Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS03860 and DZA65_RS03865 are separated by 528 nucleotides DZA65_RS03865 and DZA65_RS03870 are separated by 85 nucleotides
DZA65_RS03860: DZA65_RS03860 - 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing), at 818,030 to 819,961
_RS03860
DZA65_RS03865: DZA65_RS03865 - inositol 2-dehydrogenase, at 820,490 to 821,476
_RS03865
DZA65_RS03870: DZA65_RS03870 - sugar ABC transporter substrate-binding protein, at 821,562 to 822,500
_RS03870
Position (kb) 820
821
822 Strain fitness (log2 ratio) -2
-1
0
1
2 at 819.512 kb on + strand, within DZA65_RS03860 at 819.512 kb on + strand, within DZA65_RS03860 at 819.513 kb on - strand, within DZA65_RS03860 at 819.513 kb on - strand, within DZA65_RS03860 at 819.565 kb on - strand, within DZA65_RS03860 at 819.728 kb on + strand, within DZA65_RS03860 at 819.933 kb on + strand at 819.933 kb on + strand at 819.934 kb on - strand at 819.934 kb on - strand at 819.934 kb on - strand at 819.934 kb on - strand at 819.956 kb on + strand at 819.956 kb on + strand at 819.956 kb on + strand at 819.956 kb on + strand at 819.957 kb on - strand at 819.957 kb on - strand at 819.957 kb on - strand at 819.957 kb on - strand at 819.957 kb on - strand at 819.957 kb on - strand at 819.957 kb on - strand at 819.959 kb on + strand at 819.959 kb on + strand at 819.959 kb on + strand at 819.959 kb on + strand at 819.960 kb on - strand at 819.960 kb on - strand at 819.998 kb on + strand at 819.999 kb on - strand at 820.045 kb on + strand at 820.045 kb on + strand at 820.045 kb on + strand at 820.046 kb on - strand at 820.046 kb on - strand at 820.046 kb on - strand at 820.067 kb on + strand at 820.067 kb on + strand at 820.068 kb on - strand at 820.110 kb on + strand at 820.111 kb on - strand at 820.134 kb on + strand at 820.134 kb on + strand at 820.171 kb on - strand at 820.174 kb on + strand at 820.174 kb on + strand at 820.228 kb on - strand at 820.228 kb on - strand at 820.244 kb on - strand at 820.247 kb on - strand at 820.259 kb on + strand at 820.260 kb on - strand at 820.286 kb on - strand at 820.286 kb on - strand at 820.286 kb on - strand at 820.327 kb on + strand at 820.327 kb on + strand at 820.338 kb on + strand at 820.338 kb on + strand at 820.339 kb on - strand at 820.339 kb on - strand at 820.339 kb on - strand at 820.339 kb on - strand at 820.419 kb on - strand at 820.424 kb on - strand at 820.424 kb on - strand at 820.424 kb on - strand at 820.424 kb on - strand at 820.424 kb on - strand at 820.448 kb on + strand at 820.448 kb on + strand at 820.448 kb on + strand at 820.448 kb on + strand at 820.448 kb on + strand at 820.448 kb on + strand at 820.449 kb on - strand at 820.485 kb on + strand at 820.486 kb on - strand at 820.495 kb on + strand at 820.495 kb on + strand at 820.575 kb on - strand at 820.575 kb on - strand at 820.575 kb on - strand at 820.575 kb on - strand at 820.625 kb on + strand, within DZA65_RS03865 at 820.625 kb on + strand, within DZA65_RS03865 at 820.626 kb on - strand, within DZA65_RS03865 at 820.626 kb on - strand, within DZA65_RS03865 at 820.674 kb on + strand, within DZA65_RS03865 at 820.690 kb on - strand, within DZA65_RS03865 at 820.690 kb on - strand, within DZA65_RS03865 at 820.856 kb on + strand, within DZA65_RS03865 at 820.931 kb on - strand, within DZA65_RS03865 at 820.931 kb on - strand, within DZA65_RS03865 at 820.931 kb on - strand, within DZA65_RS03865 at 820.931 kb on - strand, within DZA65_RS03865 at 820.931 kb on - strand, within DZA65_RS03865 at 820.931 