Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08495

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,789,629	+		DZA65_RS08485	0.22	+0.1
1,789,630	-		DZA65_RS08485	0.22	+1.1
1,789,630	-		DZA65_RS08485	0.22	-0.8
1,789,680	+				+0.7
1,789,680	+		DZA65_RS08485	0.30	-0.8
1,789,680	+		DZA65_RS08485	0.30	+0.3
1,789,680	+		DZA65_RS08485	0.30	-1.7
1,789,680	+		DZA65_RS08485	0.30	+0.1
1,789,680	+		DZA65_RS08485	0.30	-0.5
1,789,680	+		DZA65_RS08485	0.30	-0.1
1,789,681	-		DZA65_RS08485	0.31	+1.3
1,789,681	-		DZA65_RS08485	0.31	+0.0
1,789,681	-		DZA65_RS08485	0.31	+0.1
1,789,681	-		DZA65_RS08485	0.31	-0.9
1,789,681	-				+0.5
1,789,681	-		DZA65_RS08485	0.31	+0.8
1,789,681	-		DZA65_RS08485	0.31	-1.2
1,789,681	-		DZA65_RS08485	0.31	-0.5
1,789,681	-		DZA65_RS08485	0.31	+0.9
1,789,681	-		DZA65_RS08485	0.31	-1.7
1,789,681	-		DZA65_RS08485	0.31	-1.2
1,789,682	+		DZA65_RS08485	0.31	+0.7
1,789,682	+		DZA65_RS08485	0.31	+0.3
1,789,682	+		DZA65_RS08485	0.31	+0.6
1,789,682	+		DZA65_RS08485	0.31	-1.1
1,789,682	+		DZA65_RS08485	0.31	+0.8
1,789,682	+		DZA65_RS08485	0.31	+0.1
1,789,682	+		DZA65_RS08485	0.31	+0.7
1,789,682	+		DZA65_RS08485	0.31	-1.4
1,789,682	+		DZA65_RS08485	0.31	+0.8
1,789,682	+		DZA65_RS08485	0.31	-0.7
1,789,683	-		DZA65_RS08485	0.31	-0.9
1,789,683	-		DZA65_RS08485	0.31	+1.1
1,789,683	-		DZA65_RS08485	0.31	+0.1
1,789,683	-		DZA65_RS08485	0.31	-1.2
1,789,721	+		DZA65_RS08485	0.37	-0.3
1,789,722	-		DZA65_RS08485	0.38	-2.6
1,789,722	-		DZA65_RS08485	0.38	-0.5
1,789,722	-		DZA65_RS08485	0.38	-0.6
1,789,762	+		DZA65_RS08485	0.44	-0.1
1,789,763	-		DZA65_RS08485	0.44	-1.9
1,789,763	-		DZA65_RS08485	0.44	-0.1
1,789,825	+		DZA65_RS08485	0.55	+0.7
1,789,825	+		DZA65_RS08485	0.55	-0.2
1,789,826	-		DZA65_RS08485	0.55	+0.1
1,789,826	-		DZA65_RS08485	0.55	-0.0
1,789,826	-		DZA65_RS08485	0.55	+0.1
1,790,075	+				-1.7
1,790,076	-				-0.8
1,790,104	+				+0.5
1,790,130	+				-2.1
1,790,130	+				+0.1
1,790,130	+				+0.3
1,790,130	+				+0.6
1,790,131	-				-0.9
1,790,131	-				-1.5
1,790,131	-				+0.1
1,790,142	+				+0.3
1,790,142	+				+0.9
1,790,142	+				+0.3
1,790,143	-				+0.6
1,790,143	-				+0.8
1,790,143	-				+0.2
1,790,143	-				+0.3
1,790,158	+				+0.1
1,790,194	-				+0.5
1,790,236	-				+0.8
1,790,237	+				+0.5
1,790,237	+				-0.6
1,790,238	-				-0.4
1,790,238	-				-0.2
1,790,238	-				-0.5
1,790,238	-				-0.9
1,790,238	-				+1.5
