Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS00645 and DZA65_RS00650 are separated by 19 nucleotides DZA65_RS00650 and DZA65_RS00655 are separated by 89 nucleotides DZA65_RS00655 and DZA65_RS00660 overlap by 32 nucleotides
DZA65_RS00645: DZA65_RS00645 - hypothetical protein, at 149,903 to 150,667
_RS00645
DZA65_RS00650: DZA65_RS00650 - hypothetical protein, at 150,687 to 151,449
_RS00650
DZA65_RS00655: DZA65_RS00655 - ABC transporter ATP-binding protein, at 151,539 to 152,240
_RS00655
DZA65_RS00660: DZA65_RS00660 - ABC transporter permease, at 152,209 to 153,453
_RS00660
Position (kb) 151
152
153 Strain fitness (log2 ratio) -2
-1
0
1
2 at 151.105 kb on + strand, within DZA65_RS00650 at 151.105 kb on + strand, within DZA65_RS00650 at 151.162 kb on + strand, within DZA65_RS00650 at 151.162 kb on + strand, within DZA65_RS00650 at 151.162 kb on + strand, within DZA65_RS00650 at 151.163 kb on - strand, within DZA65_RS00650 at 151.163 kb on - strand, within DZA65_RS00650 at 151.163 kb on - strand, within DZA65_RS00650 at 151.163 kb on - strand, within DZA65_RS00650 at 151.163 kb on - strand, within DZA65_RS00650 at 151.163 kb on - strand, within DZA65_RS00650 at 151.163 kb on - strand, within DZA65_RS00650 at 151.163 kb on - strand, within DZA65_RS00650 at 151.163 kb on - strand, within DZA65_RS00650 at 151.206 kb on - strand, within DZA65_RS00650 at 151.216 kb on + strand, within DZA65_RS00650 at 151.216 kb on + strand, within DZA65_RS00650 at 151.216 kb on + strand, within DZA65_RS00650 at 151.217 kb on - strand, within DZA65_RS00650 at 151.217 kb on - strand, within DZA65_RS00650 at 151.217 kb on - strand, within DZA65_RS00650 at 151.217 kb on - strand, within DZA65_RS00650 at 151.217 kb on - strand, within DZA65_RS00650 at 151.224 kb on + strand, within DZA65_RS00650 at 151.249 kb on + strand, within DZA65_RS00650 at 151.249 kb on + strand, within DZA65_RS00650 at 151.249 kb on + strand, within DZA65_RS00650 at 151.250 kb on - strand, within DZA65_RS00650 at 151.250 kb on - strand, within DZA65_RS00650 at 151.250 kb on - strand, within DZA65_RS00650 at 151.250 kb on - strand, within DZA65_RS00650 at 151.250 kb on - strand, within DZA65_RS00650 at 151.250 kb on - strand, within DZA65_RS00650 at 151.250 kb on - strand, within DZA65_RS00650 at 151.270 kb on + strand, within DZA65_RS00650 at 151.271 kb on - strand, within DZA65_RS00650 at 151.271 kb on - strand, within DZA65_RS00650 at 151.416 kb on - strand at 151.493 kb on + strand at 151.493 kb on + strand at 151.493 kb on + strand at 151.493 kb on + strand at 151.494 kb on - strand at 151.494 kb on - strand at 151.494 kb on - strand at 151.494 kb on - strand at 151.497 kb on + strand at 151.497 kb on + strand at 151.497 kb on + strand at 151.497 kb on + strand at 