Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS05245

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,078,837	-				-1.7
1,078,837	-				+0.9
1,078,837	-				+0.9
1,078,837	-				-0.6
1,078,855	-				-0.3
1,078,855	-				-0.7
1,078,918	+		DZA65_RS05240	0.30	-0.9
1,078,918	+		DZA65_RS05240	0.30	-0.4
1,078,919	-		DZA65_RS05240	0.31	-0.9
1,078,960	+		DZA65_RS05240	0.46	+0.2
1,079,016	+				-0.3
1,079,016	+		DZA65_RS05240	0.66	-1.3
1,079,016	+		DZA65_RS05240	0.66	-1.7
1,079,016	+		DZA65_RS05240	0.66	+2.1
1,079,016	+		DZA65_RS05240	0.66	-0.4
1,079,016	+		DZA65_RS05240	0.66	-1.4
1,079,016	+		DZA65_RS05240	0.66	+0.1
1,079,016	+		DZA65_RS05240	0.66	-0.6
1,079,016	+		DZA65_RS05240	0.66	-0.7
1,079,016	+		DZA65_RS05240	0.66	-0.1
1,079,017	-		DZA65_RS05240	0.67	+0.2
1,079,017	-		DZA65_RS05240	0.67	-0.1
1,079,017	-		DZA65_RS05240	0.67	-1.0
1,079,017	-		DZA65_RS05240	0.67	-1.2
1,079,017	-		DZA65_RS05240	0.67	+0.4
1,079,017	-		DZA65_RS05240	0.67	-1.2
1,079,079	-		DZA65_RS05240	0.89	+1.5
1,079,086	+				-0.9
1,079,111	+				-0.7
1,079,111	+				+0.3
1,079,112	-				-1.1
1,079,112	-				+0.3
1,079,112	-				-0.5
1,079,112	-				-1.3
1,079,112	-				+0.5
1,079,112	-				-0.0
1,079,170	+				-0.0
1,079,223	+		DZA65_RS05245	0.10	+0.3
1,079,223	+		DZA65_RS05245	0.10	-1.2
1,079,223	+		DZA65_RS05245	0.10	-0.7
1,079,223	+		DZA65_RS05245	0.10	+0.3
1,079,223	+		DZA65_RS05245	0.10	-0.1
1,079,224	-		DZA65_RS05245	0.10	-0.1
1,079,224	-		DZA65_RS05245	0.10	-0.8
1,079,225	+		DZA65_RS05245	0.11	-0.6
1,079,225	+		DZA65_RS05245	0.11	-1.7
1,079,226	-		DZA65_RS05245	0.11	-0.7
1,079,226	-		DZA65_RS05245	0.11	+0.1
1,079,226	-		DZA65_RS05245	0.11	+0.6
1,079,316	+		DZA65_RS05245	0.19	-0.3
1,079,317	-		DZA65_RS05245	0.19	-1.3
1,079,317	-		DZA65_RS05245	0.19	-0.9
1,079,317	-		DZA65_RS05245	0.19	-1.3
1,079,417	+		DZA65_RS05245	0.28	-0.5
1,079,418	-		DZA65_RS05245	0.28	-0.7
1,079,418	-		DZA65_RS05245	0.28	+0.3
1,079,418	-		DZA65_RS05245	0.28	-0.9
1,079,551	-		DZA65_RS05245	0.41	-0.6
1,079,551	-		DZA65_RS05245	0.41	-0.7
1,079,551	-		DZA65_RS05245	0.41	-0.3
1,079,551	-		DZA65_RS05245	0.41	-1.3
1,079,562	-		DZA65_RS05245	0.42	-0.8
1,079,713	+		DZA65_RS05245	0.56	-0.6
1,079,713	+		DZA65_RS05245	0.56	+0.9
1,079,713	+		DZA65_RS05245	0.56	-0.3
1,079,713	+		DZA65_RS05245	0.56	-0.5
1,079,714	-		DZA65_RS05245	0.56	+0.4
1,079,714	-		DZA65_RS05245	0.56	+0.1
1,079,820	+		DZA65_RS05245	0.65	+1.0
1,079,945	+		DZA65_RS05245	0.77	-0.5
1,079,945	+		DZA65_RS05245	0.77	-0.3
1,079,946	-		DZA65_RS05245	0.77	-0.2
1,079,946	-		DZA65_RS05245	0.77	+0.5
1,079,946	-		DZA65_RS05245	0.77	+0.7
1,079,949	-		DZA65_RS05245	0.77	-0.4
1,080,028	-		DZA65_RS05245	0.85	+0.8
1,080,041	+		DZA65_RS05245	0.86	-0.1
1,080,099	+				+0.1
1,080,099	+				-0.7
1,080,099	+				+0.2
1,080,100	-				-0.4
1,080,100	-				-0.0
1,080,100	-				-0.7
1,080,100	-				-2.2
