Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS18230

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,088,464	-				-0.3
4,088,501	-		HGI48_RS18220	0.39	-0.1
4,088,789	-				-3.2
4,088,801	-				-2.1
4,088,816	-				-0.3
4,088,832	+				-3.0
4,088,833	-				-1.6
4,088,834	+				-0.3
4,088,835	-				-0.1
4,088,860	-				-1.8
4,088,887	+				+1.0
4,088,887	+				-0.6
4,088,887	+				+0.3
4,088,888	-				-1.1
4,088,888	-				+0.2
4,088,888	-				-1.1
4,088,906	+				-0.3
4,088,906	+				+2.0
4,088,906	+				-1.0
4,088,906	+				-0.6
4,088,907	-				-0.8
4,088,928	-				-0.8
4,088,977	-		HGI48_RS18225	0.15	+1.8
4,089,029	+		HGI48_RS18225	0.26	-1.4
4,089,030	-		HGI48_RS18225	0.27	-0.8
4,089,069	+		HGI48_RS18225	0.35	+0.7
4,089,070	-		HGI48_RS18225	0.35	-0.6
4,089,070	-		HGI48_RS18225	0.35	+1.2
4,089,070	-		HGI48_RS18225	0.35	-0.4
4,089,070	-		HGI48_RS18225	0.35	-0.4
4,089,070	-		HGI48_RS18225	0.35	+0.4
4,089,072	-		HGI48_RS18225	0.35	+0.7
4,089,269	+		HGI48_RS18225	0.77	+1.0
4,089,294	+		HGI48_RS18225	0.83	-0.4
4,089,294	+		HGI48_RS18225	0.83	+0.2
4,089,295	-		HGI48_RS18225	0.83	-1.6
4,089,295	-		HGI48_RS18225	0.83	+0.0
4,089,298	+		HGI48_RS18225	0.83	+0.6
4,089,298	+		HGI48_RS18225	0.83	+0.6
4,089,298	+				-0.3
4,089,298	+		HGI48_RS18225	0.83	-0.3
4,089,298	+		HGI48_RS18225	0.83	-1.3
4,089,298	+		HGI48_RS18225	0.83	-1.1
4,089,298	+		HGI48_RS18225	0.83	+0.5
4,089,299	-		HGI48_RS18225	0.84	-1.1
4,089,299	-		HGI48_RS18225	0.84	+0.3
4,089,299	-		HGI48_RS18225	0.84	-1.3
4,089,299	-				-0.8
4,089,299	-				-0.8
4,089,299	-		HGI48_RS18225	0.84	+0.3
4,089,304	-		HGI48_RS18225	0.85	-2.5
4,089,314	-		HGI48_RS18225	0.87	-0.3
4,089,416	+				+0.6
4,089,416	+				+0.3
4,089,417	-				-0.3
4,089,488	+		HGI48_RS18230	0.16	-0.6
4,089,489	-		HGI48_RS18230	0.16	-0.9
4,089,624	-		HGI48_RS18230	0.34	+0.0
4,089,626	+		HGI48_RS18230	0.34	-0.6
4,089,627	-		HGI48_RS18230	0.34	-0.5
4,089,636	-		HGI48_RS18230	0.35	-0.8
4,089,679	+		HGI48_RS18230	0.41	+1.7
4,089,679	+		HGI48_RS18230	0.41	-1.6
4,089,679	+		HGI48_RS18230	0.41	-0.8
4,089,680	-		HGI48_RS18230	0.41	-0.4
4,089,680	-		HGI48_RS18230	0.41	-0.8
4,089,680	-		HGI48_RS18230	0.41	-0.3
4,089,680	-		HGI48_RS18230	0.41	-0.3
4,089,680	-		HGI48_RS18230	0.41	+1.0
4,089,680	-		HGI48_RS18230	0.41	-2.0
4,089,680	-		HGI48_RS18230	0.41	-0.5
4,089,854	+		HGI48_RS18230	0.63	+1.2
4,089,854	+		HGI48_RS18230	0.63	-2.3
4,089,854	+				+0.2
4,089,855	-		HGI48_RS18230	0.63	-0.2
4,089,855	-		HGI48_RS18230	0.63	+0.4
4,089,882	+		HGI48_RS18230	0.67	-0.8
4,089,882	+		HGI48_RS18230	0.67	-0.5
