Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS03315 and DZA65_RS03320 are separated by 99 nucleotides DZA65_RS03320 and DZA65_RS03325 are separated by 122 nucleotides
DZA65_RS03315: DZA65_RS03315 - phosphopentomutase, at 702,220 to 703,443
_RS03315
DZA65_RS03320: DZA65_RS03320 - purine-nucleoside phosphorylase, at 703,543 to 704,268
_RS03320
DZA65_RS03325: DZA65_RS03325 - ATP-grasp domain-containing protein, at 704,391 to 705,629
_RS03325
Position (kb) 703
704
705 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 702.724 kb on + strand, within DZA65_RS03315 at 702.725 kb on - strand, within DZA65_RS03315 at 702.790 kb on + strand, within DZA65_RS03315 at 702.791 kb on - strand, within DZA65_RS03315 at 702.835 kb on + strand, within DZA65_RS03315 at 703.006 kb on - strand, within DZA65_RS03315 at 703.009 kb on + strand, within DZA65_RS03315 at 703.009 kb on + strand, within DZA65_RS03315 at 703.009 kb on + strand, within DZA65_RS03315 at 703.009 kb on + strand, within DZA65_RS03315 at 703.010 kb on - strand, within DZA65_RS03315 at 703.010 kb on - strand, within DZA65_RS03315 at 703.010 kb on - strand, within DZA65_RS03315 at 703.010 kb on - strand, within DZA65_RS03315 at 703.010 kb on - strand, within DZA65_RS03315 at 703.010 kb on - strand, within DZA65_RS03315 at 703.010 kb on - strand, within DZA65_RS03315 at 703.104 kb on + strand, within DZA65_RS03315 at 703.105 kb on - strand, within DZA65_RS03315 at 703.105 kb on - strand, within DZA65_RS03315 at 703.105 kb on - strand, within DZA65_RS03315 at 703.107 kb on + strand, within DZA65_RS03315 at 703.107 kb on + strand, within DZA65_RS03315 at 703.338 kb on + strand at 703.465 kb on - strand at 703.492 kb on - strand at 703.493 kb on + strand at 703.493 kb on + strand at 703.493 kb on + strand at 703.495 kb on + strand at 703.495 kb on + strand at 703.495 kb on + strand at 703.495 kb on + strand at 703.495 kb on + strand at 703.495 kb on + strand at 703.495 kb on + strand at 703.495 kb on + strand at 703.496 kb on - strand at 703.496 kb on - strand at 703.496 kb on - strand at 703.548 kb on + strand at 703.549 kb on - strand at 703.557 kb on + strand at 703.557 kb on + strand at 703.557 kb on + strand at 703.557 kb on + strand at 703.557 kb on + strand at 703.557 kb on + strand at 703.557 kb on + strand at 703.557 kb on + strand at 703.558 kb on - strand at 703.558 kb on - strand at 703.624 kb on + strand, within DZA65_RS03320 at 703.625 kb on - strand, within DZA65_RS03320 at 703.625 kb on - strand, within DZA65_RS03320 at 703.625 kb on - strand, within DZA65_RS03320 at 703.700 kb on - strand, within DZA65_RS03320 at 703.759 kb on + strand, within DZA65_RS03320 at 703.759 kb on + strand, within DZA65_RS03320 at 704.023 kb on + strand, within DZA65_RS03320 at 704.024 kb on - strand, within DZA65_RS03320 at 704.024 kb on - strand, within DZA65_RS03320 at 704.062 kb on + strand, within DZA65_RS03320 at 704.101 kb on + strand, within DZA65_RS03320 at 704.102 kb on - strand, within DZA65_RS03320 at 704.128 kb on - strand, within DZA65_RS03320 at 704.309 kb on + strand at 704.309 kb on + strand at 704.310 kb on - strand at 704.364 kb on + strand at 704.373 kb on + strand at 704.374 kb on - strand at 704.377 kb on + strand at 704.397 kb on + strand at 704.398 kb on - strand at 704.437 kb on + strand at 704.437 kb on + strand at 704.438 kb on - strand at 704.438 kb on - strand at 704.438 kb on - strand at 704.438 kb on - strand at 704.438 kb on - strand at 704.476 kb