1,080,101	+				-0.2
1,080,102	-				-0.7
1,080,102	-				-0.0
1,080,102	-				+1.6
1,080,102	-				-0.4
1,080,102	-				+0.2
1,080,102	-				-0.7
1,080,135	+				-0.1
1,080,135	+				-1.9
1,080,152	+				-0.6
1,080,152	+				+0.2
1,080,163	+				+1.5
1,080,195	+				-1.7
1,080,196	-				-1.1
1,080,254	+				+0.3
1,080,254	+				+1.3
1,080,254	+				-1.0
1,080,254	+				-0.0
1,080,254	+				-0.5
1,080,255	-				-0.9
1,080,255	-				-0.2
1,080,259	+				-0.1
1,080,259	+				+0.6
1,080,260	-				+0.5
1,080,284	+				+0.4
1,080,285	-				-1.3
1,080,291	+				-0.9
1,080,292	-				+0.8
1,080,292	-				+1.0
1,080,301	+				-0.3
1,080,302	-				-2.0
1,080,353	+				-0.4
1,080,353	+				+0.1
1,080,353	+				-1.5
1,080,353	+				+0.5
1,080,353	+				-0.6
1,080,353	+				-0.4
1,080,354	-				-0.6
1,080,354	-				+0.6
1,080,354	-				-1.6
1,080,354	-				+0.5
1,080,354	-				+0.0
1,080,362	+				+0.9
1,080,407	+				+0.7
1,080,408	-				+0.3
1,080,529	+		DZA65_RS05250	0.24	+0.3
1,080,630	-		DZA65_RS05250	0.38	+0.5
1,080,631	+		DZA65_RS05250	0.38	-0.3
1,080,631	+		DZA65_RS05250	0.38	-0.1
1,080,631	+		DZA65_RS05250	0.38	+0.2
1,080,631	+		DZA65_RS05250	0.38	-0.7
1,080,631	+		DZA65_RS05250	0.38	+0.8
1,080,632	-		DZA65_RS05250	0.39	-1.6
1,080,632	-		DZA65_RS05250	0.39	-0.5
1,080,632	-		DZA65_RS05250	0.39	-0.6
1,080,632	-		DZA65_RS05250	0.39	+0.5
1,080,632	-		DZA65_RS05250	0.39	-0.9
1,080,632	-				+0.9
1,080,632	-		DZA65_RS05250	0.39	-1.7
1,080,632	-				+0.3
1,080,809	+		DZA65_RS05250	0.63	+0.1
1,080,809	+		DZA65_RS05250	0.63	+0.4
1,080,810	-		DZA65_RS05250	0.63	-1.6
1,080,903	+		DZA65_RS05250	0.76	+0.6
1,080,903	+		DZA65_RS05250	0.76	-0.8
1,080,914	+		DZA65_RS05250	0.78	-0.3
1,080,914	+		DZA65_RS05250	0.78	-0.5
1,080,914	+		DZA65_RS05250	0.78	-0.3
1,080,914	+		DZA65_RS05250	0.78	+0.8
1,080,914	+		DZA65_RS05250	0.78	+0.4
1,080,915	-		DZA65_RS05250	0.78	-2.2
1,080,915	-		DZA65_RS05250	0.78	+0.3
1,080,915	-		DZA65_RS05250	0.78	+1.1
1,080,915	-		DZA65_RS05250	0.78	+0.7
1,080,915	-		DZA65_RS05250	0.78	+0.1
1,080,915	-		DZA65_RS05250	0.78	+0.4
1,080,915	-		DZA65_RS05250	0.78	-1.6
1,080,915	-		DZA65_RS05250	0.78	-0.1
1,080,915	-		DZA65_RS05250	0.78	+0.3
1,080,965	+		DZA65_RS05250	0.85	+0.0
1,080,965	+		DZA65_RS05250	0.85	+0.2
1,080,966	-		DZA65_RS05250	0.85	-0.7
1,080,966	-		DZA65_RS05250	0.85	-0.6
1,080,966	-		DZA65_RS05250	0.85	-1.0
1,080,966	-		DZA65_RS05250	0.85	-1.3
1,080,972	+		DZA65_RS05250	0.86	+0.4
1,080,972	+		DZA65_RS05250	0.86	+0.9
1,080,972	+		DZA65_RS05250	0.86	-0.4
1,080,972	+		DZA65_RS05250	0.86	-1.5
1,080,972	+		DZA65_RS05250	0.86	+1.9
1,080,973	-		DZA65_RS05250	0.86	+0.5
1,080,973	-		DZA65_RS05250	0.86	-1.4
1,080,973	-		DZA65_RS05250	0.86	-0.4
1,080,973	-		DZA65_RS05250	0.86	+0.4
1,081,072	-				-0.5
1,081,079	-				-0.1
1,081,099	-				+2.9
1,081,102	+				-1.2
1,081,103	-				-0.3
1,081,103	-				+0.3