Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06700

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,387,664	+		DZA65_RS06695	0.16	+0.4
1,387,664	+		DZA65_RS06695	0.16	+0.6
1,387,664	+		DZA65_RS06695	0.16	+0.2
1,387,664	+		DZA65_RS06695	0.16	-0.1
1,387,665	-		DZA65_RS06695	0.16	-0.2
1,387,665	-		DZA65_RS06695	0.16	-1.4
1,387,665	-		DZA65_RS06695	0.16	-0.4
1,387,665	-		DZA65_RS06695	0.16	-0.4
1,387,746	+		DZA65_RS06695	0.24	+0.1
1,387,747	-		DZA65_RS06695	0.24	-0.9
1,387,749	+		DZA65_RS06695	0.24	-0.6
1,387,749	+		DZA65_RS06695	0.24	-0.0
1,387,749	+		DZA65_RS06695	0.24	-0.2
1,387,749	+		DZA65_RS06695	0.24	-0.9
1,387,749	+		DZA65_RS06695	0.24	+0.8
1,387,749	+		DZA65_RS06695	0.24	+0.7
1,387,749	+		DZA65_RS06695	0.24	-0.8
1,387,749	+		DZA65_RS06695	0.24	-2.0
1,387,749	+		DZA65_RS06695	0.24	+0.7
1,387,749	+		DZA65_RS06695	0.24	-0.2
1,387,749	+		DZA65_RS06695	0.24	-0.2
1,387,750	-		DZA65_RS06695	0.24	-0.2
1,387,750	-		DZA65_RS06695	0.24	-0.5
1,387,750	-				+2.0
1,387,750	-		DZA65_RS06695	0.24	+1.8
1,387,750	-		DZA65_RS06695	0.24	-2.1
1,387,750	-		DZA65_RS06695	0.24	-1.4
1,387,750	-		DZA65_RS06695	0.24	-0.3
1,387,750	-		DZA65_RS06695	0.24	-0.4
1,387,750	-		DZA65_RS06695	0.24	-0.6
1,387,750	-		DZA65_RS06695	0.24	-1.4
1,387,750	-		DZA65_RS06695	0.24	-0.1
1,387,750	-		DZA65_RS06695	0.24	-1.1
1,387,750	-		DZA65_RS06695	0.24	-0.4
1,387,750	-		DZA65_RS06695	0.24	-0.5
1,387,750	-		DZA65_RS06695	0.24	+0.4
1,387,751	+		DZA65_RS06695	0.24	-1.1
1,387,751	+		DZA65_RS06695	0.24	+0.2
1,387,751	+		DZA65_RS06695	0.24	-0.1
1,387,751	+		DZA65_RS06695	0.24	-1.4
1,387,751	+		DZA65_RS06695	0.24	-1.4
1,387,751	+		DZA65_RS06695	0.24	-1.1
1,387,752	-		DZA65_RS06695	0.24	-0.8
1,387,752	-		DZA65_RS06695	0.24	+0.7
1,387,752	-		DZA65_RS06695	0.24	+0.4
1,387,902	+		DZA65_RS06695	0.37	+0.2
1,387,902	+		DZA65_RS06695	0.37	+1.0
1,387,902	+		DZA65_RS06695	0.37	-0.8
1,387,902	+		DZA65_RS06695	0.37	-0.6
1,387,902	+		DZA65_RS06695	0.37	+0.1
1,387,903	-		DZA65_RS06695	0.37	-0.8
1,387,920	+		DZA65_RS06695	0.39	-0.1
1,387,920	+		DZA65_RS06695	0.39	+0.7
1,387,920	+		DZA65_RS06695	0.39	-2.8
1,387,920	+		DZA65_RS06695	0.39	-0.2
1,387,920	+		DZA65_RS06695	0.39	+0.3
1,387,920	+		DZA65_RS06695	0.39	-1.2
1,387,920	+		DZA65_RS06695	0.39	-0.5
1,387,920	+		DZA65_RS06695	0.39	-0.3
1,387,920	+		DZA65_RS06695	0.39	+0.6
1,387,920	+		DZA65_RS06695	0.39	+0.5
1,387,920	+		DZA65_RS06695	0.39	-0.4
1,387,921	-		DZA65_RS06695	0.39	-0.8
1,387,921	-		DZA65_RS06695	0.39	+0.6
1,387,921	-		DZA65_RS06695	0.39	-0.0
1,387,921	-		DZA65_RS06695	0.39	+0.1
1,387,921	-		DZA65_RS06695	0.39	+0.7
