Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS03310 and DZA65_RS03315 are separated by 89 nucleotides DZA65_RS03315 and DZA65_RS03320 are separated by 99 nucleotides DZA65_RS03320 and DZA65_RS03325 are separated by 122 nucleotides
DZA65_RS03310: DZA65_RS03310 - thymidine phosphorylase, at 700,799 to 702,130
_RS03310
DZA65_RS03315: DZA65_RS03315 - phosphopentomutase, at 702,220 to 703,443
_RS03315
DZA65_RS03320: DZA65_RS03320 - purine-nucleoside phosphorylase, at 703,543 to 704,268
_RS03320
DZA65_RS03325: DZA65_RS03325 - ATP-grasp domain-containing protein, at 704,391 to 705,629
_RS03325
Position (kb) 702
703
704 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 701.300 kb on + strand, within DZA65_RS03310 at 701.300 kb on + strand, within DZA65_RS03310 at 701.407 kb on + strand, within DZA65_RS03310 at 701.407 kb on + strand, within DZA65_RS03310 at 701.408 kb on - strand, within DZA65_RS03310 at 701.428 kb on + strand, within DZA65_RS03310 at 701.438 kb on + strand, within DZA65_RS03310 at 701.438 kb on + strand, within DZA65_RS03310 at 701.438 kb on + strand, within DZA65_RS03310 at 701.438 kb on + strand, within DZA65_RS03310 at 701.438 kb on + strand, within DZA65_RS03310 at 701.438 kb on + strand, within DZA65_RS03310 at 701.438 kb on + strand, within DZA65_RS03310 at 701.438 kb on + strand, within DZA65_RS03310 at 701.438 kb on + strand, within DZA65_RS03310 at 701.439 kb on - strand, within DZA65_RS03310 at 701.439 kb on - strand, within DZA65_RS03310 at 701.439 kb on - strand, within DZA65_RS03310 at 701.439 kb on - strand, within DZA65_RS03310 at 701.485 kb on + strand, within DZA65_RS03310 at 701.485 kb on + strand, within DZA65_RS03310 at 701.486 kb on - strand, within DZA65_RS03310 at 701.734 kb on - strand, within DZA65_RS03310 at 701.734 kb on - strand, within DZA65_RS03310 at 701.734 kb on - strand, within DZA65_RS03310 at 701.734 kb on - strand, within DZA65_RS03310 at 701.786 kb on + strand, within DZA65_RS03310 at 701.786 kb on + strand, within DZA65_RS03310 at 701.787 kb on - strand, within DZA65_RS03310 at 701.791 kb on + strand, within DZA65_RS03310 at 701.791 kb on + strand, within DZA65_RS03310 at 701.792 kb on - strand, within DZA65_RS03310 at 701.792 kb on - strand, within DZA65_RS03310 at 701.792 kb on - strand, within DZA65_RS03310 at 701.792 kb on - strand, within DZA65_RS03310 at 701.792 kb on - strand, within DZA65_RS03310 at 701.792 kb on - strand, within DZA65_RS03310 at 701.795 kb on + strand, within DZA65_RS03310 at 701.795 kb on + strand, within DZA65_RS03310 at 701.795 kb on + strand, within DZA65_RS03310 at 701.795 kb on + strand, within DZA65_RS03310 at 701.795 kb on + strand, within DZA65_RS03310 at 701.795 kb on + strand, within DZA65_RS03310 at 701.795 