Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06425

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,338,114	+		DZA65_RS06420	0.30	-0.6
1,338,114	+		DZA65_RS06420	0.30	+0.8
1,338,114	+		DZA65_RS06420	0.30	-1.0
1,338,114	+		DZA65_RS06420	0.30	+0.1
1,338,114	+		DZA65_RS06420	0.30	-0.4
1,338,114	+		DZA65_RS06420	0.30	+0.2
1,338,114	+		DZA65_RS06420	0.30	-0.3
1,338,114	+		DZA65_RS06420	0.30	+0.3
1,338,115	-		DZA65_RS06420	0.30	+1.1
1,338,115	-		DZA65_RS06420	0.30	-0.3
1,338,115	-		DZA65_RS06420	0.30	-0.2
1,338,115	-		DZA65_RS06420	0.30	+0.4
1,338,154	+		DZA65_RS06420	0.34	-0.5
1,338,231	+				-1.4
1,338,232	-		DZA65_RS06420	0.41	-0.4
1,338,232	-		DZA65_RS06420	0.41	+0.6
1,338,232	-		DZA65_RS06420	0.41	+0.7
1,338,232	-		DZA65_RS06420	0.41	-0.2
1,338,232	-		DZA65_RS06420	0.41	-0.9
1,338,380	-		DZA65_RS06420	0.56	-0.1
1,338,380	-		DZA65_RS06420	0.56	-0.4
1,338,380	-		DZA65_RS06420	0.56	+1.1
1,338,380	-		DZA65_RS06420	0.56	+0.5
1,338,380	-		DZA65_RS06420	0.56	-1.0
1,338,394	+		DZA65_RS06420	0.57	-1.6
1,338,394	+		DZA65_RS06420	0.57	+0.6
1,338,394	+		DZA65_RS06420	0.57	-0.4
1,338,394	+		DZA65_RS06420	0.57	-0.1
1,338,394	+		DZA65_RS06420	0.57	+0.1
1,338,395	-		DZA65_RS06420	0.57	+0.9
1,338,395	-		DZA65_RS06420	0.57	-1.0
1,338,395	-		DZA65_RS06420	0.57	+0.7
1,338,514	+		DZA65_RS06420	0.69	-0.4
1,338,517	+		DZA65_RS06420	0.69	-0.1
1,338,517	+		DZA65_RS06420	0.69	-0.6
1,338,517	+		DZA65_RS06420	0.69	-0.2
1,338,518	-		DZA65_RS06420	0.69	-1.1
1,338,518	-		DZA65_RS06420	0.69	+1.0
1,338,518	-		DZA65_RS06420	0.69	+0.2
1,338,596	+		DZA65_RS06420	0.76	-1.1
1,338,676	+		DZA65_RS06420	0.84	+0.1
1,338,726	-		DZA65_RS06420	0.89	+0.4
1,338,726	-		DZA65_RS06420	0.89	+0.5
1,338,726	-		DZA65_RS06420	0.89	-0.1
1,338,753	+				-0.1
1,338,753	+				-0.2
1,338,765	-				-0.3
1,338,771	+				-0.2
1,338,772	-				-0.3
1,338,772	-				-1.4
1,338,813	-				+0.1
1,338,813	-				-1.0
1,338,813	-				-0.9
1,338,814	+				+0.5
1,338,814	+				-0.8
1,338,815	-				-0.4
1,338,815	-				+0.2
1,338,815	-				+0.7
1,338,815	-				-0.6
1,338,815	-				-0.8
1,338,815	-				+0.3
1,338,872	+				-0.8
1,338,895	+				+0.1
1,338,896	-				-1.0
1,338,896	-				+1.5
1,338,903	+				-0.2
1,339,038	-				-1.1
1,339,038	-				-0.4
1,339,044	+				-2.0
1,339,044	+				-0.6
1,339,045	-				+0.2
1,339,045	-				-1.6
1,339,045	-				-1.5
1,339,061	+				+0.7
1,339,061	+				-1.2