1,387,921	-		DZA65_RS06695	0.39	-0.9
1,387,921	-		DZA65_RS06695	0.39	+1.7
1,387,921	-		DZA65_RS06695	0.39	-0.1
1,387,921	-		DZA65_RS06695	0.39	+0.2
1,387,921	-		DZA65_RS06695	0.39	+0.1
1,387,921	-		DZA65_RS06695	0.39	-1.0
1,387,921	-		DZA65_RS06695	0.39	+1.2
1,387,921	-		DZA65_RS06695	0.39	-0.3
1,388,132	+		DZA65_RS06695	0.57	-0.3
1,388,132	+		DZA65_RS06695	0.57	+0.9
1,388,132	+		DZA65_RS06695	0.57	-0.1
1,388,132	+		DZA65_RS06695	0.57	-1.4
1,388,132	+		DZA65_RS06695	0.57	+0.5
1,388,132	+		DZA65_RS06695	0.57	-1.3
1,388,132	+		DZA65_RS06695	0.57	-0.3
1,388,132	+		DZA65_RS06695	0.57	-0.3
1,388,132	+		DZA65_RS06695	0.57	-0.1
1,388,133	-		DZA65_RS06695	0.57	-0.1
1,388,133	-		DZA65_RS06695	0.57	+1.5
1,388,133	-		DZA65_RS06695	0.57	-0.5
1,388,133	-		DZA65_RS06695	0.57	-1.3
1,388,133	-		DZA65_RS06695	0.57	-1.0
1,388,133	-		DZA65_RS06695	0.57	-0.0
1,388,133	-		DZA65_RS06695	0.57	-0.1
1,388,133	-		DZA65_RS06695	0.57	-0.9
1,388,133	-		DZA65_RS06695	0.57	-0.2
1,388,133	-		DZA65_RS06695	0.57	-1.1
1,388,154	+		DZA65_RS06695	0.59	-0.5
1,388,154	+		DZA65_RS06695	0.59	+1.2
1,388,154	+		DZA65_RS06695	0.59	-0.9
1,388,154	+		DZA65_RS06695	0.59	-1.4
1,388,154	+		DZA65_RS06695	0.59	-1.8
1,388,154	+				+0.2
1,388,154	+		DZA65_RS06695	0.59	-0.3
1,388,154	+		DZA65_RS06695	0.59	-1.0
1,388,154	+		DZA65_RS06695	0.59	+0.1
1,388,155	-		DZA65_RS06695	0.59	-0.1
1,388,155	-		DZA65_RS06695	0.59	-0.8
1,388,155	-		DZA65_RS06695	0.59	-0.2
1,388,155	-		DZA65_RS06695	0.59	+0.5
1,388,155	-		DZA65_RS06695	0.59	-0.7
1,388,155	-		DZA65_RS06695	0.59	+0.2
1,388,331	-		DZA65_RS06695	0.74	-1.6
1,388,331	-		DZA65_RS06695	0.74	-0.3
1,388,350	+		DZA65_RS06695	0.76	+1.4
1,388,350	+		DZA65_RS06695	0.76	-0.3
1,388,350	+		DZA65_RS06695	0.76	+0.7
1,388,351	-		DZA65_RS06695	0.76	+1.2
1,388,351	-		DZA65_RS06695	0.76	-0.8
1,388,351	-		DZA65_RS06695	0.76	-0.4
1,388,351	-		DZA65_RS06695	0.76	-0.3
1,388,461	+		DZA65_RS06695	0.86	-0.2
1,388,477	+				-1.1
1,388,478	-		DZA65_RS06695	0.87	+0.5
1,388,504	+		DZA65_RS06695	0.89	-0.3
1,388,622	+				-1.0
1,388,622	+				+2.2
1,388,622	+				+2.0
1,388,622	+				-0.1
1,388,622	+				+0.2
1,388,622	+				-1.5
1,388,622	+				-0.2
1,388,622	+				+0.9
1,388,622	+				+0.3
1,388,622	+				+0.5
1,388,622	+				-0.0
1,388,622	+				+1.2
1,388,622	+				+1.8
1,388,622	+				+1.2
1,388,623	-				-0.2
1,388,623	-				+0.4
1,388,623	-				-0.0
1,388,623	-				-0.5
1,388,623	-				+0.4
1,388,623	-				-0.4
1,388,623	-				-0.1
1,388,623	-				+0.4
1,388,623	-				-0.3
1,388,623	-				-1.2
1,388,623	-				+0.5
1,388,623	-				-0.5
1,388,623	-				-1.7
1,388,623	-				-0.0
1,388,623	-				+0.8
1,388,628	+				-0.3
