Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06885

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,430,697	+				-1.3
1,430,697	+				-0.6
1,430,697	+				-0.1
1,430,697	+				-1.4
1,430,701	+				-1.6
1,430,701	+				-1.4
1,430,820	+		DZA65_RS06880	0.89	-0.6
1,430,841	-				-0.2
1,430,867	+		DZA65_RS06885	0.13	-1.6
1,430,923	+		DZA65_RS06885	0.32	-0.6
1,430,923	+		DZA65_RS06885	0.32	-0.5
1,430,924	-		DZA65_RS06885	0.32	+0.1
1,430,924	-		DZA65_RS06885	0.32	-1.3
1,430,924	-		DZA65_RS06885	0.32	-0.7
1,431,044	+		DZA65_RS06885	0.73	-0.4
1,431,044	+		DZA65_RS06885	0.73	-0.1
1,431,105	+				-0.5
1,431,105	+				-0.2
1,431,106	-				-0.1
1,431,106	-				-0.2
1,431,109	-				-0.2
1,431,109	-				-1.4
1,431,111	+				-0.8
1,431,111	+				+0.6
1,431,111	+				+2.4
1,431,112	-				+0.3
1,431,112	-				+0.0
1,431,112	-				+1.5
1,431,112	-				-1.2
1,431,112	-				+0.2
1,431,112	-				+0.4
1,431,120	+				-2.4
1,431,121	-				-0.8
1,431,126	-				-0.3
1,431,126	-				-0.2
1,431,126	-				+0.1
1,431,166	+				+0.5
1,431,170	+				+0.3
1,431,170	+				+0.7
1,431,171	-				-0.6
1,431,171	-				+0.2
1,431,171	-				+0.8
1,431,174	+				+0.6
1,431,175	-				+0.8
1,431,175	-				-0.9
1,431,184	+				+0.0
1,431,184	+				-0.7
1,431,185	-				-2.0
1,431,185	-				-0.9
1,431,185	-				-2.2
1,431,188	+				-0.1
1,431,188	+				+0.4
1,431,188	+				+0.1
1,431,188	+				-0.6
1,431,188	+				-2.3
1,431,189	-				-0.7
1,431,189	-				-0.9
1,431,189	-				-0.5
1,431,189	-				-0.5
1,431,189	-				-0.8
1,431,189	-				-2.1
1,431,220	+				-0.5
1,431,220	+				-0.3
1,431,220	+				-0.2
1,431,221	-				-0.2
1,431,221	-				-1.0
1,431,221	-				+3.2
1,431,222	+				-0.8
1,431,222	+				+0.7
1,431,222	+				+0.1
1,431,222	+				+0.3
1,431,222	+				+1.4
1,431,223	-				-1.4
1,431,223	-				+1.6
1,431,223	-				+1.4
1,431,223	-				-0.1
1,431,223	-				-1.8
1,431,253	+				+1.4
1,431,253	+				-0.9
1,431,253	+				-0.6
1,431,253	+				-0.2
1,431,253	+				+0.2
1,431,254	-				-1.4
1,431,254	-				-0.2
1,431,265	+				-0.4
1,431,265	+				-0.8
1,431,265	+				-0.8
1,431,265	+				-1.2
1,431,265	+				+1.7
1,431,266	-				-0.5
1,431,293	+				+1.0
1,431,293	+				-0.1
1,431,296	+				-0.4
1,431,296	+				-1.1
1,431,296	+				+0.1
1,431,296	+				-0.2
1,431,296	+				-2.0
1,431,297	-				+0.2
1,431,304	+		DZA65_RS06890	0.12	-1.8
1,431,319	+		DZA65_RS06890	0.15	-1.2
1,431,338	+		DZA65_RS06890	0.20	-0.3
1,431,338	+		DZA65_RS06890	0.20	-1.0
1,431,350	+		DZA65_RS06890	0.23	-0.2
1,431,350	+		DZA65_RS06890	0.23	-0.8
1,431,350	+		DZA65_RS06890	0.23	+0.3
1,431,383	+		DZA65_RS06890	0.31	-0.7
1,431,383	+		DZA65_RS06890	0.31	-1.4
1,431,383	+		DZA65_RS06890	0.31	+0.0
1,431,383	+		DZA65_RS06890	0.31	-0.0
1,431,383	+		DZA65_RS06890	0.31	-0.2
1,431,384	-		DZA65_RS06890	0.31	-1.2
1,431,436	+		DZA65_RS06890	0.44	+0.2
1,431,452	+		DZA65_RS06890	0.48	-1.3
1,431,480	+		DZA65_RS06890	0.55	-0.9
1,431,507	+		DZA65_RS06890	0.62	-2.4
1,431,507	+		DZA65_RS06890	0.62	-1.6
1,431,507	+		DZA65_RS06890	0.62	-0.5
1,431,567	+		DZA65_RS06890	0.77	-0.4
1,431,567	+		DZA65_RS06890	0.77	+0.6
1,431,567	+		DZA65_RS06890	0.77	+0.2
1,431,567	+		DZA65_RS06890	0.77	-0.4
1,431,585	+		DZA65_RS06890	0.81	+0.1
1,431,631	+				-0.6
1,431,631	+				-0.9
1,431,631	+				+0.2
1,431,637	+				-0.4
1,431,637	+				+0.1
1,431,637	+				-1.2
1,431,637	+				+0.5
1,431,637	+				-0.6
1,431,672	+				-1.3
1,432,072	+		DZA65_RS06895	0.60	-1.4
1,432,072	+		DZA65_RS06895	0.60	+0.5
1,432,072	+		DZA65_RS06895	0.60	-0.6
1,432,073	-		DZA65_RS06895	0.60	-1.2
1,432,094	+		DZA65_RS06895	0.63	-1.1
1,432,094	+		DZA65_RS06895	0.63	-1.2
1,432,104	+		DZA65_RS06895	0.65	-0.4
1,432,104	+		DZA65_RS06895	0.65	-1.2
1,432,104	+		DZA65_RS06895	0.65	+0.2
1,432,104	+		DZA65_RS06895	0.65	-0.6
1,432,104	+		DZA65_RS06895	0.65	-1.2
1,432,104	+		DZA65_RS06895	0.65	+0.9
1,432,104	+		DZA65_RS06895	0.65	+0.4
1,432,104	+		DZA65_RS06895	0.65	-0.2