Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS13770

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,069,112	+		HGI48_RS13765	0.22	-1.2
3,069,116	+				+0.4
3,069,116	+		HGI48_RS13765	0.22	+0.1
3,069,117	-		HGI48_RS13765	0.22	+0.1
3,069,117	-				-1.2
3,069,117	-		HGI48_RS13765	0.22	-0.3
3,069,117	-		HGI48_RS13765	0.22	-0.1
3,069,117	-		HGI48_RS13765	0.22	+0.1
3,069,117	-		HGI48_RS13765	0.22	+0.0
3,069,215	-		HGI48_RS13765	0.30	-0.8
3,069,215	-		HGI48_RS13765	0.30	-0.2
3,069,253	-		HGI48_RS13765	0.33	-0.1
3,069,257	-		HGI48_RS13765	0.33	-1.8
3,069,257	-		HGI48_RS13765	0.33	+0.0
3,069,269	-		HGI48_RS13765	0.34	+0.4
3,069,307	+		HGI48_RS13765	0.37	-0.5
3,069,308	-		HGI48_RS13765	0.37	-1.2
3,069,396	+		HGI48_RS13765	0.44	-2.0
3,069,402	+		HGI48_RS13765	0.45	+0.1
3,069,402	+		HGI48_RS13765	0.45	-2.0
3,069,402	+		HGI48_RS13765	0.45	-2.8
3,069,402	+		HGI48_RS13765	0.45	-2.0
3,069,403	-		HGI48_RS13765	0.45	+0.4
3,069,403	-		HGI48_RS13765	0.45	-0.6
3,069,403	-		HGI48_RS13765	0.45	-1.0
3,069,403	-		HGI48_RS13765	0.45	-2.0
3,069,403	-		HGI48_RS13765	0.45	-1.6
3,069,403	-		HGI48_RS13765	0.45	-0.1
3,069,403	-		HGI48_RS13765	0.45	-0.9
3,069,439	+		HGI48_RS13765	0.48	+0.7
3,069,439	+		HGI48_RS13765	0.48	-1.4
3,069,440	-		HGI48_RS13765	0.48	-0.8
3,069,440	-		HGI48_RS13765	0.48	+0.8
3,069,440	-		HGI48_RS13765	0.48	-0.6
3,069,440	-		HGI48_RS13765	0.48	-0.9
3,069,522	-		HGI48_RS13765	0.54	-0.1
3,069,557	+		HGI48_RS13765	0.57	-0.3
3,069,557	+				-1.2
3,069,558	-		HGI48_RS13765	0.57	-0.1
3,069,558	-		HGI48_RS13765	0.57	+0.1
3,069,625	+		HGI48_RS13765	0.62	+0.3
3,069,707	+				+0.9
3,069,707	+		HGI48_RS13765	0.69	-0.2
3,069,708	-		HGI48_RS13765	0.69	-0.0
3,069,708	-		HGI48_RS13765	0.69	+0.1
3,069,728	-		HGI48_RS13765	0.71	+0.7
3,069,728	-		HGI48_RS13765	0.71	-0.0
3,069,728	-		HGI48_RS13765	0.71	+0.7
3,069,728	-				+0.8
3,069,924	+		HGI48_RS13765	0.86	-1.2
3,069,938	+		HGI48_RS13765	0.87	-0.4
3,069,938	+				+1.7
3,070,086	-				+0.8
3,070,086	-				-0.6
3,070,097	+				-0.6
3,070,097	+				+1.5
3,070,097	+				-0.2
3,070,100	+				+0.9
3,070,100	+				+1.0
3,070,101	-				-0.2
3,070,101	-				-1.4
3,070,152	+				-0.4
3,070,153	-				-0.1
3,070,153	-				-0.5
3,070,162	+				+0.5
3,070,162	+				+0.8
3,070,163	-				-0.4
3,070,163	-				-0.6
3,070,163	-				-0.4
3,070,165	-				+0.1
3,070,251	-		HGI48_RS13770	0.19	+0.0
3,070,251	-		HGI48_RS13770	0.19	-0.7