kb on + strand, within DZA65_RS03310 at 701.795 kb on + strand, within DZA65_RS03310 at 701.795 kb on + strand, within DZA65_RS03310 at 701.796 kb on - strand, within DZA65_RS03310 at 701.796 kb on - strand, within DZA65_RS03310 at 701.796 kb on - strand, within DZA65_RS03310 at 701.796 kb on - strand, within DZA65_RS03310 at 701.796 kb on - strand, within DZA65_RS03310 at 701.796 kb on - strand, within DZA65_RS03310 at 701.796 kb on - strand, within DZA65_RS03310 at 701.796 kb on - strand, within DZA65_RS03310 at 701.796 kb on - strand, within DZA65_RS03310 at 701.796 kb on - strand, within DZA65_RS03310 at 701.796 kb on - strand, within DZA65_RS03310 at 701.796 kb on - strand, within DZA65_RS03310 at 701.923 kb on + strand, within DZA65_RS03310 at 701.924 kb on - strand, within DZA65_RS03310 at 702.128 kb on + strand at 702.129 kb on - strand at 702.135 kb on - strand at 702.153 kb on + strand at 702.153 kb on + strand at 702.154 kb on - strand at 702.157 kb on + strand at 702.157 kb on + strand at 702.157 kb on + strand at 702.157 kb on + strand at 702.157 kb on + strand at 702.157 kb on + strand at 702.157 kb on + strand at 702.157 kb on + strand at 702.157 kb on + strand at 702.157 kb on + strand at 702.157 kb on + strand at 702.158 kb on - strand at 702.158 kb on - strand at 702.170 kb on + strand at 702.177 kb on + strand at 702.181 kb on + strand at 702.181 kb on + strand at 702.181 kb on + strand at 702.181 kb on + strand at 702.182 kb on - strand at 702.182 kb on - strand at 702.182 kb on - strand at 702.182 kb on - strand at 702.182 kb on - strand at 702.183 kb on + strand at 702.183 kb on + strand at 702.183 kb on + strand at 702.183 kb on + strand at 702.183 kb on + strand at 702.184 kb on - strand at 702.184 kb on - strand at 702.184 kb on - strand at 702.184 kb on - strand at 702.184 kb on - strand at 702.184 kb on - strand at 702.184 kb on - strand at 702.184 kb on - strand at 702.184 kb on - strand at 702.184 kb on - strand at 702.196 kb on - strand at 702.213 kb on + strand at 702.213 kb on + strand at 702.213 kb on + strand at 702.214 kb on - strand at 702.214 kb on - strand at 702.217 kb on + strand at 702.217 kb on + strand at 702.217 kb on + strand at 702.217 kb on + strand at 702.218 kb on - strand at 702.218 kb on - strand at 702.234 kb on + strand at 702.234 kb on + strand at 702.234 kb on + strand at 702.234 kb on + strand at 702.235 kb on - strand at 702.235 kb on - strand at 702.235 kb on - strand at 702.235 kb on - strand at 702.235 kb on - strand at 702.235 kb on - strand at 702.235 kb on - strand at 702.238 kb on - strand at 702.238 kb on - strand at 702.307 kb on - strand at 702.307 kb on - strand at 702.462 kb on + strand, within DZA65_RS03315 at 702.462 kb on + strand, within DZA65_RS03315 at 702.475 kb on + strand, within DZA65_RS03315 at 702.724 kb on + strand, within DZA65_RS03315 at 702.725 kb on - strand, within DZA65_RS03315 at 702.790 kb on + strand, within DZA65_RS03315 at 702.791 kb on - strand, within DZA65_RS03315 at 702.835 kb on + strand, within DZA65_RS03315 at 703.006 kb on - strand, within DZA65_RS03315 at 703.009 kb on + strand, within DZA65_RS03315 at 703.009 kb on + strand, within DZA65_RS03315 at 703.009 kb on + strand, within DZA65_RS03315 at 703.009 kb on + strand, within DZA65_RS03315 at 703.010 kb on - strand, within DZA65_RS03315 at 703.010 kb on - strand, within DZA65_RS03315 at 703.010 kb on - strand, within DZA65_RS03315 at 703.010 kb on - strand, within DZA65_RS03315 at 703.010 kb on - strand, within DZA65_RS03315 at 703.010 kb on - strand, within DZA65_RS03315 at 703.010 kb on - strand, within DZA65_RS03315 at 703.104 kb on + strand, within DZA65_RS03315 at 703.105 kb on - strand, within DZA65_RS03315 at 703.105 kb on - strand, within DZA65_RS03315 at 703.105 kb on - strand, within DZA65_RS03315 at 703.107 kb on + strand, within DZA65_RS03315 at 703.107 kb on + strand, within DZA65_RS03315 at 703.338 kb on + strand at 703.465 kb on - strand at 703.492 kb on - strand at 703.493 kb on + strand at 703.493 kb on + strand at 703.493 kb on + strand at 703.495 kb on + strand at 703.495 kb on + strand at 703.495 kb on + strand at 703.495 kb on + strand at 703.495 kb on + strand at 703.495 kb on + strand at 703.495 kb on + strand at 703.495 kb on + strand at 703.496 kb on - strand at 703.496 kb on - strand at 703.496 kb on - strand at 703.548 kb on + strand at 703.549 kb on - strand at 703.557 kb on + strand at 703.557 kb on + strand at 703.557 kb on + strand at 703.557 kb on + strand at 703.557 kb on + strand at 703.557 kb on + strand at 703.557 kb on + strand at 703.557 kb on + strand at 703.558 kb on - strand at 703.558 kb on - strand at 703.624 kb on + strand, within DZA65_RS03320 at 703.625 kb on - strand, within DZA65_RS03320 at 703.625 kb on - strand, within DZA65_RS03320 at 703.625 kb on - strand, within DZA65_RS03320 at 703.700 kb on - strand, within DZA65_RS03320 at 703.759 kb on + strand, within DZA65_RS03320 at 703.759 kb on + strand, within DZA65_RS03320 at 704.023 kb on + strand, within DZA65_RS03320 at 704.024 kb on - strand, within DZA65_RS03320 at 704.024 kb on - strand, within DZA65_RS03320 at 704.062 kb on + strand, within DZA65_RS03320 at 704.101 kb on + strand, within DZA65_RS03320 at 704.102 kb on - strand, within DZA65_RS03320 at 704.128 kb on - strand, within DZA65_RS03320 at 704.309 kb on + strand at 704.309 kb on + strand at 704.310 kb on - strand at 704.364 kb on + strand at 704.373 kb on + strand at 704.374 kb on - strand at 704.377 kb on + strand at 704.397 kb on + strand at 704.398 kb on - strand at 704.437 kb on + strand at 704.437 kb on + strand at 704.438 kb on - strand at 704.438 kb on - strand at 704.438 kb on - strand at 704.438 kb on - strand at 704.438 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 701,300 + DZA65_RS03310 0.38 -0.6 701,300 + DZA65_RS03310 0.38 +0.1 701,407 + DZA65_RS03310 0.46 +0.2 701,407 + DZA65_RS03310 0.46 +1.4 701,408 - DZA65_RS03310 0.46 -0.8 701,428 + DZA65_RS03310 0.47 -0.2 701,438 + DZA65_RS03310 0.48 +0.2 701,438 + DZA65_RS03310 0.48 +0.1 701,438 + DZA65_RS03310 0.48 -0.2 701,438 + DZA65_RS03310 0.48 -0.1 701,438 + DZA65_RS03310 0.48 -0.5 701,438 + DZA65_RS03310 0.48 -0.7 701,438 + DZA65_RS03310 0.48 +0.2 701,438 + DZA65_RS03310 0.48 -1.4 701,438 + DZA65_RS03310 0.48 +0.4 701,439 - DZA65_RS03310 0.48 -0.7 701,439 - DZA65_RS03310 0.48 -0.5 701,439 - DZA65_RS03310 0.48 -1.5 701,439 - DZA65_RS03310 0.48 -0.4 701,485 + DZA65_RS03310 0.52 +1.1 701,485 + DZA65_RS03310 0.52 +0.9 701,486 - DZA65_RS03310 0.52 +0.2 701,734 - DZA65_RS03310 0.70 -0.2 701,734 - DZA65_RS03310 0.70 +1.4 701,734 - DZA65_RS03310 0.70 +0.2 701,734 - DZA65_RS03310 0.70 -2.6 701,786 + DZA65_RS03310 0.74 +0.5 701,786 + DZA65_RS03310 0.74 -0.1 701,787 - DZA65_RS03310 0.74 +0.2 701,791 + DZA65_RS03310 0.74 +0.6 701,791 + DZA65_RS03310 0.74 -1.8 701,792 - DZA65_RS03310 0.75 -2.3 701,792 - DZA65_RS03310 0.75 -0.6 701,792 - DZA65_RS03310 0.75 +0.8 701,792 - DZA65_RS03310 0.75 -1.6 701,792 - DZA65_RS03310 0.75 -1.1 701,792 - DZA65_RS03310 0.75 -1.1 701,795 + DZA65_RS03310 0.75 +0.3 701,795 + DZA65_RS03310 0.75 +0.1 701,795 + DZA65_RS03310 0.75 +0.1 701,795 + DZA65_RS03310 0.75 -0.5 701,795 + DZA65_RS03310 0.75 -0.0 701,795 + DZA65_RS03310 0.75 +1.1 701,795 + DZA65_RS03310 0.75 -0.2 701,795 + DZA65_RS03310 0.75 -0.6 701,795 + DZA65_RS03310 0.75 -1.3 701,796 - DZA65_RS03310 0.75 -1.1 701,796 - DZA65_RS03310 0.75 +1.1 701,796 - DZA65_RS03310 0.75 +0.1 701,796 - DZA65_RS03310 0.75 +0.4 701,796 - DZA65_RS03310 0.75 -0.1 701,796 - DZA65_RS03310 0.75 -0.3 701,796 - DZA65_RS03310 0.75 +0.4 701,796 - DZA65_RS03310 0.75 -0.0 701,796 - DZA65_RS03310 0.75 -0.9 701,796 - DZA65_RS03310 0.75 -0.7 701,796 - DZA65_RS03310 0.75 -0.3 701,796 - DZA65_RS03310 0.75 -0.3 701,923 + DZA65_RS03310 0.84 -0.6 701,924 - DZA65_RS03310 0.84 -0.7 702,128 + +0.2 702,129 - -0.4 702,135 - +0.1 702,153 + +0.1 702,153 + +0.7 702,154 - +1.1 702,157 + -0.6 702,157 + -0.2 702,157 + -0.3 702,157 + -0.9 702,157 + -0.8 702,157 + -0.3 702,157 + -0.5 702,157 + +0.1 702,157 + +0.6 702,157 + -0.7 702,157 + +0.7 702,158 - -0.1 702,158 - -1.6 702,170 + +0.4 702,177 + +0.0 702,181 + -1.4 702,181 + +0.2 702,181 + +1.1 702,181 + +0.4 702,182 - -0.9 702,182 - -0.7 