151.497 kb on + strand at 151.497 kb on + strand at 151.497 kb on + strand at 151.498 kb on - strand at 151.498 kb on - strand at 151.498 kb on - strand at 151.498 kb on - strand at 151.498 kb on - strand at 151.509 kb on - strand at 151.574 kb on - strand at 151.593 kb on + strand at 151.594 kb on - strand at 151.610 kb on + strand, within DZA65_RS00655 at 151.610 kb on + strand, within DZA65_RS00655 at 151.649 kb on + strand, within DZA65_RS00655 at 151.691 kb on + strand, within DZA65_RS00655 at 151.692 kb on - strand, within DZA65_RS00655 at 151.698 kb on - strand, within DZA65_RS00655 at 151.698 kb on - strand, within DZA65_RS00655 at 151.698 kb on - strand, within DZA65_RS00655 at 151.698 kb on - strand, within DZA65_RS00655 at 151.806 kb on - strand, within DZA65_RS00655 at 151.825 kb on + strand, within DZA65_RS00655 at 151.825 kb on + strand, within DZA65_RS00655 at 151.826 kb on - strand, within DZA65_RS00655 at 151.891 kb on - strand, within DZA65_RS00655 at 151.898 kb on + strand, within DZA65_RS00655 at 151.898 kb on + strand, within DZA65_RS00655 at 151.898 kb on + strand, within DZA65_RS00655 at 151.898 kb on + strand, within DZA65_RS00655 at 151.898 kb on + strand, within DZA65_RS00655 at 151.899 kb on - strand, within DZA65_RS00655 at 151.899 kb on - strand, within DZA65_RS00655 at 151.899 kb on - strand at 151.900 kb on + strand, within DZA65_RS00655 at 151.901 kb on - strand, within DZA65_RS00655 at 151.901 kb on - strand, within DZA65_RS00655 at 151.901 kb on - strand, within DZA65_RS00655 at 152.073 kb on - strand, within DZA65_RS00655 at 152.113 kb on + strand, within DZA65_RS00655 at 152.113 kb on + strand, within DZA65_RS00655 at 152.152 kb on + strand, within DZA65_RS00655 at 152.257 kb on + strand at 152.258 kb on - strand at 152.339 kb on + strand, within DZA65_RS00660 at 152.339 kb on + strand, within DZA65_RS00660 at 152.339 kb on + strand, within DZA65_RS00660 at 152.339 kb on + strand, within DZA65_RS00660 at 152.339 kb on + strand, within DZA65_RS00660 at 152.339 kb on + strand, within DZA65_RS00660 at 152.340 kb on - strand, within DZA65_RS00660 at 152.340 kb on - strand, within DZA65_RS00660 at 152.340 kb on - strand, within DZA65_RS00660 at 152.340 kb on - strand, within DZA65_RS00660 at 152.340 kb on - strand, within DZA65_RS00660 at 152.343 kb on + strand, within DZA65_RS00660 at 152.343 kb on + strand, within DZA65_RS00660 at 152.343 kb on + strand, within DZA65_RS00660 at 152.343 kb on + strand, within DZA65_RS00660 at 152.343 kb on + strand, within DZA65_RS00660 at 152.343 kb on + strand, within DZA65_RS00660 at 152.344 kb on - strand, within DZA65_RS00660 at 152.344 kb on - strand, within DZA65_RS00660 at 152.344 kb on - strand, within DZA65_RS00660 at 152.344 kb on - strand, within