Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07865

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,640,187	+		DZA65_RS07860	0.19	-0.5
1,640,187	+		DZA65_RS07860	0.19	+0.3
1,640,187	+		DZA65_RS07860	0.19	+1.5
1,640,187	+		DZA65_RS07860	0.19	+0.3
1,640,188	-		DZA65_RS07860	0.19	-0.3
1,640,387	-		DZA65_RS07860	0.51	+1.0
1,640,626	+		DZA65_RS07860	0.89	-0.1
1,640,626	+		DZA65_RS07860	0.89	+0.0
1,640,626	+		DZA65_RS07860	0.89	-0.6
1,640,627	-		DZA65_RS07860	0.89	-1.1
1,640,656	+				+0.1
1,640,693	-				-0.1
1,640,713	+				-1.2
1,640,713	+				+0.7
1,640,713	+				-1.2
1,640,739	+				-0.2
1,640,740	-				-0.3
1,640,740	-				+1.1
1,640,740	-				-0.5
1,640,740	-				+0.5
1,640,843	+				+1.3
1,640,844	-				-0.4
1,640,866	+				-0.7
1,640,867	-				+0.7
1,640,871	-				-0.0
1,640,991	+				-0.0
1,640,993	+				+0.5
1,641,009	-				+0.4
1,641,056	+				+0.8
1,641,102	+				+0.3
1,641,102	+				+0.3
1,641,102	+				-0.6
1,641,102	+				-1.0
1,641,102	+				-0.1
1,641,102	+				-0.1
1,641,102	+				+0.1
1,641,102	+				-0.9
1,641,102	+				-0.5
1,641,102	+				-0.1
1,641,102	+				-0.4
1,641,102	+				+0.1
1,641,102	+				-0.7
1,641,102	+				+1.0
1,641,102	+				+0.8
1,641,102	+				-0.6
1,641,103	-				-1.5
1,641,103	-				-0.7
1,641,103	-				-0.7
1,641,103	-				-0.3
1,641,103	-				+0.3
1,641,103	-				-3.7
1,641,103	-				-0.1
1,641,103	-				+0.8
1,641,103	-				-0.3
1,641,103	-				-1.3
1,641,103	-				-0.3
1,641,103	-				-0.4
1,641,257	+		DZA65_RS07865	0.56	-1.6
1,641,257	+		DZA65_RS07865	0.56	-1.0
1,641,257	+		DZA65_RS07865	0.56	-1.2
1,641,257	+		DZA65_RS07865	0.56	-0.9
1,641,258	-		DZA65_RS07865	0.56	-0.1
1,641,258	-		DZA65_RS07865	0.56	+0.9
1,641,258	-		DZA65_RS07865	0.56	+0.0
1,641,366	+				+0.7
1,641,367	-				+0.7
1,641,367	-				-0.5
1,641,367	-				+0.0
1,641,406	+				+1.3
1,641,407	-				+0.2
1,641,407	-				+0.5
1,641,409	-				+1.1
1,641,457	-				+0.8
1,641,481	+				-0.5
1,641,481	+				+0.2
1,641,482	-				+0.8
1,641,482	-				-0.9
1,641,581	+				+0.6
1,641,581	+				-0.7
1,641,581	+				+1.1
1,641,581	+				+0.4
1,641,582	-				-0.5
1,641,582	-				-0.6
1,641,582	-				-2.6
1,641,582	-				+0.5
1,641,582	-				-1.6
1,641,583	+				-0.3
1,641,583	+				+0.0
1,641,583	+				-1.5
1,641,583	+				-0.7
1,641,583	+				+0.2
1,641,583	+				-0.2
1,641,583	+				+0.4
1,641,583	+				+0.1
1,641,583	+				-0.1
1,641,583	+				-0.0
1,641,583	+				+0.4
1,641,583	+				-0.5
1,641,583	+				+1.3
1,641,583	+				-1.2
1,641,583	+				+0.3
1,641,583	+				-0.6
1,641,584	-				-1.9
1,641,584	-				+2.7
1,641,584	-				-0.1
1,641,584	-				-0.6
1,641,584	-				-0.4
1,641,584	-				-0.0
1,641,584	-				-0.3
1,641,584	-				+0.7
1,641,584	-				-1.0
1,641,584	-				+1.4
1,641,584	-				+0.9
1,641,599	+				-0.3
1,641,599	+				-2.2
1,641,600	-				-0.9
1,641,602	-				-0.2
1,641,602	-				-0.5
1,641,602	-				+1.3
1,641,602	-				-1.3
1,641,602	-				-0.5
1,641,698	-				-0.2
1,641,704	-				+2.7
1,641,704	-				-0.2
1,641,704	-				-0.1
1,641,710	+				-0.5
1,641,710	+				-1.3
1,641,711	-				+0.2
1,641,711	-				-0.3
1,641,711	-				-0.9
1,641,711	-				+1.1
1,641,716	+				-1.1
1,641,723	-				-0.4
1,641,800	+				-0.6
1,641,800	+				+1.9
1,641,800	+				+1.1
1,641,800	+				-2.2
1,641,800	+				+1.1
1,641,801	-				-1.0
1,641,801	-				+0.1
1,641,801	-				+0.2
1,641,801	-				-0.1
1,641,801	-				-0.5
1,641,801	-				-0.7
1,641,801	-				+0.8
1,641,801	-				-0.6
1,641,801	-				+0.8
1,641,801	-				-1.5
1,641,801	-				+0.4
1,641,801	-				-0.8
1,641,801	-				-0.6
1,641,801	-				+0.1
1,641,801	-				-1.6
1,641,802	+				+0.2
1,641,803	-				-0.3
1,641,803	-				-1.1
1,641,803	-				+1.3
1,641,824	-				-0.6
1,641,850	-		DZA65_RS07870	0.10	-0.1
1,641,850	-		DZA65_RS07870	0.10	-0.1
1,641,850	-		DZA65_RS07870	0.10	-0.5
1,641,967	+		DZA65_RS07870	0.23	-2.2
1,641,968	-		DZA65_RS07870	0.23	-0.9
1,641,968	-		DZA65_RS07870	0.23	-0.3
1,641,988	+		DZA65_RS07870	0.25	+0.1
1,642,055	-		DZA65_RS07870	0.32	-1.2
1,642,068	-		DZA65_RS07870	0.33	+0.6
1,642,068	-		DZA65_RS07870	0.33	+0.6
1,642,238	+		DZA65_RS07870	0.51	-0.6
1,642,238	+		DZA65_RS07870	0.51	+0.1
1,642,239	-		DZA65_RS07870	0.51	-1.5
1,642,242	-		DZA65_RS07870	0.51	+1.4
1,642,242	-		DZA65_RS07870	0.51	-0.2
1,642,242	-		DZA65_RS07870	0.51	-0.3
1,642,336	+		DZA65_RS07870	0.61	-0.9
1,642,336	+		DZA65_RS07870	0.61	+0.9
1,642,336	+		DZA65_RS07870	0.61	-0.0
1,642,336	+		DZA65_RS07870	0.61	-1.1
1,642,337	-		DZA65_RS07870	0.61	+0.3
1,642,337	-		DZA65_RS07870	0.61	-0.5
1,642,337	-		DZA65_RS07870	0.61	+0.3
1,642,337	-		DZA65_RS07870	0.61	-0.9
1,642,337	-		DZA65_RS07870	0.61	-0.9