Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08565

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,807,085	+				-1.1
1,807,085	+				-0.3
1,807,086	-				+0.2
1,807,108	+				+0.1
1,807,109	-				+0.8
1,807,311	+		DZA65_RS08560	0.30	-0.2
1,807,312	-		DZA65_RS08560	0.30	+0.6
1,807,422	+		DZA65_RS08560	0.41	-1.5
1,807,422	+		DZA65_RS08560	0.41	+0.1
1,807,422	+		DZA65_RS08560	0.41	-0.1
1,807,423	-		DZA65_RS08560	0.41	+0.1
1,807,551	+		DZA65_RS08560	0.54	-0.4
1,807,551	+		DZA65_RS08560	0.54	+0.3
1,807,551	+		DZA65_RS08560	0.54	+1.9
1,807,552	-		DZA65_RS08560	0.54	-0.1
1,807,552	-		DZA65_RS08560	0.54	-0.7
1,807,806	-		DZA65_RS08560	0.79	-0.1
1,807,806	-		DZA65_RS08560	0.79	+0.3
1,807,806	-		DZA65_RS08560	0.79	+0.6
1,807,806	-		DZA65_RS08560	0.79	-1.2
1,807,995	+				-0.7
1,807,995	+				-1.4
1,807,995	+				-2.4
1,807,996	-				+0.8
1,807,996	-				+1.2
1,808,019	+				+0.1
1,808,020	-				-0.5
1,808,020	-				+1.5
1,808,078	-				-0.6
1,808,202	+		DZA65_RS08565	0.14	-0.0
1,808,202	+		DZA65_RS08565	0.14	+0.1
1,808,202	+		DZA65_RS08565	0.14	+1.6
1,808,202	+		DZA65_RS08565	0.14	+1.9
1,808,203	-		DZA65_RS08565	0.15	-1.2
1,808,342	+		DZA65_RS08565	0.26	-0.5
1,808,343	-		DZA65_RS08565	0.26	+0.6
1,808,343	-		DZA65_RS08565	0.26	-1.1
1,808,343	-		DZA65_RS08565	0.26	+0.8
1,808,343	-		DZA65_RS08565	0.26	+1.3
1,808,382	+		DZA65_RS08565	0.29	-1.0
1,808,473	+		DZA65_RS08565	0.37	+0.8
1,808,473	+		DZA65_RS08565	0.37	+0.1
1,808,473	+		DZA65_RS08565	0.37	-1.4
1,808,590	+		DZA65_RS08565	0.46	-0.5
1,808,590	+		DZA65_RS08565	0.46	-0.6
1,808,590	+		DZA65_RS08565	0.46	+1.1
1,808,591	-				-1.2
1,808,591	-		DZA65_RS08565	0.46	-0.3
1,808,591	-		DZA65_RS08565	0.46	+0.7
1,808,591	-		DZA65_RS08565	0.46	+0.5
1,808,591	-		DZA65_RS08565	0.46	+0.8
1,808,591	-		DZA65_RS08565	0.46	+0.6
1,808,638	+		DZA65_RS08565	0.50	-1.0
1,808,639	-		DZA65_RS08565	0.50	-0.1
1,808,639	-		DZA65_RS08565	0.50	+1.4
1,808,639	-		DZA65_RS08565	0.50	+0.2
1,808,863	+		DZA65_RS08565	0.68	+0.2
1,808,888	+		DZA65_RS08565	0.70	-1.9
1,808,889	-		DZA65_RS08565	0.70	+0.8
1,808,924	-		DZA65_RS08565	0.73	-0.1
1,808,924	-		DZA65_RS08565	0.73	-0.9
1,808,974	+		DZA65_RS08565	0.77	+0.2
1,808,974	+		DZA65_RS08565	0.77	+0.5
1,808,974	+		DZA65_RS08565	0.77	-0.3
