Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08365

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,762,981	+		DZA65_RS08360	0.16	+0.6
1,762,981	+		DZA65_RS08360	0.16	+1.2
1,762,982	-		DZA65_RS08360	0.16	-1.4
1,762,982	-		DZA65_RS08360	0.16	-0.5
1,763,063	-		DZA65_RS08360	0.25	+2.4
1,763,078	+		DZA65_RS08360	0.27	-0.1
1,763,078	+		DZA65_RS08360	0.27	-1.2
1,763,078	+		DZA65_RS08360	0.27	-0.4
1,763,078	+		DZA65_RS08360	0.27	+0.1
1,763,078	+		DZA65_RS08360	0.27	+1.4
1,763,078	+		DZA65_RS08360	0.27	-0.2
1,763,078	+		DZA65_RS08360	0.27	+0.4
1,763,079	-		DZA65_RS08360	0.27	-0.9
1,763,079	-		DZA65_RS08360	0.27	-0.5
1,763,079	-		DZA65_RS08360	0.27	+1.7
1,763,079	-		DZA65_RS08360	0.27	+1.1
1,763,079	-		DZA65_RS08360	0.27	-0.2
1,763,079	-		DZA65_RS08360	0.27	-0.6
1,763,079	-		DZA65_RS08360	0.27	-1.0
1,763,079	-		DZA65_RS08360	0.27	+0.4
1,763,079	-		DZA65_RS08360	0.27	+0.3
1,763,162	+		DZA65_RS08360	0.36	-0.5
1,763,162	+		DZA65_RS08360	0.36	-0.3
1,763,163	-		DZA65_RS08360	0.36	-0.0
1,763,282	-		DZA65_RS08360	0.49	-0.7
1,763,345	-		DZA65_RS08360	0.55	+0.4
1,763,345	-				-0.5
1,763,381	+		DZA65_RS08360	0.59	-0.5
1,763,382	-		DZA65_RS08360	0.59	-0.0
1,763,382	-		DZA65_RS08360	0.59	+0.6
1,763,382	-		DZA65_RS08360	0.59	-0.5
1,763,541	+		DZA65_RS08360	0.77	-1.9
1,763,541	+		DZA65_RS08360	0.77	-0.9
1,763,541	+		DZA65_RS08360	0.77	-0.2
1,763,541	+		DZA65_RS08360	0.77	-0.3
1,763,542	-		DZA65_RS08360	0.77	+0.1
1,763,542	-		DZA65_RS08360	0.77	+0.3
1,763,743	+				-0.8
1,763,743	+				-1.2
1,763,743	+				-0.2
1,763,743	+				+0.7
1,763,743	+				-0.0
1,763,744	-				-0.2
1,763,744	-				-0.9
1,763,836	+				-0.7
1,763,837	-				-0.8
1,763,847	-				-1.0
1,763,889	+				+0.1
1,763,890	-				+0.4
1,763,890	-				+0.5
1,763,890	-				+0.7
1,763,890	-				-0.6
1,763,890	-				-0.0
1,763,890	-				-1.2
1,763,901	+				-0.5
1,763,901	+				-0.2
1,763,902	-				-0.1
1,763,902	-				+0.1
1,763,902	-				+0.4
1,763,902	-				+0.3
1,763,902	-				-0.5
1,763,926	+				+0.1
1,763,927	-				+0.1
1,763,978	+				-0.6
1,763,978	+				-0.8
1,763,979	-				+1.1
1,763,979	-				-0.1
1,764,107	+		DZA65_RS08365	0.17	-0.3
1,764,108	-				+1.9
1,764,140	+		DZA65_RS08365	0.21	+0.5
1,764,140	+		DZA65_RS08365	0.21	-0.2
1,764,140	+		DZA65_RS08365	0.21	-0.3
1,764,140	+		DZA65_RS08365	0.21	-0.1
1,764,140	+		DZA65_RS08365	0.21	+0.0
1,764,140	+		DZA65_RS08365	0.21	-0.5
1,764,141	-		DZA65_RS08365	0.21	+0.3
1,764,141	-		DZA65_RS08365	0.21	+0.4
1,764,141	-		DZA65_RS08365	0.21	-0.0
1,764,141	-		DZA65_RS08365	0.21	-0.6
1,764,141	-		DZA65_RS08365	0.21	+0.3
1,764,141	-		DZA65_RS08365	0.21	-0.1
1,764,206	+		DZA65_RS08365	0.30	+0.7
1,764,206	+		DZA65_RS08365	0.30	-0.1
1,764,206	+		DZA65_RS08365	0.30	-0.1
1,764,207	-		DZA65_RS08365	0.30	-1.1
1,764,207	-		DZA65_RS08365	0.30	-0.6
1,764,207	-		DZA65_RS08365	0.30	-1.1
1,764,207	-		DZA65_RS08365	0.30	-0.3
1,764,207	-		DZA65_RS08365	0.30	+0.7
1,764,285	-		DZA65_RS08365	0.40	+0.3
1,764,285	-		DZA65_RS08365	0.40	+0.2
1,764,309	+		DZA65_RS08365	0.43	+1.1
1,764,309	+		DZA65_RS08365	0.43	-0.1
1,764,309	+		DZA65_RS08365	0.43	-0.5
1,764,309	+		DZA65_RS08365	0.43	-0.2
1,764,309	+		DZA65_RS08365	0.43	-2.7
1,764,309	+		DZA65_RS08365	0.43	+0.1