1,388,628	+				-1.4
1,388,628	+				-0.7
1,388,628	+				+0.4
1,388,628	+				-1.0
1,388,628	+				+1.0
1,388,628	+				-0.9
1,388,628	+				+0.3
1,388,628	+				+0.6
1,388,628	+				+0.6
1,388,628	+				-1.0
1,388,628	+				-0.7
1,388,628	+				+0.5
1,388,628	+				+0.9
1,388,628	+				+0.0
1,388,629	-				+0.1
1,388,629	-				-0.6
1,388,629	-				-0.4
1,388,629	-				+0.3
1,388,629	-				-0.1
1,388,629	-				-0.2
1,388,629	-				+0.3
1,388,629	-				-0.3
1,388,629	-				-0.8
1,388,629	-				-0.1
1,388,629	-				-0.4
1,388,629	-				-0.7
1,388,629	-				+0.1
1,388,629	-				-0.2
1,388,630	+				-1.2
1,388,630	+				-0.9
1,388,630	+				+0.1
1,388,630	+				-0.3
1,388,630	+				-0.6
1,388,631	-				-0.8
1,388,631	-				-1.2
1,388,631	-				-0.3
1,388,631	-				+0.4
1,388,689	+				-0.1
1,388,689	+				-0.2
1,388,876	+		DZA65_RS06700	0.28	+0.3
1,388,877	-		DZA65_RS06700	0.28	+0.2
1,388,899	+		DZA65_RS06700	0.31	-1.5
1,388,899	+		DZA65_RS06700	0.31	-1.0
1,388,899	+		DZA65_RS06700	0.31	+1.2
1,388,900	-		DZA65_RS06700	0.31	-0.3
1,388,900	-		DZA65_RS06700	0.31	+0.2
1,388,900	-		DZA65_RS06700	0.31	-0.7
1,388,900	-		DZA65_RS06700	0.31	+0.5
1,388,903	+		DZA65_RS06700	0.32	-0.8
1,388,903	+		DZA65_RS06700	0.32	-0.1
1,388,903	+		DZA65_RS06700	0.32	+1.9
1,388,904	-		DZA65_RS06700	0.32	-1.1
1,388,904	-		DZA65_RS06700	0.32	+0.4
1,388,904	-		DZA65_RS06700	0.32	+0.3
1,388,975	+		DZA65_RS06700	0.41	-0.2
1,388,975	+		DZA65_RS06700	0.41	+0.5
1,388,975	+		DZA65_RS06700	0.41	-0.6
1,388,975	+		DZA65_RS06700	0.41	-0.8
1,388,975	+		DZA65_RS06700	0.41	+0.4
1,388,976	-		DZA65_RS06700	0.41	-0.5
1,388,976	-		DZA65_RS06700	0.41	+0.3
1,388,976	-		DZA65_RS06700	0.41	-0.3
1,389,011	+		DZA65_RS06700	0.45	+0.3
1,389,089	-		DZA65_RS06700	0.55	-0.8
1,389,110	+		DZA65_RS06700	0.58	-0.4
1,389,111	-		DZA65_RS06700	0.58	-0.4
1,389,137	+		DZA65_RS06700	0.61	-0.4
1,389,138	-		DZA65_RS06700	0.61	-2.0
1,389,155	+		DZA65_RS06700	0.63	+0.1
1,389,182	-		DZA65_RS06700	0.67	-0.7
1,389,197	-		DZA65_RS06700	0.68	-0.5
1,389,229	+		DZA65_RS06700	0.72	-2.6
1,389,229	+		DZA65_RS06700	0.72	-1.4
1,389,229	+		DZA65_RS06700	0.72	-1.5
1,389,229	+		DZA65_RS06700	0.72	+0.5
1,389,230	-		DZA65_RS06700	0.73	+0.7
1,389,230	-		DZA65_RS06700	0.73	+1.2
1,389,230	-		DZA65_RS06700	0.73	+0.2
1,389,230	-		DZA65_RS06700	0.73	-1.0
1,389,230	-		DZA65_RS06700	0.73	-2.0
1,389,239	+		DZA65_RS06700	0.74	-0.8
1,389,239	+		DZA65_RS06700	0.74	-0.0
1,389,239	+		DZA65_RS06700	0.74	+0.7
1,389,239	+		DZA65_RS06700	0.74	-0.4
1,389,239	+		DZA65_RS06700	0.74	+0.3
1,389,240	-		DZA65_RS06700	0.74	-1.1
1,389,242	+		DZA65_RS06700	0.74	+0.4
1,389,242	+		DZA65_RS06700	0.74	-0.3