1,808,975	-		DZA65_RS08565	0.77	+0.8
1,808,975	-		DZA65_RS08565	0.77	+0.3
1,808,977	+		DZA65_RS08565	0.77	-0.2
1,808,977	+		DZA65_RS08565	0.77	-0.3
1,808,977	+		DZA65_RS08565	0.77	-0.5
1,808,977	+		DZA65_RS08565	0.77	-0.1
1,808,977	+		DZA65_RS08565	0.77	-0.1
1,808,977	+		DZA65_RS08565	0.77	+0.3
1,808,978	-				+0.5
1,808,978	-		DZA65_RS08565	0.78	+0.5
1,808,978	-		DZA65_RS08565	0.78	-1.0
1,808,978	-		DZA65_RS08565	0.78	+0.3
1,808,978	-		DZA65_RS08565	0.78	-0.3
1,809,134	+				-2.1
1,809,134	+				-0.3
1,809,134	+				-0.4
1,809,134	+				-1.9
1,809,134	+				+0.3
1,809,134	+				-0.4
1,809,134	+				+1.1
1,809,134	+				-0.6
1,809,134	+				-0.1
1,809,134	+				-1.4
1,809,135	-				-1.2
1,809,135	-				+0.2
1,809,135	-				+1.1
1,809,135	-				+1.1
1,809,135	-				-0.1
1,809,135	-				-1.3
1,809,135	-				+0.7
1,809,135	-				+0.1
1,809,135	-				-1.9
1,809,143	+				-0.1
1,809,143	+				-0.4
1,809,143	+				-0.2
1,809,143	+				-0.2
1,809,144	-				-0.2
1,809,144	-				-1.2
1,809,144	-				+0.2
1,809,144	-				+0.4
1,809,144	-				-1.2
1,809,144	-				+0.5
1,809,147	-				-0.5
1,809,203	+				-0.9
1,809,204	-				-0.7
1,809,204	-				-0.6
1,809,204	-				+0.1
1,809,204	-				-0.6
1,809,204	-				+0.3
1,809,204	-				-0.9
1,809,215	+				-0.2
1,809,215	+				-0.4
1,809,215	+				-0.9
1,809,216	-				-0.3
1,809,251	+				+0.1
1,809,251	+				-0.5
1,809,251	+				-0.8
1,809,251	+				+0.3
1,809,252	-				+1.1
1,809,266	+				-0.7
1,809,361	-		DZA65_RS08570	0.20	-1.1
1,809,559	+		DZA65_RS08570	0.57	+0.7
1,809,560	-		DZA65_RS08570	0.57	-0.7
1,809,560	-		DZA65_RS08570	0.57	-0.4
1,809,577	+		DZA65_RS08570	0.60	-1.8
1,809,577	+		DZA65_RS08570	0.60	+0.9
1,809,577	+		DZA65_RS08570	0.60	-0.3
1,809,577	+		DZA65_RS08570	0.60	+0.1
1,809,577	+		DZA65_RS08570	0.60	-0.9
1,809,577	+		DZA65_RS08570	0.60	+0.1
1,809,578	-		DZA65_RS08570	0.61	-0.3
1,809,578	-		DZA65_RS08570	0.61	-0.2
1,809,578	-		DZA65_RS08570	0.61	+0.3
1,809,604	+		DZA65_RS08570	0.65	-0.7
1,809,640	+		DZA65_RS08570	0.72	-1.2
1,809,640	+		DZA65_RS08570	0.72	-1.6
1,809,640	+		DZA65_RS08570	0.72	-0.3
1,809,640	+		DZA65_RS08570	0.72	-0.2
1,809,640	+		DZA65_RS08570	0.72	-0.5
1,809,640	+		DZA65_RS08570	0.72	+0.2
1,809,640	+		DZA65_RS08570	0.72	-0.3