on + strand at 704.476 kb on + strand at 704.477 kb on - strand at 704.480 kb on + strand at 704.480 kb on + strand at 704.481 kb on - strand at 704.481 kb on - strand at 704.483 kb on + strand at 704.483 kb on + strand at 704.484 kb on - strand at 704.539 kb on + strand, within DZA65_RS03325 at 704.540 kb on - strand, within DZA65_RS03325 at 704.658 kb on - strand, within DZA65_RS03325 at 704.713 kb on - strand, within DZA65_RS03325 at 704.769 kb on + strand, within DZA65_RS03325 at 704.817 kb on - strand, within DZA65_RS03325 at 704.882 kb on + strand, within DZA65_RS03325 at 704.883 kb on - strand, within DZA65_RS03325 at 704.884 kb on + strand, within DZA65_RS03325 at 704.885 kb on - strand, within DZA65_RS03325 at 704.949 kb on - strand, within DZA65_RS03325 at 705.064 kb on - strand, within DZA65_RS03325 at 705.226 kb on - strand, within DZA65_RS03325
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 702,724 + DZA65_RS03315 0.41 +0.1 702,725 - DZA65_RS03315 0.41 -0.6 702,790 + DZA65_RS03315 0.47 -0.2 702,791 - DZA65_RS03315 0.47 -0.7 702,835 + DZA65_RS03315 0.50 -0.4 703,006 - DZA65_RS03315 0.64 -0.2 703,009 + DZA65_RS03315 0.64 -0.1 703,009 + DZA65_RS03315 0.64 -1.6 703,009 + DZA65_RS03315 0.64 -0.5 703,009 + DZA65_RS03315 0.64 -0.9 703,010 - DZA65_RS03315 0.65 -0.5 703,010 - DZA65_RS03315 0.65 -1.3 703,010 - DZA65_RS03315 0.65 -0.9 703,010 - DZA65_RS03315 0.65 -1.6 703,010 - DZA65_RS03315 0.65 +0.4 703,010 - DZA65_RS03315 0.65 -0.1 703,010 - DZA65_RS03315 0.65 +0.7 703,104 + DZA65_RS03315 0.72 -1.7 703,105 - DZA65_RS03315 0.72 +0.3 703,105 - DZA65_RS03315 0.72 -0.7 703,105 - DZA65_RS03315 0.72 -0.2 703,107 + DZA65_RS03315 0.72 -0.3 703,107 + DZA65_RS03315 0.72 -0.5 703,338 + -0.1 703,465 - +0.1 703,492 - -3.0 703,493 + +0.5 703,493 + +0.4 703,493 + -0.0 703,495 + -0.6 703,495 + -0.1 703,495 + -0.2 703,495 + -0.5 703,495 + -1.3 703,495 + +0.2 703,495 + -0.2 703,495 + -1.3 703,496 - -0.9 703,496 - +0.9 703,496 - +0.1 703,548 + +0.2 703,549 - -0.1 703,557 + -1.1 703,557 + +0.1 703,557 + -0.5 703,557 + -1.2 703,557 + +0.5 703,557 + -0.6 703,557 + -0.8 703,557 + +0.4 703,558 - -0.4 703,558 - +0.7 703,624 + DZA65_RS03320 0.11 -1.8 703,625 - DZA65_RS03320 0.11 -1.0 703,625 - DZA65_RS03320 0.11 -1.9 703,625 - DZA65_RS03320 0.11 -1.4 703,700 - DZA65_RS03320 0.22 -1.8 703,759 + DZA65_RS03320 0.30 +1.4 703,759 + DZA65_RS03320 0.30 -0.8 704,023 + DZA65_RS03320 0.66 -1.4 704,024 - DZA65_RS03320 0.66 +1.2 704,024 - DZA65_RS03320 0.66 +0.4 704,062 + DZA65_RS03320 0.71 +0.2 704,101 + DZA65_RS03320 0.77 -0.5 704,102 - DZA65_RS03320 0.77 -0.4 704,128 - DZA65_RS03320 0.81 -1.6 704,309 + -0.1 704,309 + -0.5 704,310 - -0.3 704,364 + -1.2 704,373 + -0.2 704,374 - +0.8 704,377 + +0.8 704,397 + -1.9 704,398 - -0.2 704,437 + -0.3 704,437 + -1.6 704,438 - +0.8 704,438 - -0.8 704,438 - -1.3 704,438 - -0.0 704,438 - +0.7 704,476 + -0.6 704,476 + -0.4 704,477 - -0.3 704,480 + -1.1 704,480 + +0.2 704,481 - -0.2 704,481 - +1.2 704,483 + -0.5 704,483 + -0.9 704,484 - +0.4 704,539 + DZA65_RS03325 0.12 -0.7 704,540 - DZA65_RS03325 0.12 +0.6 704,658 - DZA65_RS03325 0.22 -0.8 704,713 - DZA65_RS03325 0.26 +0.8 704,769 + DZA65_RS03325 0.31 +1.4 704,817 - DZA65_RS03325 0.34 +0.1 704,882 + DZA65_RS03325 0.40 -0.2 704,883 - DZA65_RS03325 0.40 -0.1 704,884 + DZA65_RS03325 0.40 -0.1 704,885 - DZA65_RS03325 0.40 -0.3 704,949 - DZA65_RS03325 0.45 +0.2 705,064 - DZA65_RS03325 0.54 +0.0 705,226 - DZA65_RS03325 0.67 -0.6
Or see this region's nucleotide sequence