Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS05795

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,189,208	-		DZA65_RS05790	0.45	-0.1
1,189,244	-		DZA65_RS05790	0.49	+0.4
1,189,262	-		DZA65_RS05790	0.51	-0.7
1,189,262	-		DZA65_RS05790	0.51	-0.5
1,189,310	-		DZA65_RS05790	0.56	+0.6
1,189,310	-		DZA65_RS05790	0.56	-0.1
1,189,340	-		DZA65_RS05790	0.60	-2.3
1,189,680	+				+0.4
1,189,752	+				+0.3
1,189,752	+				-1.2
1,189,753	-				-0.3
1,189,784	-				-0.9
1,189,802	-				-1.2
1,189,830	-				-0.0
1,189,830	-				-0.5
1,189,864	+				+0.1
1,189,886	+				+0.0
1,189,886	+				-1.1
1,189,887	-				-0.6
1,189,887	-				-0.1
1,189,887	-				+0.3
1,189,887	-				-0.6
1,189,887	-				-0.2
1,189,887	-				-0.8
1,189,887	-				+1.3
1,189,887	-				-0.7
1,189,890	+				+0.3
1,189,890	+				+0.0
1,189,890	+				+0.0
1,189,890	+				-1.3
1,189,891	-				+0.3
1,189,891	-				-1.6
1,189,891	-				-1.8
1,189,891	-				-0.6
1,189,891	-				+0.8
1,189,984	+		DZA65_RS05795	0.12	+0.0
1,190,019	-		DZA65_RS05795	0.15	-0.3
1,190,408	-		DZA65_RS05795	0.58	+0.7
1,190,408	-		DZA65_RS05795	0.58	+0.9
1,190,439	+		DZA65_RS05795	0.61	-1.9
1,190,439	+		DZA65_RS05795	0.61	-1.0
1,190,440	-		DZA65_RS05795	0.62	-1.0
1,190,440	-		DZA65_RS05795	0.62	-0.2
1,190,508	+				+0.7
1,190,508	+		DZA65_RS05795	0.69	-0.2
1,190,560	+		DZA65_RS05795	0.75	-1.9
1,190,561	-		DZA65_RS05795	0.75	+0.3
1,190,659	+		DZA65_RS05795	0.86	-0.2
1,190,659	+		DZA65_RS05795	0.86	-0.4
1,190,659	+		DZA65_RS05795	0.86	-0.8
1,190,660	-		DZA65_RS05795	0.86	-0.2
1,190,660	-		DZA65_RS05795	0.86	+0.3
1,190,694	-		DZA65_RS05795	0.89	-1.9
1,190,694	-		DZA65_RS05795	0.89	+0.1
1,190,829	-				+0.0
1,190,829	-				-0.4
1,190,904	+				+0.3
1,190,905	-				+0.7
1,191,127	-				+0.3
1,191,210	-		DZA65_RS05800	0.10	+1.3
1,191,457	+		DZA65_RS05800	0.17	-1.1
1,191,457	+		DZA65_RS05800	0.17	-0.2
1,191,457	+		DZA65_RS05800	0.17	-1.9
1,191,457	+		DZA65_RS05800	0.17	-0.1
1,191,457	+		DZA65_RS05800	0.17	-1.5
1,191,457	+		DZA65_RS05800	0.17	+1.0
1,191,458	-		DZA65_RS05800	0.17	+0.3
1,191,458	-		DZA65_RS05800	0.17	+0.1
1,191,458	-		DZA65_RS05800	0.17	-0.6
1,191,458	-		DZA65_RS05800	0.17	+0.0
1,191,458	-		DZA65_RS05800	0.17	+0.6
1,191,617	-		DZA65_RS05800	0.21	-0.2