1,809,640	+		DZA65_RS08570	0.72	-0.4
1,809,640	+		DZA65_RS08570	0.72	+0.7
1,809,640	+		DZA65_RS08570	0.72	-0.4
1,809,641	-		DZA65_RS08570	0.72	-0.4
1,809,641	-		DZA65_RS08570	0.72	+1.4
1,809,641	-		DZA65_RS08570	0.72	+1.1
1,809,641	-		DZA65_RS08570	0.72	-1.2
1,809,641	-		DZA65_RS08570	0.72	-0.8
1,809,641	-		DZA65_RS08570	0.72	-0.1
1,809,641	-		DZA65_RS08570	0.72	-1.2
1,809,641	-		DZA65_RS08570	0.72	+0.7
1,809,661	+		DZA65_RS08570	0.76	-0.5
1,809,661	+		DZA65_RS08570	0.76	+0.3
1,809,661	+		DZA65_RS08570	0.76	-0.4
1,809,661	+		DZA65_RS08570	0.76	+0.2
1,809,662	-		DZA65_RS08570	0.76	-1.1
1,809,662	-		DZA65_RS08570	0.76	-0.1
1,809,662	-		DZA65_RS08570	0.76	-0.2
1,809,662	-				-0.5
1,809,724	+		DZA65_RS08570	0.88	+2.2
1,809,724	+		DZA65_RS08570	0.88	-0.8
1,809,724	+		DZA65_RS08570	0.88	-0.1
1,809,725	-		DZA65_RS08570	0.88	-0.2
1,809,725	-		DZA65_RS08570	0.88	+1.0
1,809,725	-		DZA65_RS08570	0.88	-0.4
1,809,725	-		DZA65_RS08570	0.88	+0.0
1,809,725	-		DZA65_RS08570	0.88	+0.2
1,809,787	+				-0.2
1,809,787	+				-0.1
1,809,787	+				-0.9
1,809,787	+				-0.6
1,809,788	-				-1.7
1,809,791	+				-1.1
1,809,791	+				-1.9
1,809,791	+				+0.0
1,809,791	+				+0.4
1,809,791	+				-0.5
1,809,791	+				-1.1
1,809,791	+				-1.2
1,809,791	+				-1.5
1,809,791	+				-1.7
1,809,792	-				-0.8
1,809,792	-				-0.2
1,809,792	-				+0.2
1,809,792	-				-1.2
1,809,792	-				-0.2
1,809,792	-				-0.5
1,809,792	-				-1.1
1,809,792	-				-2.4
1,809,812	+				+0.1
1,809,877	-				+0.7
1,809,912	+				+0.1
1,809,918	+				+0.9
1,809,951	+		DZA65_RS08575	0.12	+0.8
1,809,951	+		DZA65_RS08575	0.12	-1.5
1,809,951	+		DZA65_RS08575	0.12	-0.7
1,809,951	+		DZA65_RS08575	0.12	-0.9
1,809,952	-		DZA65_RS08575	0.12	+0.8
1,809,952	-		DZA65_RS08575	0.12	-0.3
1,809,956	+		DZA65_RS08575	0.12	+0.5
1,809,956	+		DZA65_RS08575	0.12	-0.5
1,809,956	+		DZA65_RS08575	0.12	-0.3
1,809,957	-		DZA65_RS08575	0.12	-1.2
1,809,979	+		DZA65_RS08575	0.14	-0.7
1,810,012	+		DZA65_RS08575	0.16	+0.3
1,810,013	-		DZA65_RS08575	0.17	+0.8
1,810,089	+		DZA65_RS08575	0.22	-0.1
1,810,089	+				+1.6
1,810,089	+		DZA65_RS08575	0.22	-0.5
1,810,089	+		DZA65_RS08575	0.22	+0.1
1,810,090	-		DZA65_RS08575	0.22	+0.2
1,810,090	-		DZA65_RS08575	0.22	-0.3
1,810,090	-		DZA65_RS08575	0.22	-0.4