.3
2,181,937	-				-0.4
2,181,970	-				-0.6
2,181,976	+				+1.4
2,181,976	+				-0.3
2,181,977	-				-2.1
2,182,003	+				+0.0
2,182,004	-				+0.4
2,182,015	+				-0.5
2,182,016	-				-0.4
2,182,016	-				-0.8
2,182,016	-				-1.4
2,182,020	+				+0.3
2,182,020	+				-1.4
2,182,020	+				+1.0
2,182,020	+				-1.0
2,182,020	+				-0.5
2,182,021	-				+1.1
2,182,021	-				-0.4
2,182,021	-				-0.5
2,182,031	+				-1.8
2,182,031	+				-0.5
2,182,031	+				-0.7
2,182,032	-				-0.8
2,182,032	-				-0.8
2,182,032	-				+0.0
2,182,039	-				+1.0
2,182,053	+				-2.0
2,182,082	-				+0.2
2,182,082	-				-0.3
2,182,082	-				-0.5
2,182,084	+				-2.1
2,182,098	-				-2.5
2,182,098	-				+0.3
2,182,116	+				+0.0
2,182,116	+				-0.4
2,182,117	-				+1.4
2,182,117	-				+0.2
2,182,275	-				+0.7
2,182,317	-				-1.0
2,182,317	-				-1.0
2,182,442	-				-1.3
2,182,442	-				-0.5
2,182,560	-				-1.5
2,182,579	+				-0.5
2,182,580	-				-0.5
2,182,596	-				-0.2
2,182,648	+				+0.0
2,182,648	+				+0.3
2,182,648	+				+0.2
2,182,648	+				+1.0
2,182,648	+				-0.2
2,182,649	-				-0.1
2,182,658	+				-0.0
2,182,659	-				-0.8
2,182,659	-				+0.1
2,182,686	+				-0.5
2,182,686	+				-0.9
2,182,686	+				-0.4
2,182,686	+				+0.0
2,182,686	+				-0.5
2,182,686	+				-0.5
2,182,687	-				-0.5
2,182,687	-				-0.5
2,182,687	-				-1.5
2,182,687	-				-1.0
2,182,687	-				+1.5
2,182,687	-				+0.6
2,182,687	-				+0.5
2,182,699	+				-0.5
2,182,700	-				-0.2
2,182,700	-				+0.3
2,182,700	-				+0.8
2,182,700	-				-0.2
2,182,731	+				+0.0
2,182,731	+				+0.0
2,182,731	+				+1.6
2,182,732	-				-0.7
2,182,749	+				-0.8
2,182,749	+				-0.1
2,182,750	-				+0.3
2,182,750	-				-0.4
2,182,750	-				-0.0
2,182,750	-				+1.0
2,182,750	-				-0.3
2,182,830	+		DZA65_RS10315	0.20	-0.6
2,182,831	-		DZA65_RS10315	0.20	+0.2
2,182,848	-		DZA65_RS10315	0.22	+0.5
2,182,848	-		DZA65_RS10315	0.22	-0.4
2,182,911	-		DZA65_RS10315	0.31	-0.3
2,183,063	+		DZA65_RS10315	0.51	+0.6
2,183,063	+		DZA65_RS10315	0.51	-0.8
2,183,064	-		DZA65_RS10315	0.52	+0.2
2,183,064	-				+0.0
2,183,064	-		DZA65_RS10315	0.52	+0.4
2,183,129	+		DZA65_RS10315	0.60	-0.2
2,183,133	+		DZA65_RS10315	0.61	-0.5
2,183,133	+		DZA65_RS10315	0.61	+1.5
2,183,133	+		DZA65_RS10315	0.61	+1.5
2,183,133	+		DZA65_RS10315	0.61	+0.5
2,183,134	-		DZA65_RS10315	0.61	+0.8
2,183,134	-		DZA65_RS10315	0.61	+1.0
2,183,134	-		DZA65_RS10315	0.61	+2.0
2,183,134	-				+1.0
2,183,134	-		DZA65_RS10315	0.61	+0.5
2,183,134	-		DZA65_RS10315	0.61	+0.0
2,183,134	-		DZA65_RS10315	0.61	+0.1
2,183,134	-		DZA65_RS10315	0.61	+0.6
2,183,136	-		DZA65_RS10315	0.61	-0.5
2,183,136	-		DZA65_RS10315	0.61	+2.0
2,183,136	-		DZA65_RS10315	0.61	-0.1
2,183,136	-		DZA65_RS10315	0.61	-0.0
2,183,156	+		DZA65_RS10315	0.64	+0.4
2,183,157	-		DZA65_RS10315	0.64	-0.4
2,183,157	-		DZA65_RS10315	0.64	-0.8
2,183,238	+		DZA65_RS10315	0.75	+0.4
2,183,264	+		DZA65_RS10315	0.79	-0.5
2,183,306	+		DZA65_RS10315	0.84	-0.2
2,183,431	+				+0.6
2,183,431	+				+0.3
2,183,431	+				-2.4
2,183,432	-				-1.1
2,183,453	-				-0.2
2,183,477	+				-1.0
2,183,680	+		DZA65_RS10320	0.32	-0.5
2,183,680	+		DZA65_RS10320	0.32	-1.7
2,183,680	+		DZA65_RS10320	0.32	+1.0
2,183,681	-		DZA65_RS10320	0.33	-0.1
2,183,681	-		DZA65_RS10320	0.33	+1.3
2,183,681	-		DZA65_RS10320	0.33	-1.5
2,183,902	+		DZA65_RS10320	0.71	-0.3
2,183,903	-		DZA65_RS10320	0.71	-0.2
2,183,965	+		DZA65_RS10320	0.81	+0.1
2,183,965	+		DZA65_RS10320	0.81	-0.2
2,183,966	-		DZA65_RS10320	0.82	-0.6
2,184,106	-				+0.8
2,184,120	-				+0.5
2,184,120	-				+0.2
2,184,120	-				-1.1
2,184,155	-				-0.1
2,184,155	-				+0.1
2,184,221	+		DZA65_RS10325	0.18	-0.5
2,184,242	+		DZA65_RS10325	0.22	-0.3
2,184,318	-		DZA65_RS10325	0.35	-0.2
2,184,344	+		DZA65_RS10325	0.40	-0.0
2,184,344	+		DZA65_RS10325	0.40	+1.0