DZA65_RS00660 at 152.344 kb on - strand, within DZA65_RS00660 at 152.344 kb on - strand, within DZA65_RS00660 at 152.344 kb on - strand, within DZA65_RS00660 at 152.410 kb on - strand, within DZA65_RS00660 at 152.417 kb on + strand, within DZA65_RS00660 at 152.418 kb on - strand, within DZA65_RS00660 at 152.418 kb on - strand, within DZA65_RS00660 at 152.418 kb on - strand, within DZA65_RS00660 at 152.427 kb on + strand, within DZA65_RS00660 at 152.427 kb on + strand, within DZA65_RS00660 at 152.428 kb on - strand, within DZA65_RS00660 at 152.452 kb on - strand, within DZA65_RS00660 at 152.488 kb on + strand, within DZA65_RS00660 at 152.539 kb on - strand, within DZA65_RS00660 at 152.585 kb on + strand, within DZA65_RS00660 at 152.585 kb on + strand, within DZA65_RS00660 at 152.585 kb on + strand, within DZA65_RS00660 at 152.585 kb on + strand, within DZA65_RS00660 at 152.585 kb on + strand, within DZA65_RS00660 at 152.585 kb on + strand, within DZA65_RS00660 at 152.586 kb on - strand, within DZA65_RS00660 at 152.586 kb on - strand, within DZA65_RS00660 at 152.586 kb on - strand, within DZA65_RS00660 at 152.586 kb on - strand, within DZA65_RS00660 at 152.586 kb on - strand, within DZA65_RS00660 at 152.586 kb on - strand, within DZA65_RS00660 at 152.586 kb on - strand, within DZA65_RS00660 at 152.586 kb on - strand, within DZA65_RS00660 at 152.604 kb on + strand, within DZA65_RS00660 at 152.604 kb on + strand, within DZA65_RS00660 at 152.604 kb on + strand, within DZA65_RS00660 at 152.604 kb on + strand, within DZA65_RS00660 at 152.604 kb on + strand, within DZA65_RS00660 at 152.605 kb on - strand, within DZA65_RS00660 at 152.605 kb on - strand, within DZA65_RS00660 at 152.605 kb on - strand, within DZA65_RS00660 at 152.605 kb on - strand, within DZA65_RS00660 at 152.616 kb on - strand, within DZA65_RS00660 at 152.616 kb on - strand, within DZA65_RS00660 at 152.623 kb on - strand, within DZA65_RS00660 at 152.651 kb on + strand, within DZA65_RS00660 at 152.651 kb on + strand, within DZA65_RS00660 at 152.651 kb on + strand, within DZA65_RS00660 at 152.652 kb on - strand, within DZA65_RS00660 at 152.652 kb on - strand, within DZA65_RS00660 at 152.652 kb on - strand, within DZA65_RS00660 at 152.652 kb on - strand, within DZA65_RS00660 at 152.683 kb on + strand, within DZA65_RS00660 at 152.683 kb on + strand, within DZA65_RS00660 at 152.683 kb on + strand, within DZA65_RS00660 at 152.683 kb on + strand, within DZA65_RS00660 at 152.684 kb on - strand, within DZA65_RS00660 at 152.684 kb on - strand, within DZA65_RS00660 at 152.748 kb on + strand, within DZA65_RS00660 at 152.748 kb on + strand, within DZA65_RS00660 at 152.749 kb on - strand, within DZA65_RS00660 at 152.788 kb on + strand, within DZA65_RS00660 at 152.789 kb