4,089,882	+		HGI48_RS18230	0.67	+0.7
4,089,883	-		HGI48_RS18230	0.67	+0.3
4,089,883	-		HGI48_RS18230	0.67	-1.0
4,089,883	-		HGI48_RS18230	0.67	+1.0
4,090,055	+		HGI48_RS18230	0.89	+0.0
4,090,055	+		HGI48_RS18230	0.89	+0.4
4,090,056	-		HGI48_RS18230	0.89	+1.9
4,090,056	-		HGI48_RS18230	0.89	+0.9
4,090,056	-		HGI48_RS18230	0.89	-1.5
4,090,056	-		HGI48_RS18230	0.89	-1.8
4,090,056	-				-0.8
4,090,056	-		HGI48_RS18230	0.89	-0.4
4,090,056	-		HGI48_RS18230	0.89	+0.3
4,090,056	-				+0.7
4,090,056	-		HGI48_RS18230	0.89	-1.6
4,090,056	-		HGI48_RS18230	0.89	+0.7
4,090,097	+				-1.8
4,090,098	-				+0.1
4,090,098	-				+0.3
4,090,137	+				-0.3
4,090,137	+				-0.3
4,090,137	+				-1.3
4,090,137	+				+0.0
4,090,137	+				-1.8
4,090,138	-				-0.4
4,090,138	-				-0.5
4,090,138	-				+0.0
4,090,145	+				+0.4
4,090,145	+				-1.8
4,090,145	+				+0.3
4,090,145	+				+0.7
4,090,146	-				-2.1
4,090,146	-				+0.6
4,090,178	+				+0.2
4,090,178	+				-0.3
4,090,180	+				+0.3
4,090,180	+				-1.1
4,090,180	+				-0.5
4,090,180	+				+0.4
4,090,201	+				-0.6
4,090,252	+				-0.8
4,090,252	+				+0.2
4,090,256	-				-1.5
4,090,256	-				-0.7
4,090,256	-				-1.8
4,090,256	-				-0.8
4,090,300	+				+1.4
4,090,300	+				-0.7
4,090,300	+				+0.0
4,090,300	+				-1.0
4,090,301	-				+0.6
4,090,301	-				-1.0
4,090,301	-				-0.6
4,090,301	-				-0.1
4,090,321	-				-2.1
4,090,321	-				-0.5
4,090,467	-		HGI48_RS18235	0.27	+0.4
4,090,530	-		HGI48_RS18235	0.37	-0.3
4,090,530	-		HGI48_RS18235	0.37	+0.1
4,090,530	-		HGI48_RS18235	0.37	+0.2
4,090,558	-		HGI48_RS18235	0.41	+1.2
4,090,645	+		HGI48_RS18235	0.56	+0.3
4,090,655	+				+0.2
4,090,709	-		HGI48_RS18235	0.66	-2.2
4,090,709	-		HGI48_RS18235	0.66	-0.0
4,090,719	+		HGI48_RS18235	0.68	+0.2
4,090,719	+		HGI48_RS18235	0.68	-0.3
4,090,884	+				-1.8
4,090,884	+				+0.1
4,090,884	+				+1.1
4,090,884	+				-0.7
4,090,910	+				-0.3
4,090,910	+				+1.2
4,090,910	+				+0.6
4,090,911	-				-0.4
4,090,915	+				+1.2
4,090,915	+				-0.6
4,090,916	-				-1.6
4,090,931	+				+0.3
4,090,932	-				+0.2
4,090,932	-				-0.3
4,090,972	+				-1.3
4,090,982	+				-1.8
4,091,012	+				-1.3
4,091,019	+				+0.1
4,091,124	+				-1.5
4,091,125	-				-1.0
4,091,134	+				-2.3
4,091,135	-				+1.7
4,091,135	-				-1.6
4,091,135	-				-0.7
4,091,135	-				-1.3
4,091,135	-				-1.4
4,091,135	-				-1.3
4,091,135	-				-1.4
4,091,135	-				-2.6
4,091,135	-				-2.4
4,091,135	-				-3.1
4,091,135	-				-1.0
4,091,135	-				+0.7
4,091,135	-				-0.3
4,091,136	+				-2.4
4,091,136	+				+0.3
4,091,136	+				-1.3
4,091,137	-				-1.6
4,091,137	-				-0.8