Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS01420 and DZA65_RS01425 are separated by 24 nucleotides DZA65_RS01425 and DZA65_RS01430 overlap by 11 nucleotides DZA65_RS01430 and DZA65_RS01435 are separated by 109 nucleotides
DZA65_RS01420: DZA65_RS01420 - rod shape-determining protein MreD, at 312,824 to 313,312
_RS01420
DZA65_RS01425: DZA65_RS01425 - septum formation inhibitor Maf, at 313,337 to 313,930
_RS01425
DZA65_RS01430: DZA65_RS01430 - ribonuclease G, at 313,920 to 315,389
_RS01430
DZA65_RS01435: DZA65_RS01435 - AsmA2 domain-containing protein, at 315,499 to 319,335
_RS01435
Position (kb) 313
314
315
316 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 313.310 kb on + strand at 313.310 kb on + strand at 313.310 kb on + strand at 313.310 kb on + strand at 313.311 kb on - strand at 313.311 kb on - strand at 313.313 kb on + strand at 313.314 kb on - strand at 313.314 kb on - strand at 313.324 kb on + strand at 313.325 kb on - strand at 313.349 kb on + strand at 313.349 kb on + strand at 313.350 kb on - strand at 313.350 kb on - strand at 313.466 kb on + strand, within DZA65_RS01425 at 313.466 kb on + strand, within DZA65_RS01425 at 313.466 kb on + strand, within DZA65_RS01425 at 313.466 kb on + strand, within DZA65_RS01425 at 313.466 kb on + strand, within DZA65_RS01425 at 313.466 kb on + strand, within DZA65_RS01425 at 313.467 kb on - strand, within DZA65_RS01425 at 313.467 kb on - strand, within DZA65_RS01425 at 313.467 kb on - strand, within DZA65_RS01425 at 313.467 kb on - strand, within DZA65_RS01425 at 313.467 kb on - strand, within DZA65_RS01425 at 313.467 kb on - strand, within DZA65_RS01425 at 313.707 kb on + strand, within DZA65_RS01425 at 313.708 kb on - strand, within DZA65_RS01425 at 313.708 kb on - strand, within DZA65_RS01425 at 313.738 kb on + strand, within DZA65_RS01425 at 313.745 kb on + strand, within DZA65_RS01425 at 313.745 kb on + strand, within DZA65_RS01425 at 313.745 kb on + strand, within DZA65_RS01425 at 313.745 kb on + strand, within DZA65_RS01425 at 313.745 kb on + strand, within DZA65_RS01425 at 313.745 kb on + strand, within DZA65_RS01425 at 313.745 kb on + strand, within DZA65_RS01425 at 313.745 kb on + strand, within DZA65_RS01425 at 313.745 kb on + strand, within DZA65_RS01425 at 313.745 kb on + strand, within DZA65_RS01425 at 313.745 kb on + strand, within DZA65_RS01425 at 313.745 kb on + strand, within DZA65_RS01425 at 313.745 kb on + strand, within DZA65_RS01425 at 313.745 kb on + strand, within DZA65_RS01425 at 313.745 kb on + strand, within DZA65_RS01425 at 313.745 kb on + strand, within DZA65_RS01425 at 313.746 kb on - strand at 313.746 kb on - strand, within DZA65_RS01425 at 313.746 kb on - strand, within DZA65_RS01425 at 313.746 kb on - strand, within DZA65_RS01425 at 313.746 kb on - strand, within DZA65_RS01425 at 313.746 kb on - strand, within DZA65_RS01425 at 313.746 kb on - strand, within DZA65_RS01425 at 313.746 kb on - strand, within DZA65_RS01425 at 313.746 kb on - strand, within DZA65_RS01425 at 313.746 kb on - strand, within DZA65_RS01425 at 313.746 kb on - strand, within DZA65_RS01425 at 313.746 kb on - strand, within DZA65_RS01425 at 313.746 kb on - strand, within DZA65_RS01425 at 313.746 kb on - strand, within DZA65_RS01425 at 313.784 kb on + strand, within DZA65_RS01425 at 313.835 kb on + strand, within DZA65_RS01425 at 313.835 kb on + strand, within DZA65_RS01425 at 313.835 kb on + strand, within DZA65_RS01425 at 313.835 kb on + strand, within DZA65_RS01425 at 313.836 kb on - strand at 313.836 kb on - strand, within DZA65_RS01425 at 313.904 kb on - strand at 313.971 kb on + strand at 314.040 kb on - strand at 314.043 kb on + strand at 314.043 kb on + strand at 314.147 kb on + strand, within DZA65_RS01430 at 314.304 kb on + strand, within DZA65_RS01430 at 314.352 kb on - strand, within DZA65_RS01430 at 314.423 kb on + strand, within DZA65_RS01430 at 314.424 kb on - strand, within DZA65_RS01430 at 314.424 kb on - strand, within DZA65_RS01430 at 314.634 kb on + strand, within DZA65_RS01430 at 314.634 kb on + strand, within DZA65_RS01430 at 314.635 kb on - strand, within DZA65_RS01430 at 314.635 kb on - strand, within DZA65_RS01430 at 314.664 kb on + strand, within DZA65_RS01430 at 314.697 kb on + strand, within DZA65_RS01430 at 314.697 kb on + strand, within DZA65_RS01430 at 314.698 kb on - strand, within DZA65_RS01430 at 315.022 kb on + strand, within DZA65_RS01430 at 315.109 kb on + strand, within DZA65_RS01430 at 315.109 kb on + strand, within DZA65_RS01430 at 315.109 kb on + strand, within DZA65_RS01430 at 315.110 kb on - strand at 315.110 kb on - strand, within DZA65_RS01430 at 315.110 kb on - strand, within DZA65_RS01430 at 315.110 kb on - strand, within DZA65_RS01430 at 315.183 kb on + strand, within DZA65_RS01430 at 315.183 kb on + strand, within DZA65_RS01430 at 315.222 kb on + strand, within DZA65_RS01430 at 315.222 kb on + strand, within DZA65_RS01430 at 315.222 kb on + strand, within DZA65_RS01430 at 315.222 kb on + strand, within DZA65_RS01430 at 315.222 kb on + strand, within DZA65_RS01430 at 315.223 kb on - strand, within DZA65_RS01430 at 315.246 kb on + strand at 315.247 kb on - strand at 315.247 kb on - strand at 315.355 kb on - strand at 315.355 kb on - strand at 315.355 kb on - strand at 315.387 kb on + strand at 315.387 kb on + strand at 315.387 kb on + strand at 315.387 kb on + strand at 315.387 kb on + strand at 315.387 kb on + strand at 315.388 kb on - strand at 315.388 kb on - strand at 315.388 kb on - strand at 315.388 kb on - strand at 315.388 kb on - strand at 315.388 kb on - strand at 315.388 kb on - strand at 315.388 kb on - strand at 315.388 kb on - strand at 315.388 kb on - strand at 315.388 kb on - strand at 315.388 kb on - strand at 315.388 kb on - strand at 315.388 kb on - strand at 315.436 kb on + strand at 315.437 kb on - strand at 315.437 kb on - strand at 315.500 kb on + strand at 315.500 kb on + strand at 315.518 kb on + strand at 315.518 kb on + strand at 315.518 kb on + strand at 315.529 kb on - strand at 315.600 kb on + strand at 315.600 kb on + strand at 315.601 kb on - strand at 315.601 kb on - strand at 315.721 kb on - strand at 315.756 kb on + strand at 315.756 kb on + strand at 315.756 kb on + strand at 315.827 kb on - strand at 315.839 kb on + strand at 315.839 kb on + strand at 315.839 kb on + strand at 315.840 kb on - strand at 315.840 kb on - strand at 316.054 kb on - strand, within DZA65_RS01435 at 316.145 kb