on - strand, within DZA65_RS00660 at 152.789 kb on - strand, within DZA65_RS00660 at 152.876 kb on + strand, within DZA65_RS00660 at 152.876 kb on + strand, within DZA65_RS00660 at 152.921 kb on + strand, within DZA65_RS00660 at 152.921 kb on + strand, within DZA65_RS00660 at 152.921 kb on + strand, within DZA65_RS00660 at 152.921 kb on + strand, within DZA65_RS00660 at 152.922 kb on - strand, within DZA65_RS00660 at 152.922 kb on - strand, within DZA65_RS00660 at 152.922 kb on - strand, within DZA65_RS00660 at 152.922 kb on - strand, within DZA65_RS00660 at 152.922 kb on - strand, within DZA65_RS00660 at 152.922 kb on - strand, within DZA65_RS00660 at 152.922 kb on - strand, within DZA65_RS00660 at 153.046 kb on - strand, within DZA65_RS00660 at 153.046 kb on - strand, within DZA65_RS00660 at 153.046 kb on - strand, within DZA65_RS00660 at 153.098 kb on + strand, within DZA65_RS00660 at 153.098 kb on + strand, within DZA65_RS00660 at 153.098 kb on + strand, within DZA65_RS00660 at 153.098 kb on + strand, within DZA65_RS00660 at 153.098 kb on + strand, within DZA65_RS00660 at 153.099 kb on - strand, within DZA65_RS00660 at 153.099 kb on - strand, within DZA65_RS00660 at 153.099 kb on - strand, within DZA65_RS00660 at 153.099 kb on - strand, within DZA65_RS00660 at 153.099 kb on - strand at 153.099 kb on - strand, within DZA65_RS00660 at 153.099 kb on - strand, within DZA65_RS00660 at 153.099 kb on - strand, within DZA65_RS00660 at 153.099 kb on - strand, within DZA65_RS00660 at 153.176 kb on + strand, within DZA65_RS00660 at 153.176 kb on + strand, within DZA65_RS00660 at 153.177 kb on - strand, within DZA65_RS00660 at 153.177 kb on - strand, within DZA65_RS00660
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 151,105 + DZA65_RS00650 0.55 -0.7 151,105 + DZA65_RS00650 0.55 +0.2 151,162 + DZA65_RS00650 0.62 -1.6 151,162 + DZA65_RS00650 0.62 +1.4 151,162 + DZA65_RS00650 0.62 -0.6 151,163 - DZA65_RS00650 0.62 -0.9 151,163 - DZA65_RS00650 0.62 +1.4 151,163 - DZA65_RS00650 0.62 +0.7 151,163 - DZA65_RS00650 0.62 +1.0 151,163 - DZA65_RS00650 0.62 +0.3 151,163 - DZA65_RS00650 0.62 +0.5 151,163 - DZA65_RS00650 0.62 +0.2 151,163 - DZA65_RS00650 0.62 -0.5 151,163 - DZA65_RS00650 0.62 -0.5 151,206 - DZA65_RS00650 0.68 +2.0 151,216 + DZA65_RS00650 0.69 -1.0 151,216 + DZA65_RS00650 0.69 -0.2 151,216 + DZA65_RS00650 0.69 +0.0 151,217 - DZA65_RS00650 0.69 +0.1 151,217 - DZA65_RS00650 0.69 -0.7 151,217 - DZA65_RS00650 0.69 -0.7 151,217 - DZA65_RS00650 0.69 -0.9 151,217 - DZA65_RS00650 0.69 -0.9 151,224 + DZA65_RS00650 0.70 -0.3 151,249 + DZA65_RS00650 0.74 -0.9 151,249 + DZA65_RS00650 0.74 -1.4 151,249 + DZA65_RS00650 0.74 +0.7 151,250 - DZA65_RS00650 0.74 -0.7 151,250 - DZA65_RS00650 0.74 +1.6 151,250 - DZA65_RS00650 0.74 +1.3 