1,790,238	-				+0.5
1,790,244	+				-0.5
1,790,245	-				+0.7
1,790,270	+				-0.4
1,790,270	+				-0.1
1,790,310	+				-1.1
1,790,310	+				+0.1
1,790,310	+				-0.5
1,790,310	+				-0.8
1,790,310	+				+0.4
1,790,310	+				+0.3
1,790,310	+				+0.6
1,790,310	+				+0.3
1,790,311	-				-1.9
1,790,311	-				+0.4
1,790,311	-				+0.3
1,790,311	-				+0.1
1,790,411	+		DZA65_RS08490	0.33	-0.4
1,790,411	+		DZA65_RS08490	0.33	+0.1
1,790,411	+		DZA65_RS08490	0.33	+0.3
1,790,411	+		DZA65_RS08490	0.33	+0.2
1,790,412	-		DZA65_RS08490	0.34	+1.1
1,790,412	-		DZA65_RS08490	0.34	-0.4
1,790,455	+		DZA65_RS08490	0.47	-0.7
1,790,455	+		DZA65_RS08490	0.47	+0.1
1,790,456	-		DZA65_RS08490	0.48	+0.1
1,790,652	+				+0.8
1,790,667	+		DZA65_RS08495	0.13	+0.7
1,790,668	-		DZA65_RS08495	0.13	-0.1
1,790,668	-		DZA65_RS08495	0.13	+0.9
1,790,668	-		DZA65_RS08495	0.13	-0.1
1,790,668	-		DZA65_RS08495	0.13	+0.6
1,790,731	+		DZA65_RS08495	0.28	+1.3
1,790,732	-		DZA65_RS08495	0.28	+0.2
1,790,808	+		DZA65_RS08495	0.46	+0.1
1,790,808	+		DZA65_RS08495	0.46	-0.8
1,790,808	+		DZA65_RS08495	0.46	-0.6
1,790,808	+		DZA65_RS08495	0.46	+1.7
1,790,808	+		DZA65_RS08495	0.46	-1.9
1,790,808	+		DZA65_RS08495	0.46	+0.1
1,790,808	+		DZA65_RS08495	0.46	+0.7
1,790,808	+		DZA65_RS08495	0.46	+0.9
1,790,808	+		DZA65_RS08495	0.46	+0.2
1,790,808	+		DZA65_RS08495	0.46	+0.3
1,790,808	+		DZA65_RS08495	0.46	-0.5
1,790,808	+		DZA65_RS08495	0.46	+1.2
1,790,808	+		DZA65_RS08495	0.46	+0.8
1,790,809	-		DZA65_RS08495	0.46	+0.2
1,790,809	-		DZA65_RS08495	0.46	+0.1
1,790,809	-		DZA65_RS08495	0.46	-0.3
1,790,809	-		DZA65_RS08495	0.46	+0.4
1,790,809	-		DZA65_RS08495	0.46	-0.1
1,790,809	-		DZA65_RS08495	0.46	-1.2
1,790,809	-		DZA65_RS08495	0.46	-0.5
1,790,809	-		DZA65_RS08495	0.46	-0.5
1,790,833	-		DZA65_RS08495	0.52	+0.9
1,790,899	-		DZA65_RS08495	0.68	-1.5
1,790,967	+		DZA65_RS08495	0.84	+0.3
1,790,968	-		DZA65_RS08495	0.84	-0.9
1,790,974	+		DZA65_RS08495	0.85	+0.1
1,790,974	+		DZA65_RS08495	0.85	-0.1
1,790,974	+		DZA65_RS08495	0.85	+0.2
1,790,975	-		DZA65_RS08495	0.85	+0.6
1,790,975	-		DZA65_RS08495	0.85	+0.1
1,791,009	+				+0.9
1,791,010	-				+0.2
1,791,010	-				-0.0
1,791,012	+				+0.0
1,791,012	+				-0.4
1,791,023	+				-1.4
1,791,023	+				-0.7
1,791,023	+				-0.5
1,791,023	+				-1.9
1,791,023	+				+0.3
1,791,024	-				-0.9
1,791,024	-				-0.9
1,791,032	+				-0.7
1,791,033	-				-0.0
1,791,033	-				-0.9
