Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS02855 and DZA65_RS02860 are separated by 188 nucleotides DZA65_RS02860 and DZA65_RS02865 are separated by 49 nucleotides
DZA65_RS02855: DZA65_RS02855 - FxsA family protein, at 613,544 to 614,047
_RS02855
DZA65_RS02860: DZA65_RS02860 - co-chaperone GroES, at 614,236 to 614,529
_RS02860
DZA65_RS02865: DZA65_RS02865 - chaperonin GroEL, at 614,579 to 616,225
_RS02865
Position (kb) 614
615 Strain fitness (log2 ratio) -2
-1
0
1
2 at 613.249 kb on + strand at 613.250 kb on - strand at 613.250 kb on - strand at 613.250 kb on - strand at 613.321 kb on + strand at 613.321 kb on + strand at 613.321 kb on + strand at 613.321 kb on + strand at 613.322 kb on - strand at 613.322 kb on - strand at 613.356 kb on + strand at 613.356 kb on + strand at 613.357 kb on - strand at 613.357 kb on - strand at 613.357 kb on - strand at 613.370 kb on + strand at 613.371 kb on - strand at 613.384 kb on + strand at 613.384 kb on + strand at 613.384 kb on + strand at 613.384 kb on + strand at 613.384 kb on + strand at 613.385 kb on - strand at 613.385 kb on - strand at 613.386 kb on + strand at 613.386 kb on + strand at 613.386 kb on + strand at 613.386 kb on + strand at 613.386 kb on + strand at 613.386 kb on + strand at 613.387 kb on - strand at 613.387 kb on - strand at 613.387 kb on - strand at 613.387 kb on - strand at 613.387 kb on - strand at 613.387 kb on - strand at 613.387 kb on - strand at 613.387 kb on - strand at 613.387 kb on - strand at 613.390 kb on + strand at 613.390 kb on + strand at 613.390 kb on + strand at 613.390 kb on + strand at 613.390 kb on + strand at 613.390 kb on + strand at 613.391 kb on - strand at 613.391 kb on - strand at 613.391 kb on - strand at 613.391 kb on - strand at 613.391 kb on - strand at 613.407 kb on + strand at 613.408 kb on - strand at 613.409 kb on + strand at 613.409 kb on + strand at 613.410 kb on - strand at 613.410 kb on - strand at 613.410 kb on - strand at 613.410 kb on - strand at 613.410 kb on - strand at 613.414 kb on + strand at 613.414 kb on + strand at 613.415 kb on - strand at 613.419 kb on + strand at 613.419 kb on + strand at 613.419 kb on + strand at 613.419 kb on + strand at 613.420 kb on - strand at 613.420 kb on - strand at 613.420 kb on - strand at 613.420 kb on - strand at 613.437 kb on + strand at 613.437 kb on + strand at 613.437 kb on + strand at 613.438 kb on - strand at 613.438 kb on - strand at 613.438 kb on - strand at 613.438 kb on - strand at 613.445 kb on + strand at 613.445 kb on + strand at 613.446 kb on - strand at 613.471 kb on + strand at 613.478 kb on + strand at 613.499 kb on - strand at 613.509 kb on - strand at 613.509 kb on - strand at 613.520 kb on - strand at 613.524 kb on - strand at 613.524 kb on - strand at 613.583 kb on + strand at 613.583 kb on + strand at 613.597 kb on + strand, within DZA65_RS02855 at 613.598 kb on - strand, within DZA65_RS02855 at 613.678 kb on + strand, within DZA65_RS02855 at 613.678 kb on + strand, within DZA65_RS02855 at 613.678 kb on + strand, within DZA65_RS02855 at 613.678 kb on + strand, within DZA65_RS02855 at 613.678 kb on + strand, within DZA65_RS02855 at 613.678 kb on + strand, within DZA65_RS02855 at 613.678 kb on + strand, within DZA65_RS02855 at 613.679 kb on - strand, within DZA65_RS02855 at 613.679 kb on - strand, within DZA65_RS02855 at 613.679 kb on - strand, within DZA65_RS02855 at 613.679 kb on - strand, within DZA65_RS02855 at 613.683 kb on + strand, within DZA65_RS02855 at 613.683 kb on + strand, within DZA65_RS02855 at 613.683 kb on + strand, within DZA65_RS02855 at 613.683 kb on + strand, within DZA65_RS02855 at 613.683 kb on + strand, within DZA65_RS02855 at 613.683 kb on + strand, within DZA65_RS02855 at 613.683 kb on + strand, within DZA65_RS02855 at 613.683 kb on + strand, within DZA65_RS02855 at 613.683 kb on + strand, within DZA65_RS02855 at 613.684 kb on - strand, within DZA65_RS02855 at 613.684 kb on - strand, within DZA65_RS02855 at 613.684 kb on - strand, within DZA65_RS02855 at 613.684 kb on - strand, within DZA65_RS02855 at 613.684 kb on - strand, within DZA65_RS02855 at 613.687 kb on + strand, within DZA65_RS02855 at 613.687 kb on + strand, within DZA65_RS02855 at 613.688 kb on - strand, within DZA65_RS02855 at 613.763 kb on - strand, within DZA65_RS02855 at 613.776 kb on + strand, within DZA65_RS02855 at 613.791 kb on + strand, within DZA65_RS02855 at 613.792 kb on - strand, within DZA65_RS02855 at 613.792 kb on - strand, within DZA65_RS02855 at 613.792 kb on - strand, within DZA65_RS02855 at 614.100 kb on + strand at 614.100 kb on + strand at 614.100 kb on + strand at 614.101 kb on - strand at 614.154 kb on + strand at 614.154 kb on + strand at 614.154 kb on + strand at 614.154 kb on + strand at 614.154 kb on + strand at 614.154 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 613,249 + -0.5 613,250 - -0.1 613,250 - +0.4 613,250 - -1.7 613,321 + -0.5 613,321 + +0.5 613,321 + +1.0 613,321 + +0.8 613,322 - -0.5 613,322 - +0.5 613,356 + -0.8 613,356 + -0.1 613,357 - -0.8 613,357 - -1.6 613,357 - +0.7 613,370 + -1.2 613,371 - +1.1 613,384 + +0.2 613,384 + -1.3 613,384 + +0.9 613,384 + +0.3 613,384 + -0.1 613,385 - +0.1 613,385 - +0.4 613,386 + +0.7 613,386 + -1.2 613,386 + +0.2 613,386 + -1.2 613,386 + -1.2 613,386 + +1.2 613,387 - -0.0 613,387 - -1.1 613,387 - -0.1 613,387 - -0.5 613,387 - +0.5 613,387 - -0.6 613,387 - +0.4 613,387 - -0.9 613,387 - +0.4 613,390 + -0.2 613,390 + +1.4 613,390 + +1.0 613,390 + -0.9 613,390 + +0.1 613,390 + -0.6 613,391 - -0.6 613,391 - +0.2 613,391 - -0.9 613,391 - -1.5 613,391 - -0.1 613,407 + -1.3 613,408 - -1.2 613,409 + -1.7 613,409 + +1.1 613,410 - -0.7 613,410 - -0.1 613,410 - -1.7 613,410 - -0.4 613,410 - -0.4 613,414 + +0.3 613,414 + -0.9 613,415 - -0.2 613,419 + +0.2 613,419 + -0.0 613,419 + -1.5 613,419 + -0.2 613,420 - -2.3 613,420 - +0.2 613,420 - -1.2 613,420 - +0.8 613,437 + -0.9 613,437 + -0.7 613,437 + -1.0 613,438 - -0.4 613,438 - +0.4 613,438 - +0.5 613,438 - -2.2 613,445 + -0.2 613,445 + +0.4 613,446 - +0.0 613,471 + -1.7 613,478 + +0.7 613,499 - -0.6 613,509 - -0.9 613,509 - -0.5 613,520 - -0.2 613,524 - +0.7 613,524 - +0.1 613,583 + +0.7 613,583 + +0.7 613,597 + DZA65_RS02855 0.11 -0.5 613,598 - DZA65_RS02855 0.11 +1.2 613,678 + DZA65_RS02855 0.27 -0.6 613,678 + DZA65_RS02855 0.27 -1.5 613,678 + DZA65_RS02855 0.27 -0.8 613,678 + DZA65_RS02855 0.27 -1.7 613,678 + DZA65_RS02855 0.27 +0.5 613,678 + DZA65_RS02855 0.27 +0.6 613,678 + DZA65_RS02855 0.27 -0.6 613,679 - DZA65_RS02855 0.27 +1.6 613,679 - DZA65_RS02855 0.27 -1.0 613,679 - DZA65_RS02855 0.27 +1.0 613,679 - DZA65_RS02855 0.27 -0.3 613,683 + DZA65_RS02855 0.28 +0.9 613,683 + DZA65_RS02855 0.28 -0.8 613,683 + DZA65_RS02855 0.28 -0.7 613,683 + DZA65_RS02855 0.28 -0.1 613,683 + DZA65_RS02855 0.28 +0.4 613,683 + DZA65_RS02855 0.28 -0.2 613,683 + DZA65_RS02855 0.28 -0.5 613,683 + DZA65_RS02855 0.28 +1.2 613,683 + DZA65_RS02855 0.28 +0.2 613,684 - DZA65_RS02855 0.28 +0.4 613,684 - DZA65_RS02855 0.28 -0.2 613,684 - DZA65_RS02855 0.28 -1.2 613,684 - DZA65_RS02855 0.28 +0.3 613,684 - DZA65_RS02855 0.28 -0.3 613,687 + DZA65_RS02855 0.28 -2.0 613,687 + DZA65_RS02855 0.28 -1.2 613,688 - DZA65_RS02855 0.29 +0.1 613,763 - DZA65_RS02855 0.43 +0.6 613,776 + DZA65_RS02855 0.46 +0.5 613,791 + DZA65_RS02855 0.49 -1.6 613,792 - DZA65_RS02855 0.49 +0.8 613,792 - DZA65_RS02855 0.49 -0.2 613,792 - DZA65_RS02855 0.49 +0.0 614,100 + +1.2 614,100 + -1.0 614,100 + +0.8 614,101 - +0.5 614,154 + +2.1 614,154 + -0.3 614,154 + -0.3 614,154 + +0.2 614,154 + +0.7 614,154 + +0.2
Or see this region's nucleotide sequence