702,182 - -1.4 702,182 - +0.4 702,182 - -0.4 702,183 + -1.2 702,183 + +0.8 702,183 + +0.5 702,183 + -0.2 702,183 + +0.4 702,184 - -0.4 702,184 - +0.0 702,184 - +0.5 702,184 - +1.0 702,184 - -1.4 702,184 - -0.3 702,184 - +0.7 702,184 - -0.5 702,184 - +0.2 702,184 - -0.3 702,196 - +0.7 702,213 + -0.2 702,213 + -0.5 702,213 + -0.5 702,214 - +0.9 702,214 - +0.0 702,217 + -0.2 702,217 + -0.4 702,217 + -0.6 702,217 + -1.6 702,218 - -1.5 702,218 - +0.3 702,234 + -0.7 702,234 + -0.4 702,234 + -0.8 702,234 + -0.8 702,235 - -0.3 702,235 - +0.2 702,235 - -1.2 702,235 - -1.2 702,235 - -0.3 702,235 - -1.2 702,235 - -2.5 702,238 - +0.0 702,238 - -0.3 702,307 - -0.8 702,307 - +0.5 702,462 + DZA65_RS03315 0.20 -1.1 702,462 + DZA65_RS03315 0.20 -0.8 702,475 + DZA65_RS03315 0.21 -0.7 702,724 + DZA65_RS03315 0.41 +0.1 702,725 - DZA65_RS03315 0.41 -0.6 702,790 + DZA65_RS03315 0.47 -0.2 702,791 - DZA65_RS03315 0.47 -0.7 702,835 + DZA65_RS03315 0.50 -0.4 703,006 - DZA65_RS03315 0.64 -0.2 703,009 + DZA65_RS03315 0.64 -0.1 703,009 + DZA65_RS03315 0.64 -1.6 703,009 + DZA65_RS03315 0.64 -0.5 703,009 + DZA65_RS03315 0.64 -0.9 703,010 - DZA65_RS03315 0.65 -0.5 703,010 - DZA65_RS03315 0.65 -1.3 703,010 - DZA65_RS03315 0.65 -0.9 703,010 - DZA65_RS03315 0.65 -1.6 703,010 - DZA65_RS03315 0.65 +0.4 703,010 - DZA65_RS03315 0.65 -0.1 703,010 - DZA65_RS03315 0.65 +0.7 703,104 + DZA65_RS03315 0.72 -1.7 703,105 - DZA65_RS03315 0.72 +0.3 703,105 - DZA65_RS03315 0.72 -0.7 703,105 - DZA65_RS03315 0.72 -0.2 703,107 + DZA65_RS03315 0.72 -0.3 703,107 + DZA65_RS03315 0.72 -0.5 703,338 + -0.1 703,465 - +0.1 703,492 - -3.0 703,493 + +0.5 703,493 + +0.4 703,493 + -0.0 703,495 + -0.6 703,495 + -0.1 703,495 + -0.2 703,495 + -0.5 703,495 + -1.3 703,495 + +0.2 703,495 + -0.2 703,495 + -1.3 703,496 - -0.9 703,496 - +0.9 703,496 - +0.1 703,548 + +0.2 703,549 - -0.1 703,557 + -1.1 703,557 + +0.1 703,557 + -0.5 703,557 + -1.2 703,557 + +0.5 703,557 + -0.6 703,557 + -0.8 703,557 + +0.4 703,558 - -0.4 703,558 - +0.7 703,624 + DZA65_RS03320 0.11 -1.8 703,625 - DZA65_RS03320 0.11 -1.0 703,625 - DZA65_RS03320 0.11 -1.9 703,625 - DZA65_RS03320 0.11 -1.4 703,700 - DZA65_RS03320 0.22 -1.8 703,759 + DZA65_RS03320 0.30 +1.4 703,759 + DZA65_RS03320 0.30 -0.8 704,023 + DZA65_RS03320 0.66 -1.4 704,024 - DZA65_RS03320 0.66 +1.2 704,024 - DZA65_RS03320 0.66 +0.4 704,062 + DZA65_RS03320 0.71 +0.2 704,101 + DZA65_RS03320 0.77 -0.5 704,102 - DZA65_RS03320 0.77 -0.4 704,128 - DZA65_RS03320 0.81 -1.6 704,309 + -0.1 704,309 + -0.5 704,310 - -0.3 704,364 + -1.2 704,373 + -0.2 704,374 - +0.8 704,377 + +0.8 704,397 + -1.9 704,398 - -0.2 704,437 + -0.3 704,437 + -1.6 704,438 - +0.8 704,438 - -0.8 704,438 - -1.3 704,438 - -0.0 704,438 - +0.7
Or see this region's nucleotide sequence