kb on - strand, within DZA65_RS03865 at 820.964 kb on + strand, within DZA65_RS03865 at 820.964 kb on + strand, within DZA65_RS03865 at 820.965 kb on - strand, within DZA65_RS03865 at 820.965 kb on - strand, within DZA65_RS03865 at 820.965 kb on - strand, within DZA65_RS03865 at 820.965 kb on - strand, within DZA65_RS03865 at 820.965 kb on - strand, within DZA65_RS03865 at 820.965 kb on - strand, within DZA65_RS03865 at 820.965 kb on - strand, within DZA65_RS03865 at 821.032 kb on + strand, within DZA65_RS03865 at 821.032 kb on + strand, within DZA65_RS03865 at 821.079 kb on + strand, within DZA65_RS03865 at 821.080 kb on - strand, within DZA65_RS03865 at 821.080 kb on - strand, within DZA65_RS03865 at 821.333 kb on + strand, within DZA65_RS03865 at 821.420 kb on + strand at 821.421 kb on - strand at 821.421 kb on - strand at 821.421 kb on - strand at 821.421 kb on - strand at 821.479 kb on + strand at 821.479 kb on + strand at 821.479 kb on + strand at 821.480 kb on - strand at 821.480 kb on - strand at 821.480 kb on - strand at 821.480 kb on - strand at 821.480 kb on - strand at 821.483 kb on + strand at 821.483 kb on + strand at 821.483 kb on + strand at 821.483 kb on + strand at 821.483 kb on + strand at 821.484 kb on - strand at 821.484 kb on - strand at 821.484 kb on - strand at 821.484 kb on - strand at 821.484 kb on - strand at 821.484 kb on - strand at 821.484 kb on - strand at 821.484 kb on - strand at 821.484 kb on - strand at 821.484 kb on - strand at 821.514 kb on + strand at 821.515 kb on - strand at 821.515 kb on - strand at 821.528 kb on + strand at 821.528 kb on + strand at 821.528 kb on + strand at 821.529 kb on - strand at 821.529 kb on - strand at 821.529 kb on - strand at 821.529 kb on - strand at 821.529 kb on - strand at 821.572 kb on + strand at 821.572 kb on + strand at 821.573 kb on - strand at 821.946 kb on + strand, within DZA65_RS03870 at 821.946 kb on + strand, within DZA65_RS03870 at 821.946 kb on + strand, within DZA65_RS03870 at 821.946 kb on + strand, within DZA65_RS03870 at 821.946 kb on + strand, within DZA65_RS03870 at 821.946 kb on + strand, within DZA65_RS03870 at 821.946 kb on + strand, within DZA65_RS03870 at 821.946 kb on + strand, within DZA65_RS03870 at 821.947 kb on - strand, within DZA65_RS03870 at 821.947 kb on - strand, within DZA65_RS03870 at 821.947 kb on - strand, within DZA65_RS03870 at 821.947 kb on - strand, within DZA65_RS03870 at 821.947 kb on - strand, within DZA65_RS03870 at 821.947 kb on - strand, within DZA65_RS03870 at 822.053 kb on + strand, within DZA65_RS03870 at 822.053 kb on + strand, within DZA65_RS03870 at 822.054 kb on - strand, within DZA65_RS03870 at 822.054 kb on - strand, within DZA65_RS03870 at 822.054 kb on - strand, within DZA65_RS03870 at 822.054 kb on - strand, within DZA65_RS03870 at 822.097 kb on - strand, within DZA65_RS03870 at 822.398 kb on + strand, within DZA65_RS03870 at 822.398 kb on + strand, within DZA65_RS03870 at 822.398 kb on + strand, within DZA65_RS03870 at 822.399 kb on - strand, within DZA65_RS03870 at 822.399 kb on - strand, within DZA65_RS03870