1,764,309	+		DZA65_RS08365	0.43	+1.9
1,764,309	+		DZA65_RS08365	0.43	+0.5
1,764,309	+		DZA65_RS08365	0.43	+0.5
1,764,309	+		DZA65_RS08365	0.43	+0.2
1,764,310	-		DZA65_RS08365	0.44	+0.7
1,764,310	-		DZA65_RS08365	0.44	-0.2
1,764,310	-		DZA65_RS08365	0.44	+0.2
1,764,310	-		DZA65_RS08365	0.44	+0.6
1,764,437	+		DZA65_RS08365	0.60	+0.8
1,764,437	+		DZA65_RS08365	0.60	+1.7
1,764,438	-		DZA65_RS08365	0.60	-0.4
1,764,438	-		DZA65_RS08365	0.60	+0.9
1,764,545	+		DZA65_RS08365	0.74	-0.1
1,764,545	+		DZA65_RS08365	0.74	+0.1
1,764,545	+		DZA65_RS08365	0.74	-0.2
1,764,545	+		DZA65_RS08365	0.74	-0.3
1,764,545	+		DZA65_RS08365	0.74	-1.1
1,764,545	+		DZA65_RS08365	0.74	-3.0
1,764,546	-		DZA65_RS08365	0.74	-2.1
1,764,546	-		DZA65_RS08365	0.74	-1.7
1,764,546	-		DZA65_RS08365	0.74	+0.8
1,764,546	-		DZA65_RS08365	0.74	+0.5
1,764,546	-		DZA65_RS08365	0.74	+0.4
1,764,546	-		DZA65_RS08365	0.74	+0.1
1,764,546	-		DZA65_RS08365	0.74	-0.8
1,764,673	+				+0.5
1,764,673	+				-0.9
1,764,673	+				-0.1
1,764,673	+				-0.0
1,764,673	+				+0.5
1,764,673	+				+0.1
1,764,674	-				+0.8
1,764,674	-				-0.7
1,764,674	-				+0.5
1,764,674	-				-1.0
1,764,674	-				-0.6
1,764,674	-				+1.1
1,764,674	-				+0.1
1,764,674	-				+0.2
1,764,674	-				+0.6
1,764,674	-				-0.3
1,764,677	+				+0.5
1,764,677	+				-0.3
1,764,677	+				-0.3
1,764,677	+				-0.4
1,764,677	+				+0.1
1,764,677	+				-0.9
1,764,677	+				+0.7
1,764,678	-				-0.2
1,764,678	-				-0.0
1,764,678	-				-2.7
1,764,705	+				-0.1
1,764,705	+				+0.5
1,764,725	+				+0.1
1,764,725	+				-0.0
1,764,726	-				-1.7
1,764,726	-				+0.8
1,764,726	-				-0.2
1,764,726	-				-0.2
1,764,726	-				-0.6
1,764,726	-				+0.2
1,764,736	+				-1.1
1,764,736	+				-0.5
1,764,737	-				-1.4
1,764,804	+				-0.3
1,764,804	+				-1.2
1,764,805	-				-1.9
1,764,805	-				+0.5
1,764,873	+				+0.8
1,764,873	+				+0.6
1,764,873	+				+0.1
1,764,873	+				-0.7
1,764,873	+				-0.3
1,764,874	-				+0.7
1,764,874	-				+0.2
1,764,874	-				+0.5
1,764,879	+				-1.3
1,764,889	+				-1.9
1,764,895	+				+0.1
1,764,895	+				+0.1
1,764,911	+				-1.2
1,764,912	-				+0.1
1,764,920	+				-1.1
1,764,920	+				+0.8
1,764,920	+				+0.7
1,764,920	+				+1.3
1,764,920	+				-1.5
1,764,920	+				+0.4
1,764,920	+				+0.8
1,764,920	+				-1.7
1,764,920	+				-1.4
1,764,921	-				+0.2
1,764,921	-				-0.0
1,764,921	-				-0.8
1,764,921	-				-0.6
1,764,921	-				-0.2
1,764,921	-				-0.2
1,764,933	-				+0.1
1,764,933	-				+0.8
1,764,952	+				-0.0
1,764,963	+				-0.8
1,764,963	+				-0.4
1,764,963	+				+1.5
1,764,964	-				-0.1
1,765,057	+				-2.4
1,765,057	+				-1.8
1,765,111	-		DZA65_RS08370	0.11	+1.1
1,765,174	+		DZA65_RS08370	0.18	-0.2
1,765,280	-		DZA65_RS08370	0.30	+0.8
1,765,280	-		DZA65_RS08370	0.30	-0.1
1,765,531	+		DZA65_RS08370	0.58	-0.4
1,765,531	+		DZA65_RS08370	0.58	-0.1
1,765,532	-		DZA65_RS08370	0.58	-0.1
1,765,532	-		DZA65_RS08370	0.58	-0.4
1,765,686	+		DZA65_RS08370	0.75	-1.7
1,765,687	-		DZA65_RS08370	0.75	+1.1
1,765,714	+		DZA65_RS08370	0.78	-1.0
1,765,714	+		DZA65_RS08370	0.78	-1.1
1,765,715	-		DZA65_RS08370	0.78	+0.9
1,765,715	-		DZA65_RS08370	0.78	+0.4
1,765,715	-		DZA65_RS08370	0.78	-0.1
1,765,715	-		DZA65_RS08370	0.78	-0.2