1,791,034	+				+0.1
1,791,035	-				-0.5
1,791,044	-				-0.5
1,791,044	-				-0.2
1,791,066	+				+0.7
1,791,066	+				-0.6
1,791,066	+				+0.1
1,791,066	+				+0.7
1,791,066	+				-1.3
1,791,066	+				+0.2
1,791,067	-				+0.1
1,791,067	-				-1.7
1,791,067	-				-0.5
1,791,067	-				-1.3
1,791,067	-				+0.0
1,791,067	-				-0.3
1,791,069	+				+1.1
1,791,069	+				+0.0
1,791,069	+				-0.9
1,791,069	+				-0.7
1,791,069	+				-1.2
1,791,069	+				-0.0
1,791,069	+				+1.6
1,791,069	+				+0.6
1,791,069	+				-0.5
1,791,070	-				-0.8
1,791,070	-				-0.1
1,791,070	-				+0.1
1,791,070	-				-0.2
1,791,070	-				-0.5
1,791,070	-				+0.3
1,791,070	-				-0.3
1,791,070	-				-1.2
1,791,075	-				+0.4
1,791,090	+				-1.0
1,791,090	+				+1.1
1,791,090	+				-1.1
1,791,090	+				+0.1
1,791,090	+				+0.5
1,791,091	-				-0.5
1,791,091	-				-0.1
1,791,091	-				+0.1
1,791,106	+				-0.5
1,791,106	+				+0.4
1,791,106	+				+0.1
1,791,106	+				+0.0
1,791,107	-				+0.6
1,791,107	-				-0.2
1,791,107	-				+0.3
1,791,120	-				-0.9
1,791,147	-				-0.9
1,791,148	+				-0.6
1,791,148	+				+0.2
1,791,148	+				-1.4
1,791,148	+				-1.3
1,791,200	-				+2.1
1,791,200	-				+0.8
1,791,363	+				+0.3
1,791,433	+		DZA65_RS08500	0.13	+1.4
1,791,433	+		DZA65_RS08500	0.13	+1.1
1,791,515	+				+0.3
1,791,515	+		DZA65_RS08500	0.19	-0.1
1,791,515	+		DZA65_RS08500	0.19	-0.1
1,791,545	-		DZA65_RS08500	0.21	+0.5
1,791,545	-		DZA65_RS08500	0.21	-0.3
1,791,545	-		DZA65_RS08500	0.21	+0.1
1,791,622	+		DZA65_RS08500	0.27	-0.4
1,791,622	+		DZA65_RS08500	0.27	-0.3
1,791,622	+		DZA65_RS08500	0.27	-2.1
1,791,622	+		DZA65_RS08500	0.27	+0.5
1,791,622	+		DZA65_RS08500	0.27	-0.9
1,791,622	+		DZA65_RS08500	0.27	+1.2
1,791,622	+		DZA65_RS08500	0.27	-0.7
1,791,622	+		DZA65_RS08500	0.27	-1.6
1,791,623	-				+0.1
1,791,623	-		DZA65_RS08500	0.27	-0.4
1,791,623	-		DZA65_RS08500	0.27	-0.5
1,791,623	-		DZA65_RS08500	0.27	-0.2
1,791,623	-		DZA65_RS08500	0.27	+0.1
1,791,623	-		DZA65_RS08500	0.27	+1.3
1,791,623	-		DZA65_RS08500	0.27	-0.9
1,791,623	-		DZA65_RS08500	0.27	+1.5
1,791,623	-		DZA65_RS08500	0.27	+1.1
1,791,735	+		DZA65_RS08500	0.36	-0.3
1,791,736	-		DZA65_RS08500	0.36	+1.1
1,791,736	-		DZA65_RS08500	0.36	-1.2
1,791,736	-		DZA65_RS08500	0.36	+2.2
1,791,980	+		DZA65_RS08500	0.54	+0.1
1,791,980	+		DZA65_RS08500	0.54	-0.7
1,792,007	+		DZA65_RS08500	0.56	-1.2
1,792,008	-		DZA65_RS08500	0.56	-0.2