on - strand, within DZA65_RS01435 at 316.263 kb on + strand, within DZA65_RS01435 at 316.263 kb on + strand, within DZA65_RS01435 at 316.264 kb on - strand, within DZA65_RS01435 at 316.264 kb on - strand, within DZA65_RS01435 at 316.264 kb on - strand, within DZA65_RS01435 at 316.264 kb on - strand, within DZA65_RS01435 at 316.265 kb on + strand, within DZA65_RS01435 at 316.265 kb on + strand, within DZA65_RS01435 at 316.265 kb on + strand, within DZA65_RS01435 at 316.265 kb on + strand, within DZA65_RS01435 at 316.265 kb on + strand, within DZA65_RS01435 at 316.265 kb on + strand, within DZA65_RS01435 at 316.265 kb on + strand, within DZA65_RS01435 at 316.265 kb on + strand, within DZA65_RS01435 at 316.265 kb on + strand, within DZA65_RS01435 at 316.265 kb on + strand, within DZA65_RS01435 at 316.266 kb on - strand, within DZA65_RS01435 at 316.266 kb on - strand, within DZA65_RS01435 at 316.266 kb on - strand, within DZA65_RS01435 at 316.266 kb on - strand, within DZA65_RS01435 at 316.266 kb on - strand, within DZA65_RS01435 at 316.266 kb on - strand, within DZA65_RS01435 at 316.267 kb on + strand, within DZA65_RS01435 at 316.267 kb on + strand, within DZA65_RS01435 at 316.267 kb on + strand, within DZA65_RS01435 at 316.267 kb on + strand, within DZA65_RS01435 at 316.268 kb on - strand, within DZA65_RS01435 at 316.268 kb on - strand, within DZA65_RS01435 at 316.268 kb on - strand, within DZA65_RS01435 at 316.268 kb on - strand, within DZA65_RS01435
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 313,310 + +0.5 313,310 + -0.6 313,310 + -1.6 313,310 + -0.8 313,311 - +0.2 313,311 - -1.0 313,313 + -1.1 313,314 - -1.0 313,314 - -0.5 313,324 + -1.3 313,325 - -0.0 313,349 + -0.4 313,349 + -0.5 313,350 - -0.3 313,350 - +0.8 313,466 + DZA65_RS01425 0.22 +0.3 313,466 + DZA65_RS01425 0.22 +0.3 313,466 + DZA65_RS01425 0.22 +0.0 313,466 + DZA65_RS01425 0.22 +0.4 313,466 + DZA65_RS01425 0.22 -0.3 313,466 + DZA65_RS01425 0.22 -0.2 313,467 - DZA65_RS01425 0.22 -0.6 313,467 - DZA65_RS01425 0.22 -0.9 313,467 - DZA65_RS01425 0.22 -0.5 313,467 - DZA65_RS01425 0.22 -1.3 313,467 - DZA65_RS01425 0.22 -0.5 313,467 - DZA65_RS01425 0.22 +0.5 313,707 + DZA65_RS01425 0.62 -1.2 313,708 - DZA65_RS01425 0.62 +1.2 313,708 - DZA65_RS01425 0.62 -1.9 313,738 + DZA65_RS01425 0.68 -0.3 313,745 + DZA65_RS01425 0.69 -1.5 313,745 + DZA65_RS01425 0.69 -1.2 313,745 + DZA65_RS01425 0.69 -0.5 313,745 + DZA65_RS01425 0.69 -0.5 313,745 + DZA65_RS01425 0.69 -0.3 313,745 + DZA65_RS01425 0.69 -0.3 313,745 + DZA65_RS01425 0.69 -0.4 313,745 + DZA65_RS01425 0.69 +0.2 313,745 + DZA65_RS01425 0.69 +0.4 313,745 + DZA65_RS01425 0.69 -1.0 313,745 + DZA65_RS01425 0.69 -0.8 313,745 + DZA65_RS01425 0.69 -1.0 313,745 + DZA65_RS01425 0.69 -1.0 313,745 + DZA65_RS01425 0.69 +1.1 313,745 + DZA65_RS01425 0.69 -1.2 313,745 + DZA65_RS01425 0.69 +0.5 313,746 - +3.1 313,746 - DZA65_RS01425 0.69 +0.5 313,746 - DZA65_RS01425 0.69 -0.3 313,746 - DZA65_RS01425 0.69 -0.5 313,746 - DZA65_RS01425 0.69 +0.6 313,746 - DZA65_RS01425 0.69 -1.2 313,746 - DZA65_RS01425 0.69 -1.8 313,746 - DZA65_RS01425 0.69 +0.0 313,746 - DZA65_RS01425 0.69 +0.6 313,746 - DZA65_RS01425 0.69 +0.5 313,746 - DZA65_RS01425 0.69 -1.3 313,746 - DZA65_RS01425 0.69 +0.2 