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 819,512 + DZA65_RS03860 0.77 +0.7 819,512 + DZA65_RS03860 0.77 +1.8 819,513 - DZA65_RS03860 0.77 -0.4 819,513 - DZA65_RS03860 0.77 -1.6 819,565 - DZA65_RS03860 0.79 +2.1 819,728 + DZA65_RS03860 0.88 -0.5 819,933 + -0.5 819,933 + -2.5 819,934 - +0.2 819,934 - -0.7 819,934 - -0.0 819,934 - -2.0 819,956 + +0.4 819,956 + +0.2 819,956 + -0.2 819,956 + -0.1 819,957 - +0.4 819,957 - +0.6 819,957 - +0.1 819,957 - -1.0 819,957 - -0.4 819,957 - -0.9 819,957 - -0.4 819,959 + -0.2 819,959 + -0.8 819,959 + -0.1 819,959 + -1.2 819,960 - -0.2 819,960 - -1.6 819,998 + +0.2 819,999 - -0.1 820,045 + +0.4 820,045 + -1.0 820,045 + -0.5 820,046 - -0.3 820,046 - +0.0 820,046 - -0.6 820,067 + +0.8 820,067 + +0.1 820,068 - -1.8 820,110 + -1.5 820,111 - +0.5 820,134 + +0.3 820,134 + -0.2 820,171 - -0.5 820,174 + -0.5 820,174 + -0.8 820,228 - -0.0 820,228 - -1.4 820,244 - -0.9 820,247 - -0.4 820,259 + +0.6 820,260 - -0.2 820,286 - -0.2 820,286 - -0.8 820,286 - +0.2 820,327 + -0.4 820,327 + +0.5 820,338 + -0.4 820,338 + +0.8 820,339 - -0.6 820,339 - +0.3 820,339 - -0.9 820,339 - -0.5 820,419 - -0.2 820,424 - -0.8 820,424 - -0.2 820,424 - -1.3 820,424 - +1.2 820,424 - +0.4 820,448 + +0.7 820,448 + +0.5 820,448 + +0.2 820,448 + +2.4 820,448 + +0.1 820,448 + +1.2 820,449 - -0.5 820,485 + +0.5 820,486 - -0.4 820,495 + -0.3 820,495 + +0.5 820,575 - +0.1 820,575 - -0.5 820,575 - +0.4 820,575 - -0.5 820,625 + DZA65_RS03865 0.14 +0.7 820,625 + DZA65_RS03865 0.14 -0.3 820,626 - DZA65_RS03865 0.14 -0.7 820,626 - DZA65_RS03865 0.14 +0.7 820,674 + DZA65_RS03865 0.19 +0.4 820,690 - DZA65_RS03865 0.20 -0.3 820,690 - DZA65_RS03865 0.20 -2.1 820,856 + DZA65_RS03865 0.37 -0.0 820,931 - DZA65_RS03865 0.45 +0.1 820,931 - DZA65_RS03865 0.45 -0.8 820,931 - DZA65_RS03865 0.45 +0.8 820,931 - DZA65_RS03865 0.45 -0.7 820,931 - DZA65_RS03865 0.45 -1.1 820,931 - DZA65_RS03865 0.45 -0.9 820,964 + DZA65_RS03865 0.48 -1.6 820,964 + DZA65_RS03865 0.48 +1.1 820,965 - DZA65_RS03865 0.48 -1.0 820,965 - DZA65_RS03865 0.48 -0.9 820,965 - DZA65_RS03865 0.48 -0.2 820,965 - DZA65_RS03865 0.48 -2.0 820,965 - DZA65_RS03865 0.48 +0.2 820,965 - DZA65_RS03865 0.48 +0.7 820,965 - DZA65_RS03865 0.48 +0.0 821,032 + DZA65_RS03865 0.55 -0.1 821,032 + DZA65_RS03865 0.55 -0.2 821,079 + DZA65_RS03865 0.60 -1.7 821,080 - DZA65_RS03865 0.60 -0.2 821,080 - DZA65_RS03865 0.60 +0.1 821,333 + DZA65_RS03865 0.85 -0.1 821,420 + +0.9 821,421 - +0.4 821,421 - -0.6 821,421 - -0.9 821,421 - -0.6 821,479 + -0.3 821,479 + +0.5 821,479 + +0.8 821,480 - +1.5 821,480 - -1.6 821,480 - -0.1 821,480 - +0.4 821,480 - -1.2 821,483 + -0.3 821,483 + -0.2 821,483 + -1.2 821,483 + +0.2 821,483 + -0.6 821,484 - -2.0 821,484 - -0.0 821,484 - +2.1 821,484 - +0.1 821,484 - -0.7 821,484 - -0.5 821,484 - +0.3 821,484 - -1.1 821,484 - -0.1 821,484 - -1.0 821,514 + -0.2 821,515 - +0.9 821,515 - +0.1 821,528 + -0.9 821,528 + +0.6 821,528 + -2.0 821,529 - -0.6 821,529 - +0.3 821,529 - +0.1 821,529 - -0.2 821,529 - -0.8 821,572 + -0.5 821,572 + -1.0 821,573 - -0.1 821,946 + DZA65_RS03870 0.41 -0.0 821,946 + DZA65_RS03870 0.41 -0.3 821,946 + DZA65_RS03870 0.41 -0.1 821,946 + DZA65_RS03870 0.41 -1.1 821,946 + DZA65_RS03870 0.41 -0.3 821,946 + DZA65_RS03870 0.41 +0.8 821,946 + DZA65_RS03870 0.41 -0.5 821,946 + DZA65_RS03870 0.41 -1.8 821,947 - DZA65_RS03870 0.41 -0.3 821,947 - DZA65_RS03870 0.41 +0.6 821,947 - DZA65_RS03870 0.41 +0.4 821,947 - DZA65_RS03870 0.41 +1.0 821,947 - DZA65_RS03870 0.41 +0.6 821,947 - DZA65_RS03870 0.41 -0.0 822,053 + DZA65_RS03870 0.52 -1.0 822,053 + DZA65_RS03870 0.52 +0.4 822,054 - DZA65_RS03870 0.52 -0.6 822,054 - DZA65_RS03870 0.52 -0.2 822,054 - DZA65_RS03870 0.52 +1.0 822,054 - DZA65_RS03870 0.52 -1.0 822,097 - DZA65_RS03870 0.57 -0.2 822,398 + DZA65_RS03870 0.89 +0.8 822,398 + DZA65_RS03870 0.89 -0.5 822,398 + DZA65_RS03870 0.89 -0.0 822,399 - DZA65_RS03870 0.89 -1.2 822,399 - DZA65_RS03870 0.89 +0.8
Or see this region's nucleotide sequence