1,339,063	+				+0.3
1,339,063	+				-1.4
1,339,064	-				-0.0
1,339,064	-				+0.0
1,339,064	-				-1.9
1,339,064	-				-0.3
1,339,111	+				+0.0
1,339,112	-				-1.0
1,339,151	+				+0.1
1,339,151	+				+0.2
1,339,151	+				-0.9
1,339,151	+				+0.6
1,339,151	+				-0.3
1,339,151	+				-1.7
1,339,151	+				+1.5
1,339,152	-				-0.7
1,339,152	-				+0.2
1,339,152	-				-1.4
1,339,152	-				-2.1
1,339,152	-				+0.7
1,339,185	-		DZA65_RS06425	0.11	-0.0
1,339,233	+		DZA65_RS06425	0.19	-1.1
1,339,233	+		DZA65_RS06425	0.19	-0.7
1,339,234	-		DZA65_RS06425	0.19	-0.4
1,339,325	+		DZA65_RS06425	0.34	-0.7
1,339,325	+		DZA65_RS06425	0.34	+0.2
1,339,417	-		DZA65_RS06425	0.48	+0.9
1,339,484	+		DZA65_RS06425	0.59	-1.2
1,339,484	+		DZA65_RS06425	0.59	-0.4
1,339,648	-		DZA65_RS06425	0.85	-1.1
1,339,686	+				+0.2
1,339,686	+				-0.1
1,339,686	+				-0.1
1,339,686	+				-0.7
1,339,686	+				+0.2
1,339,686	+				-0.5
1,339,687	-				+0.2
1,339,687	-				+0.0
1,339,687	-				-0.8
1,339,687	-				+0.9
1,339,687	-				+0.8
1,339,731	-				-1.7
1,339,740	+				+0.9
1,339,740	+				-0.4
1,339,819	-				+0.1
1,339,819	-				+0.7
1,339,904	+				-0.4
1,339,905	-				-1.0
1,339,905	-				-1.4
1,339,905	-				-0.0
1,339,905	-				-0.2
1,339,905	-				-0.8
1,340,088	+		DZA65_RS06430	0.13	+0.4
1,340,088	+		DZA65_RS06430	0.13	-0.0
1,340,088	+		DZA65_RS06430	0.13	-1.5
1,340,089	-		DZA65_RS06430	0.13	-0.2
1,340,089	-		DZA65_RS06430	0.13	+0.1
1,340,102	+		DZA65_RS06430	0.14	-2.8
1,340,103	-		DZA65_RS06430	0.14	-0.0
1,340,121	+		DZA65_RS06430	0.15	-0.4
1,340,121	+		DZA65_RS06430	0.15	-0.9
1,340,122	-		DZA65_RS06430	0.16	+0.1
1,340,122	-		DZA65_RS06430	0.16	-0.1
1,340,122	-		DZA65_RS06430	0.16	-0.1
1,340,155	+		DZA65_RS06430	0.18	-0.7
1,340,156	-		DZA65_RS06430	0.18	+1.6
1,340,156	-		DZA65_RS06430	0.18	-0.4
1,340,156	-		DZA65_RS06430	0.18	-0.3
1,340,164	+		DZA65_RS06430	0.19	+1.2
1,340,165	-		DZA65_RS06430	0.19	-0.7
1,340,388	-		DZA65_RS06430	0.36	+0.1
1,340,388	-		DZA65_RS06430	0.36	+0.4
1,340,399	+		DZA65_RS06430	0.37	-0.7
1,340,399	+		DZA65_RS06430	0.37	-1.6
1,340,400	-		DZA65_RS06430	0.37	+0.5
1,340,496	+		DZA65_RS06430	0.44	+0.2
1,340,496	+		DZA65_RS06430	0.44	-0.3
1,340,496	+		DZA65_RS06430	0.44	+0.1
1,340,497	-		DZA65_RS06430	0.44	-1.0
1,340,574	+		DZA65_RS06430	0.50	+0.1
1,340,575	-		DZA65_RS06430	0.50	-0.6
1,340,575	-		DZA65_RS06430	0.50	-1.1
1,340,672	+		DZA65_RS06430	0.58	-1.4