313,746 - DZA65_RS01425 0.69 +1.2 313,746 - DZA65_RS01425 0.69 -0.5 313,784 + DZA65_RS01425 0.75 +0.1 313,835 + DZA65_RS01425 0.84 +0.0 313,835 + DZA65_RS01425 0.84 -1.2 313,835 + DZA65_RS01425 0.84 -1.8 313,835 + DZA65_RS01425 0.84 +0.7 313,836 - -0.0 313,836 - DZA65_RS01425 0.84 -0.0 313,904 - -1.1 313,971 + -2.7 314,040 - -0.8 314,043 + +0.2 314,043 + -0.2 314,147 + DZA65_RS01430 0.15 -0.2 314,304 + DZA65_RS01430 0.26 -0.5 314,352 - DZA65_RS01430 0.29 -1.3 314,423 + DZA65_RS01430 0.34 -1.9 314,424 - DZA65_RS01430 0.34 -1.2 314,424 - DZA65_RS01430 0.34 +1.1 314,634 + DZA65_RS01430 0.49 -2.0 314,634 + DZA65_RS01430 0.49 +1.2 314,635 - DZA65_RS01430 0.49 -1.6 314,635 - DZA65_RS01430 0.49 +1.0 314,664 + DZA65_RS01430 0.51 +0.7 314,697 + DZA65_RS01430 0.53 -1.5 314,697 + DZA65_RS01430 0.53 -1.9 314,698 - DZA65_RS01430 0.53 -1.9 315,022 + DZA65_RS01430 0.75 -1.7 315,109 + DZA65_RS01430 0.81 +0.9 315,109 + DZA65_RS01430 0.81 -2.3 315,109 + DZA65_RS01430 0.81 +0.5 315,110 - -0.5 315,110 - DZA65_RS01430 0.81 +0.9 315,110 - DZA65_RS01430 0.81 -1.8 315,110 - DZA65_RS01430 0.81 +0.1 315,183 + DZA65_RS01430 0.86 -1.6 315,183 + DZA65_RS01430 0.86 -1.3 315,222 + DZA65_RS01430 0.89 +0.5 315,222 + DZA65_RS01430 0.89 -1.3 315,222 + DZA65_RS01430 0.89 -1.0 315,222 + DZA65_RS01430 0.89 -0.3 315,222 + DZA65_RS01430 0.89 -0.3 315,223 - DZA65_RS01430 0.89 -0.0 315,246 + -1.0 315,247 - -0.3 315,247 - +0.1 315,355 - -1.5 315,355 - -0.5 315,355 - -0.3 315,387 + -1.9 315,387 + +0.2 315,387 + -1.7 315,387 + -0.4 315,387 + -0.1 315,387 + +1.0 315,388 - +0.8 315,388 - +0.4 315,388 - +2.5 315,388 - -0.3 315,388 - +1.5 315,388 - -2.8 315,388 - -1.6 315,388 - -1.0 315,388 - -0.0 315,388 - -0.9 315,388 - -1.3 315,388 - -0.5 315,388 - -0.0 315,388 - -0.5 315,436 + -0.4 315,437 - -1.3 315,437 - -0.9 315,500 + -1.5 315,500 + -2.0 315,518 + +0.3 315,518 + -1.0 315,518 + -0.5 315,529 - +0.2 315,600 + +1.0 315,600 + -2.0 315,601 - +0.3 315,601 - -0.2 315,721 - -0.6 315,756 + +1.5 315,756 + -1.5 315,756 + +1.0 315,827 - -0.8 315,839 + -0.8 315,839 + +0.5 315,839 + +0.8 315,840 - +0.2 315,840 - -1.3 316,054 - DZA65_RS01435 0.14 +1.4 316,145 - DZA65_RS01435 0.17 -1.6 316,263 + DZA65_RS01435 0.20 +0.1 316,263 + DZA65_RS01435 0.20 -0.5 316,264 - DZA65_RS01435 0.20 -0.3 316,264 - DZA65_RS01435 0.20 +1.5 316,264 - DZA65_RS01435 0.20 +0.3 316,264 - DZA65_RS01435 0.20 -1.0 316,265 + DZA65_RS01435 0.20 +0.2 316,265 + DZA65_RS01435 0.20 +0.4 316,265 + DZA65_RS01435 0.20 -0.2 316,265 + DZA65_RS01435 0.20 -0.5 316,265 + DZA65_RS01435 0.20 -0.0 316,265 + DZA65_RS01435 0.20 +0.2 316,265 + DZA65_RS01435 0.20 -0.5 316,265 + DZA65_RS01435 0.20 -0.8 316,265 + DZA65_RS01435 0.20 -0.3 316,265 + DZA65_RS01435 0.20 +1.0 316,266 - DZA65_RS01435 0.20 -0.2 316,266 - DZA65_RS01435 0.20 -0.0 316,266 - DZA65_RS01435 0.20 -1.7 316,266 - DZA65_RS01435 0.20 -1.8 316,266 - DZA65_RS01435 0.20 +0.6 316,266 - DZA65_RS01435 0.20 -1.6 316,267 + DZA65_RS01435 0.20 -0.3 316,267 + DZA65_RS01435 0.20 -0.0 316,267 + DZA65_RS01435 0.20 -0.5 316,267 + DZA65_RS01435 0.20 +0.2 316,268 - DZA65_RS01435 0.20 -0.3 316,268 - DZA65_RS01435 0.20 +0.8 316,268 - DZA65_RS01435 0.20 +0.2 316,268 - DZA65_RS01435 0.20 -0.9
Or see this region's nucleotide sequence