1,389,242	+		DZA65_RS06700	0.74	+0.2
1,389,242	+		DZA65_RS06700	0.74	+2.0
1,389,243	-		DZA65_RS06700	0.74	+0.0
1,389,283	+		DZA65_RS06700	0.79	-2.8
1,389,283	+		DZA65_RS06700	0.79	-0.0
1,389,283	+		DZA65_RS06700	0.79	-0.4
1,389,284	-		DZA65_RS06700	0.79	-0.6
1,389,304	+		DZA65_RS06700	0.82	-1.2
1,389,304	+		DZA65_RS06700	0.82	-0.4
1,389,304	+		DZA65_RS06700	0.82	-1.4
1,389,305	-		DZA65_RS06700	0.82	-1.2
1,389,377	+				+0.2
1,389,378	-				+2.2
1,389,378	-				+0.5
1,389,392	+				-0.6
1,389,395	-				-1.8
1,389,486	+				-0.0
1,389,486	+				+1.2
1,389,486	+				+0.3
1,389,486	+				+0.2
1,389,487	-				-0.7
1,389,487	-				+2.2
1,389,508	+				-0.5
1,389,508	+				+0.6
1,389,508	+				-1.0
1,389,508	+				+0.9
1,389,509	-				-0.4
1,389,509	-				+1.9
1,389,509	-				+0.5
1,389,510	+				-0.9
1,389,510	+				-0.6
1,389,510	+				+0.3
1,389,510	+				-0.8
1,389,510	+				-0.0
1,389,510	+				-1.1
1,389,510	+				-1.0
1,389,510	+				-1.6
1,389,510	+				-1.3
1,389,510	+				-0.0
1,389,511	-				-0.7
1,389,511	-				+0.2
1,389,511	-				-0.0
1,389,511	-				-0.3
1,389,511	-				+1.4
1,389,511	-				-0.0
1,389,511	-				-0.4
1,389,511	-				+0.4
1,389,511	-				+1.6
1,389,511	-				-0.9
1,389,511	-				+1.7
1,389,526	+				-0.4
1,389,526	+				+0.6
1,389,526	+				+0.8
1,389,526	+				-0.1
1,389,526	+				-0.2
1,389,526	+				-1.6
1,389,527	-				-0.1
1,389,527	-				+1.0
1,389,527	-				+0.7
1,389,527	-				-0.0
1,389,527	-				-0.2
1,389,527	-				+0.5
1,389,529	+				-0.1
1,389,529	+				-0.6
1,389,529	+				-2.0
1,389,529	+				-0.2
1,389,529	+				+0.6
1,389,554	+				+0.4
1,389,569	+				-2.5
1,389,570	-				+0.5
1,389,602	-				+0.3
1,389,604	+				+1.2
1,389,617	+				+0.0
1,389,618	-				-0.0
1,389,654	-				-0.6
1,389,657	+				+0.9
1,389,735	+				+0.5
1,389,735	+				-0.3
1,389,735	+				+0.4
1,389,736	-				-1.4
1,389,736	-				+0.4
1,389,736	-				-0.4
1,389,736	-				+1.0
1,389,737	+				-0.3
1,389,737	+				-0.8
1,389,737	+				-1.0
1,389,738	-				-0.6
1,389,740	+				-0.6
1,389,741	-				-0.5
1,389,741	-				-0.8
1,389,792	+				-0.6
1,389,792	+				-0.4
1,389,792	+				+0.4
1,389,793	-				-1.4
1,389,793	-				-1.4
1,389,793	-				-0.5
1,389,803	-				-0.6
1,389,806	+				-0.7
1,389,807	-				-0.1
1,389,807	-				+0.1
1,389,881	-				-0.2
1,389,963	+		DZA65_RS06705	0.12	-0.2
1,389,963	+		DZA65_RS06705	0.12	-0.9
1,389,964	-		DZA65_RS06705	0.12	-0.4
1,389,964	-		DZA65_RS06705	0.12	+0.6
1,389,964	-		DZA65_RS06705	0.12	+1.5
1,389,964	-		DZA65_RS06705	0.12	+0.6
1,389,964	-		DZA65_RS06705	0.12	+0.3
1,389,999	+		DZA65_RS06705	0.14	-1.3
1,389,999	+		DZA65_RS06705	0.14	-1.6
1,389,999	+		DZA65_RS06705	0.14	-1.5
