Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09185

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,938,887	-		DZA65_RS09175	0.80	-0.2
1,938,934	+		DZA65_RS09175	0.82	-0.5
1,938,934	+		DZA65_RS09175	0.82	-0.3
1,938,934	+		DZA65_RS09175	0.82	+0.0
1,938,934	+		DZA65_RS09175	0.82	+0.4
1,938,935	-		DZA65_RS09175	0.82	-1.8
1,938,935	-		DZA65_RS09175	0.82	-1.4
1,938,970	+		DZA65_RS09175	0.85	-1.0
1,938,970	+		DZA65_RS09175	0.85	-0.3
1,938,970	+		DZA65_RS09175	0.85	+1.0
1,938,971	-		DZA65_RS09175	0.85	-1.0
1,938,971	-		DZA65_RS09175	0.85	+0.5
1,938,971	-		DZA65_RS09175	0.85	+0.5
1,938,971	-		DZA65_RS09175	0.85	-2.1
1,938,971	-		DZA65_RS09175	0.85	+0.2
1,938,974	+		DZA65_RS09175	0.85	+0.9
1,938,974	+		DZA65_RS09175	0.85	+0.0
1,938,974	+		DZA65_RS09175	0.85	-0.2
1,938,974	+		DZA65_RS09175	0.85	+0.5
1,938,974	+		DZA65_RS09175	0.85	+0.8
1,938,975	-		DZA65_RS09175	0.85	-2.1
1,939,033	+		DZA65_RS09175	0.88	+0.7
1,939,033	+		DZA65_RS09175	0.88	-0.1
1,939,268	+				+0.6
1,939,310	+				-0.2
1,939,310	+				+0.3
1,939,310	+				-0.5
1,939,310	+				+0.3
1,939,310	+				+0.3
1,939,310	+				-0.4
1,939,310	+				+0.4
1,939,310	+				+0.2
1,939,310	+				+0.0
1,939,310	+				+0.0
1,939,310	+				+0.2
1,939,311	-				-0.3
1,939,311	-				-0.2
1,939,311	-				+0.9
1,939,311	-				+0.8
1,939,311	-				-0.5
1,939,312	+				+0.0
1,939,312	+				+0.4
1,939,312	+				-0.3
1,939,313	-				-1.3
1,939,313	-				+0.5
1,939,313	-				-0.1
1,939,315	+				+1.0
1,939,315	+				+1.0
1,939,315	+				-0.1
1,939,316	-				-1.0
1,939,403	-				-0.2
1,939,421	+				+1.5
1,939,422	-				-1.4
1,939,422	-				-0.7
1,939,426	+				-0.2
1,939,426	+				-0.4
1,939,427	-				-1.1
1,939,465	-				-0.4
1,939,477	+				+0.2
1,939,478	-				-1.3
1,939,478	-				-0.9
1,939,478	-				-1.3
1,939,478	-				-1.2
1,939,540	+		DZA65_RS09180	0.29	-0.5
1,939,540	+		DZA65_RS09180	0.29	-0.4
1,939,627	+		DZA65_RS09180	0.61	-0.8
1,939,628	-		DZA65_RS09180	0.61	+0.0
1,939,651	-		DZA65_RS09180	0.70	-0.7
1,939,816	+				+0.4
1,939,816	+				-0.5
1,939,816	+				+0.2
1,939,816	+				-1.0
1,939,816	+				-0.1
1,939,816	+				-0.8
1,939,816	+				+0.8
1,939,816	+				+0.4
1,939,817	-				-1.9
1,939,817	-				+0.0
1,939,817	-				+0.0
1,939,817	-				+0.0
1,939,817	-				-0.2
1,939,817	-				-0.2
1,939,819	-				-0.5
1,939,819	-				-0.1
1,939,819	-				+0.4
1,939,860	+				+0.0
1,939,861	-				-0.1
1,939,899	+				+0.0
1,939,902	+				+0.2
1,939,902	+				+0.2
1,939,903	-				+0.4
1,939,915	+				+0.6
1,939,915	+				-1.3
1,939,915	+				-0.8
1,939,915	+				+0.5
1,939,915	+				-0.5
1,939,915	+				+0.7
1,939,915	+				+0.1
1,939,915	+				-0.1
1,939,915	+				+0.8
1,939,915	+				-2.0
1,939,916	-				-0.8
1,939,916	-				-0.6
1,939,916	-				+0.6
1,939,916	-				-2.5
1,939,916	-				+0.2