151,250 - DZA65_RS00650 0.74 -0.1 151,250 - DZA65_RS00650 0.74 -0.1 151,250 - DZA65_RS00650 0.74 +1.5 151,250 - DZA65_RS00650 0.74 -1.2 151,270 + DZA65_RS00650 0.76 -1.3 151,271 - DZA65_RS00650 0.77 -0.9 151,271 - DZA65_RS00650 0.77 -1.0 151,416 - -0.7 151,493 + -2.2 151,493 + -0.3 151,493 + +0.0 151,493 + -1.7 151,494 - +0.1 151,494 - -0.9 151,494 - +0.9 151,494 - -0.2 151,497 + -1.0 151,497 + -0.5 151,497 + -1.1 151,497 + -0.1 151,497 + -0.4 151,497 + -0.6 151,497 + -0.5 151,498 - +0.8 151,498 - +0.8 151,498 - -1.6 151,498 - -0.2 151,498 - +0.2 151,509 - +0.7 151,574 - -0.4 151,593 + -0.2 151,594 - +0.0 151,610 + DZA65_RS00655 0.10 -1.4 151,610 + DZA65_RS00655 0.10 -0.8 151,649 + DZA65_RS00655 0.16 -0.2 151,691 + DZA65_RS00655 0.22 +0.2 151,692 - DZA65_RS00655 0.22 +0.3 151,698 - DZA65_RS00655 0.23 -1.7 151,698 - DZA65_RS00655 0.23 -1.0 151,698 - DZA65_RS00655 0.23 -1.0 151,698 - DZA65_RS00655 0.23 +0.1 151,806 - DZA65_RS00655 0.38 -0.6 151,825 + DZA65_RS00655 0.41 -0.0 151,825 + DZA65_RS00655 0.41 -1.0 151,826 - DZA65_RS00655 0.41 -0.5 151,891 - DZA65_RS00655 0.50 -0.3 151,898 + DZA65_RS00655 0.51 -0.1 151,898 + DZA65_RS00655 0.51 -0.4 151,898 + DZA65_RS00655 0.51 -1.1 151,898 + DZA65_RS00655 0.51 -0.4 151,898 + DZA65_RS00655 0.51 -0.3 151,899 - DZA65_RS00655 0.51 -0.4 151,899 - DZA65_RS00655 0.51 +0.5 151,899 - -0.2 151,900 + DZA65_RS00655 0.51 -1.2 151,901 - DZA65_RS00655 0.52 +0.2 151,901 - DZA65_RS00655 0.52 -0.9 151,901 - DZA65_RS00655 0.52 +0.4 152,073 - DZA65_RS00655 0.76 -0.3 152,113 + DZA65_RS00655 0.82 +0.7 152,113 + DZA65_RS00655 0.82 +0.1 152,152 + DZA65_RS00655 0.87 +0.1 152,257 + +0.8 152,258 - -2.0 152,339 + DZA65_RS00660 0.10 -1.0 152,339 + DZA65_RS00660 0.10 -0.1 152,339 + DZA65_RS00660 0.10 +0.7 152,339 + DZA65_RS00660 0.10 +0.5 152,339 + DZA65_RS00660 0.10 +1.8 152,339 + DZA65_RS00660 0.10 +0.3 152,340 - DZA65_RS00660 0.11 +1.3 152,340 - DZA65_RS00660 0.11 -0.4 152,340 - DZA65_RS00660 0.11 -0.1 152,340 - DZA65_RS00660 0.11 -0.5 152,340 - DZA65_RS00660 0.11 +1.6 152,343 + DZA65_RS00660 0.11 -1.2 152,343 + DZA65_RS00660 0.11 -1.1 152,343 + DZA65_RS00660 0.11 -0.3 152,343 + DZA65_RS00660 0.11 -0.3 152,343 + DZA65_RS00660 0.11 -0.3 152,343 + DZA65_RS00660 0.11 -1.4 152,344 - DZA65_RS00660 0.11 -0.9 152,344 - DZA65_RS00660 0.11 -0.7 152,344 - DZA65_RS00660 0.11 +0.1 152,344 - DZA65_RS00660 0.11 -1.2 152,344 - DZA65_RS00660 0.11 -0.5 152,344 - DZA65_RS00660 0.11 +0.9 152,344 - DZA65_RS00660 0.11 +0.5 152,410 - DZA65_RS00660 0.16 -0.5 152,417 + DZA65_RS00660 0.17 +0.7 152,418 - DZA65_RS00660 0.17 -0.6 152,418 - DZA65_RS00660 0.17 -0.9 152,418 - DZA65_RS00660 0.17 -0.8 152,427 + DZA65_RS00660 0.18 +0.3 152,427 + DZA65_RS00660 0.18 -1.1 152,428 - DZA65_RS00660 0.18 +0.4 152,452 - DZA65_RS00660 0.20 -0.3 152,488 + DZA65_RS00660 0.22 +0.0 152,539 - DZA65_RS00660 0.27 -0.7 152,585 + DZA65_RS00660 0.30 -0.5 152,585 + DZA65_RS00660 0.30 +0.5 152,585 + DZA65_RS00660 0.30 -0.4 152,585 + DZA65_RS00660 0.30 +0.4 152,585 + DZA65_RS00660 0.30 -0.5 152,585 + DZA65_RS00660 0.30 +1.0 152,586 - DZA65_RS00660 0.30 -1.7 152,586 - DZA65_RS00660 0.30 +0.2 152,586 - DZA65_RS00660 0.30 -0.3 152,586 - DZA65_RS00660 0.30 +0.2 152,586 - DZA65_RS00660 0.30 -0.2 152,586 - DZA65_RS00660 0.30 -0.0 152,586 - DZA65_RS00660 0.30 -0.8 152,586 - DZA65_RS00660 0.30 -0.2 152,604 + DZA65_RS00660 0.32 +0.4 152,604 + DZA65_RS00660 0.32 -1.5 152,604 + DZA65_RS00660 0.32 -0.7 152,604 + DZA65_RS00660 0.32 -0.9 152,604 + DZA65_RS00660 0.32 -0.1 152,605 - DZA65_RS00660 0.32 +2.6 152,605 - DZA65_RS00660 0.32 +1.4 152,605 - DZA65_RS00660 0.32 +0.7 152,605 - DZA65_RS00660 0.32 +0.6 152,616 - DZA65_RS00660 0.33 +0.3 152,616 - DZA65_RS00660 0.33 -0.1 152,623 - DZA65_RS00660 0.33 +0.0 152,651 + DZA65_RS00660 0.36 +0.2 152,651 + DZA65_RS00660 0.36 +0.5 152,651 + DZA65_RS00660 0.36 -0.5 152,652 - DZA65_RS00660 0.36 +0.6 152,652 - DZA65_RS00660 0.36 -1.4 152,652 - DZA65_RS00660 0.36 +0.6 152,652 - DZA65_RS00660 0.36 -1.7 152,683 + DZA65_RS00660 0.38 +0.2 152,683 + DZA65_RS00660 0.38 -0.4 152,683 + DZA65_RS00660 0.38 -0.3 152,683 + DZA65_RS00660 0.38 -0.3 152,684 - DZA65_RS00660 0.38 +0.1 152,684 - DZA65_RS00660 0.38 -0.3 152,748 + DZA65_RS00660 0.43 -0.8 152,748 + DZA65_RS00660 0.43 -0.1 152,749 - DZA65_RS00660 0.43 +0.7 152,788 + DZA65_RS00660 0.47 +0.4 152,789 - DZA65_RS00660 0.47 +1.6 152,789 - DZA65_RS00660 0.47 +0.2 152,876 + DZA65_RS00660 0.54 -1.1 152,876 + DZA65_RS00660 0.54 -1.5 152,921 + DZA65_RS00660 0.57 +0.8 152,921 + DZA65_RS00660 0.57 +0.3 152,921 + DZA65_RS00660 0.57 -1.6 152,921 + DZA65_RS00660 0.57 +0.3 152,922 - DZA65_RS00660 0.57 -2.2 152,922 - DZA65_RS00660 0.57 +0.4 152,922 - DZA65_RS00660 0.57 -0.6 152,922 - DZA65_RS00660 0.57 -0.9 152,922 - DZA65_RS00660 0.57 -1.2 152,922 - DZA65_RS00660 0.57 -0.6 152,922 - DZA65_RS00660 0.57 +0.2 153,046 - DZA65_RS00660 0.67 +0.1 153,046 - DZA65_RS00660 0.67 -2.7 153,046 - DZA65_RS00660 0.67 +1.4 153,098 + DZA65_RS00660 0.71 -0.5 153,098 + DZA65_RS00660 0.71 +0.7 153,098 + DZA65_RS00660 0.71 -0.1 153,098 + DZA65_RS00660 0.71 -0.4 153,098 + DZA65_RS00660 0.71 -0.7 153,099 - DZA65_RS00660 0.71 +1.3 153,099 - DZA65_RS00660 0.71 -1.3 153,099 - DZA65_RS00660 0.71 +0.6 153,099 - DZA65_RS00660 0.71 +0.4 153,099 - +1.6 153,099 - DZA65_RS00660 0.71 +0.5 153,099 - DZA65_RS00660 0.71 -1.9 153,099 - DZA65_RS00660 0.71 -1.2 153,099 - DZA65_RS00660 0.71 -0.5 153,176 + DZA65_RS00660 0.78 -0.3 153,176 + DZA65_RS00660 0.78 +0.4 153,177 - DZA65_RS00660 0.78 +1.6 153,177 - DZA65_RS00660 0.78 -0.9
Or see this region's nucleotide sequence