3,070,253	-		HGI48_RS13770	0.19	+0.6
3,070,253	-		HGI48_RS13770	0.19	-1.6
3,070,253	-		HGI48_RS13770	0.19	-1.4
3,070,253	-				-1.2
3,070,255	+				+0.4
3,070,309	+		HGI48_RS13770	0.26	+0.0
3,070,309	+		HGI48_RS13770	0.26	-0.8
3,070,309	+		HGI48_RS13770	0.26	+0.1
3,070,310	-		HGI48_RS13770	0.27	-0.3
3,070,310	-		HGI48_RS13770	0.27	-0.8
3,070,388	+		HGI48_RS13770	0.37	+0.8
3,070,388	+				+2.9
3,070,389	-		HGI48_RS13770	0.37	-2.2
3,070,389	-		HGI48_RS13770	0.37	-0.4
3,070,389	-		HGI48_RS13770	0.37	+0.2
3,070,389	-		HGI48_RS13770	0.37	-1.0
3,070,389	-		HGI48_RS13770	0.37	+0.7
3,070,389	-		HGI48_RS13770	0.37	-1.4
3,070,389	-		HGI48_RS13770	0.37	+0.6
3,070,404	+		HGI48_RS13770	0.39	-2.0
3,070,404	+		HGI48_RS13770	0.39	+0.6
3,070,404	+		HGI48_RS13770	0.39	+0.4
3,070,405	-				-1.2
3,070,405	-		HGI48_RS13770	0.39	+0.3
3,070,406	+				-1.2
3,070,406	+		HGI48_RS13770	0.39	-0.1
3,070,406	+		HGI48_RS13770	0.39	-1.2
3,070,406	+		HGI48_RS13770	0.39	-0.6
3,070,407	-		HGI48_RS13770	0.39	-0.6
3,070,407	-		HGI48_RS13770	0.39	-0.8
3,070,407	-		HGI48_RS13770	0.39	-1.2
3,070,450	+		HGI48_RS13770	0.45	-0.9
3,070,450	+		HGI48_RS13770	0.45	-0.6
3,070,543	+		HGI48_RS13770	0.56	+1.6
3,070,543	+		HGI48_RS13770	0.56	-0.3
3,070,568	-				+0.9
3,070,587	+		HGI48_RS13770	0.62	-2.2
3,070,587	+		HGI48_RS13770	0.62	-2.2
3,070,587	+		HGI48_RS13770	0.62	-0.3
3,070,587	+		HGI48_RS13770	0.62	-1.4
3,070,587	+		HGI48_RS13770	0.62	-1.8
3,070,587	+				+1.4
3,070,587	+		HGI48_RS13770	0.62	+0.4
3,070,588	-		HGI48_RS13770	0.62	-1.5
3,070,588	-		HGI48_RS13770	0.62	-1.6
3,070,589	+		HGI48_RS13770	0.62	-0.4
3,070,589	+		HGI48_RS13770	0.62	-0.9
3,070,589	+		HGI48_RS13770	0.62	+1.2
3,070,589	+		HGI48_RS13770	0.62	-0.1
3,070,589	+		HGI48_RS13770	0.62	-3.1
3,070,654	-		HGI48_RS13770	0.71	+0.1
3,070,690	+		HGI48_RS13770	0.75	+0.4
3,070,691	-		HGI48_RS13770	0.76	+0.0
3,070,691	-				+1.6
3,070,732	-		HGI48_RS13770	0.81	-0.6
3,070,740	+		HGI48_RS13770	0.82	-1.0
3,070,740	+				+1.7
3,070,740	+		HGI48_RS13770	0.82	-0.6
3,070,741	-		HGI48_RS13770	0.82	-2.0
3,070,741	-		HGI48_RS13770	0.82	-1.1
3,070,741	-		HGI48_RS13770	0.82	+0.0
3,070,741	-		HGI48_RS13770	0.82	-0.2
3,070,742	+		HGI48_RS13770	0.82	+0.6
3,070,742	+		HGI48_RS13770	0.82	+0.7
3,070,742	+		HGI48_RS13770	0.82	+0.2
3,070,742	+		HGI48_RS13770	0.82	-0.4
3,070,742	+				-0.2
3,070,742	+		HGI48_RS13770	0.82	+0.4
3,070,742	+		HGI48_RS13770	0.82	-0.6