1,939,916	-				-1.3
1,939,916	-				-0.1
1,939,916	-				-1.1
1,940,014	+		DZA65_RS09185	0.26	+0.3
1,940,014	+		DZA65_RS09185	0.26	-1.8
1,940,014	+		DZA65_RS09185	0.26	+0.2
1,940,014	+		DZA65_RS09185	0.26	-0.1
1,940,014	+		DZA65_RS09185	0.26	-0.1
1,940,014	+		DZA65_RS09185	0.26	+0.9
1,940,014	+		DZA65_RS09185	0.26	-1.1
1,940,014	+		DZA65_RS09185	0.26	+0.6
1,940,014	+		DZA65_RS09185	0.26	+0.8
1,940,014	+		DZA65_RS09185	0.26	+0.5
1,940,014	+		DZA65_RS09185	0.26	-0.4
1,940,014	+		DZA65_RS09185	0.26	+0.4
1,940,015	-		DZA65_RS09185	0.26	+0.7
1,940,015	-		DZA65_RS09185	0.26	-0.3
1,940,015	-		DZA65_RS09185	0.26	-1.0
1,940,015	-		DZA65_RS09185	0.26	+0.5
1,940,015	-		DZA65_RS09185	0.26	-0.5
1,940,015	-		DZA65_RS09185	0.26	+0.7
1,940,015	-		DZA65_RS09185	0.26	-0.8
1,940,050	+		DZA65_RS09185	0.33	-1.5
1,940,098	+		DZA65_RS09185	0.42	-0.3
1,940,098	+		DZA65_RS09185	0.42	+0.4
1,940,098	+		DZA65_RS09185	0.42	-0.4
1,940,137	+		DZA65_RS09185	0.50	+0.5
1,940,138	-		DZA65_RS09185	0.50	+0.5
1,940,149	+		DZA65_RS09185	0.52	+1.3
1,940,149	+		DZA65_RS09185	0.52	+0.7
1,940,149	+		DZA65_RS09185	0.52	+0.2
1,940,150	-		DZA65_RS09185	0.52	-0.6
1,940,150	-		DZA65_RS09185	0.52	+2.3
1,940,194	+		DZA65_RS09185	0.61	-1.1
1,940,194	+				-1.5
1,940,195	-		DZA65_RS09185	0.61	-0.8
1,940,305	-		DZA65_RS09185	0.82	-0.3
1,940,335	-		DZA65_RS09185	0.88	+1.0
1,940,336	+		DZA65_RS09185	0.88	+0.3
1,940,336	+		DZA65_RS09185	0.88	-1.5
1,940,336	+		DZA65_RS09185	0.88	+0.5
1,940,336	+		DZA65_RS09185	0.88	-0.8
1,940,347	+				-1.1
1,940,361	+				-0.3
1,940,361	+				-0.2
1,940,361	+				-0.8
1,940,361	+				-0.4
1,940,361	+				-0.1
1,940,361	+				-0.7
1,940,361	+				-3.1
1,940,361	+				-0.5
1,940,361	+				-0.4
1,940,361	+				+1.2
1,940,361	+				+0.0
1,940,361	+				+0.7
1,940,362	-				-0.1
1,940,362	-				-1.1
1,940,362	-				+0.0
1,940,362	-				-1.9
1,940,362	-				+0.6
1,940,362	-				-0.1
1,940,362	-				-1.0
1,940,362	-				-0.3
1,940,487	-		DZA65_RS09190	0.12	-0.1
1,940,592	+		DZA65_RS09190	0.26	-0.1
1,940,592	+		DZA65_RS09190	0.26	+0.2
1,940,593	-		DZA65_RS09190	0.26	-0.2
1,940,593	-		DZA65_RS09190	0.26	-0.5
1,940,660	+		DZA65_RS09190	0.36	+0.0
1,940,661	-		DZA65_RS09190	0.36	-0.5
1,940,661	-		DZA65_RS09190	0.36	-0.6
1,940,760	-		DZA65_RS09190	0.49	-0.2
1,940,866	+		DZA65_RS09190	0.64	-1.3
1,940,866	+		DZA65_RS09190	0.64	-1.4
1,940,866	+		DZA65_RS09190	0.64	-1.3
1,940,867	-		DZA65_RS09190	0.64	-2.1
1,941,125	+				+0.0
1,941,125	+				+0.0
1,941,125	+				-0.2
1,941,125	+				-1.7
1,941,126	-				-1.3
1,941,128	-				+0.9
1,941,189	+		DZA65_RS09195	0.10	-0.4
1,941,189	+		DZA65_RS09195	0.10	+0.3
1,941,189	+		DZA65_RS09195	0.10	+0.1
1,941,190	-		DZA65_RS09195	0.10	-1.0
1,941,344	-		DZA65_RS09195	0.34	+0.8