1,389,999	+		DZA65_RS06705	0.14	+0.8
1,389,999	+		DZA65_RS06705	0.14	-0.7
1,389,999	+		DZA65_RS06705	0.14	+0.3
1,389,999	+		DZA65_RS06705	0.14	-0.1
1,389,999	+		DZA65_RS06705	0.14	-0.3
1,389,999	+		DZA65_RS06705	0.14	-1.4
1,390,000	-		DZA65_RS06705	0.14	-0.1
1,390,000	-		DZA65_RS06705	0.14	+0.6
1,390,000	-		DZA65_RS06705	0.14	-0.9
1,390,000	-		DZA65_RS06705	0.14	-1.2
1,390,011	+		DZA65_RS06705	0.15	-0.2
1,390,011	+		DZA65_RS06705	0.15	-0.0
1,390,011	+		DZA65_RS06705	0.15	+0.2
1,390,101	+		DZA65_RS06705	0.21	-0.1
1,390,101	+		DZA65_RS06705	0.21	-0.9
1,390,101	+		DZA65_RS06705	0.21	-1.0
1,390,102	-		DZA65_RS06705	0.21	+0.1
1,390,102	-		DZA65_RS06705	0.21	-0.4
1,390,132	-		DZA65_RS06705	0.23	-1.8
1,390,189	+		DZA65_RS06705	0.27	-0.1
1,390,189	+		DZA65_RS06705	0.27	-1.0
1,390,189	+		DZA65_RS06705	0.27	-2.0
1,390,189	+		DZA65_RS06705	0.27	+0.3
1,390,190	-		DZA65_RS06705	0.27	-1.1
1,390,303	+		DZA65_RS06705	0.35	+0.9
1,390,303	+		DZA65_RS06705	0.35	+1.2
1,390,303	+		DZA65_RS06705	0.35	+0.1
1,390,303	+		DZA65_RS06705	0.35	-0.3
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1,390,303	+		DZA65_RS06705	0.35	-0.1
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1,390,304	-		DZA65_RS06705	0.35	-0.0
1,390,304	-		DZA65_RS06705	0.35	-1.1
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1,390,304	-		DZA65_RS06705	0.35	-0.5
1,390,304	-		DZA65_RS06705	0.35	+0.7
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1,390,304	-		DZA65_RS06705	0.35	-1.5
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1,390,321	+		DZA65_RS06705	0.36	-0.3
1,390,321	+		DZA65_RS06705	0.36	+1.4
1,390,321	+		DZA65_RS06705	0.36	+0.3
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1,390,321	+		DZA65_RS06705	0.36	-1.3
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1,390,384	+		DZA65_RS06705	0.41	-0.4
1,390,384	+		DZA65_RS06705	0.41	+0.1
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1,390,384	+		DZA65_RS06705	0.41	-2.0
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1,390,385	-		DZA65_RS06705	0.41	-0.1
1,390,385	-		DZA65_RS06705	0.41	-0.8
1,390,385	-		DZA65_RS06705	0.41	-0.1
1,390,385	-		DZA65_RS06705	0.41	-0.5
1,390,385	-		DZA65_RS06705	0.41	-0.6
1,390,385	-		DZA65_RS06705	0.41	-0.8
1,390,385	-		DZA65_RS06705	0.41	-2.3
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1,390,385	-		DZA65_RS06705	0.41	+0.0
1,390,385	-		DZA65_RS06705	0.41	-0.7
1,390,385	-		DZA65_RS06705	0.41	+0.2
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1,390,385	-		DZA65_RS06705	0.41	-0.0
1,390,385	-		DZA65_RS06705	0.41	+0.6
1,390,385	-		DZA65_RS06705	0.41	-0.8