3,070,742	+		HGI48_RS13770	0.82	+0.7
3,070,743	-		HGI48_RS13770	0.82	+1.2
3,070,743	-		HGI48_RS13770	0.82	+1.2
3,070,743	-		HGI48_RS13770	0.82	-0.2
3,070,743	-		HGI48_RS13770	0.82	-1.6
3,070,795	+		HGI48_RS13770	0.89	-0.1
3,070,838	-				-0.4
3,070,863	+				-0.8
3,070,864	-				-0.4
3,071,003	+		HGI48_RS13775	0.16	-0.4
3,071,004	-		HGI48_RS13775	0.16	-0.3
3,071,032	+		HGI48_RS13775	0.20	-2.4
3,071,033	-		HGI48_RS13775	0.20	+0.2
3,071,034	+		HGI48_RS13775	0.20	-0.4
3,071,034	+		HGI48_RS13775	0.20	-0.9
3,071,065	+		HGI48_RS13775	0.24	+0.6
3,071,065	+		HGI48_RS13775	0.24	-1.6
3,071,065	+		HGI48_RS13775	0.24	-0.5
3,071,066	-		HGI48_RS13775	0.24	+0.8
3,071,066	-		HGI48_RS13775	0.24	-1.1
3,071,134	-		HGI48_RS13775	0.33	-1.6
3,071,244	+		HGI48_RS13775	0.48	-1.5
3,071,244	+		HGI48_RS13775	0.48	+0.9
3,071,244	+		HGI48_RS13775	0.48	+0.1
3,071,263	+		HGI48_RS13775	0.50	-1.0
3,071,264	-		HGI48_RS13775	0.51	-0.2
3,071,264	-		HGI48_RS13775	0.51	-0.4
3,071,264	-		HGI48_RS13775	0.51	+0.2
3,071,266	-		HGI48_RS13775	0.51	+1.0
3,071,284	+		HGI48_RS13775	0.53	-1.1
3,071,285	-		HGI48_RS13775	0.53	-2.0
3,071,285	-		HGI48_RS13775	0.53	-0.5
3,071,316	+		HGI48_RS13775	0.57	+0.0
3,071,316	+				+0.4
3,071,316	+		HGI48_RS13775	0.57	-0.4
3,071,317	-		HGI48_RS13775	0.58	-1.6
3,071,373	+		HGI48_RS13775	0.65	-0.6
3,071,373	+		HGI48_RS13775	0.65	+0.2
3,071,373	+		HGI48_RS13775	0.65	-0.3
3,071,373	+		HGI48_RS13775	0.65	-0.4
3,071,374	-		HGI48_RS13775	0.65	-0.2
3,071,374	-		HGI48_RS13775	0.65	-0.3
3,071,374	-		HGI48_RS13775	0.65	+0.1
3,071,374	-		HGI48_RS13775	0.65	-0.0
3,071,374	-		HGI48_RS13775	0.65	-0.6
3,071,377	+		HGI48_RS13775	0.66	+0.8
3,071,499	+		HGI48_RS13775	0.82	-2.0
3,071,499	+		HGI48_RS13775	0.82	-0.5
3,071,499	+		HGI48_RS13775	0.82	-0.4
3,071,499	+		HGI48_RS13775	0.82	+0.7
3,071,500	-		HGI48_RS13775	0.82	-0.4
3,071,500	-		HGI48_RS13775	0.82	-1.4
3,071,549	-		HGI48_RS13775	0.89	-0.4
3,071,549	-		HGI48_RS13775	0.89	-0.9
3,071,565	+				+0.4
3,071,565	+				+0.4
3,071,566	-				+0.4
3,071,566	-				+0.7
3,071,610	+				+0.4
3,071,611	-				+0.2
3,071,621	+				+0.6
3,071,622	-				+0.8
3,071,632	+				-0.6
3,071,633	-				-1.4
3,071,633	-				-1.4
3,071,637	-				-2.0
3,071,705	-				-1.9
3,071,746	+				+1.1
3,071,747	-				-1.6
3,071,768	+				-0.9
3,071,768	+				-2.0
3,071,768	+				-0.0
3,071,768	+				-0.4
3,071,830	-				-0.5
3,071,833	+				+0.9
3,071,834	-				-1.4