Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS13745

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,052,291	+		HGI48_RS13740	0.87	-0.1
3,052,307	+		HGI48_RS13740	0.88	-0.2
3,052,413	-		HGI48_RS13740	0.89	-0.2
3,052,426	+		HGI48_RS13740	0.89	-0.6
3,052,426	+		HGI48_RS13740	0.89	-0.4
3,052,431	-		HGI48_RS13740	0.89	-0.6
3,052,455	-		HGI48_RS13740	0.89	-2.0
3,052,460	+		HGI48_RS13740	0.90	-0.0
3,052,465	+		HGI48_RS13740	0.90	-1.0
3,052,465	+		HGI48_RS13740	0.90	-0.2
3,052,466	-		HGI48_RS13740	0.90	-0.6
3,052,508	+				-1.0
3,052,509	-				+0.9
3,052,569	+				+0.1
3,052,570	-				+0.3
3,052,849	+				+0.7
3,052,965	-				+2.5
3,053,005	+				+0.9
3,053,006	-				+0.2
3,053,006	-				-0.8
3,053,076	+				-0.6
3,053,077	-				-1.5
3,053,077	-				-0.4
3,053,091	+				-1.8
3,053,091	+				+0.1
3,053,091	+				+0.2
3,053,229	+				-0.4
3,053,229	+				+0.7
3,053,229	+				-0.6
3,053,230	-				+1.1
3,053,269	+				-2.4
3,053,269	+				-0.6
3,053,269	+				-0.1
3,053,283	+				-0.9
3,053,283	+				+0.4
3,053,283	+				-0.4
3,053,284	-				+0.2
3,053,284	-				-0.5
3,053,304	+				+0.7
3,053,305	-				-1.4
3,053,359	+				+0.2
3,053,359	+				-2.0
3,053,359	+				+0.1
3,053,360	-				+0.9
3,053,360	-				+0.5
3,053,360	-				-2.4
3,053,360	-				-1.1
3,053,360	-				-2.0
3,053,362	+				+0.1
3,053,362	+				+0.4
3,053,363	-				-0.6
3,053,363	-				-0.3
3,053,363	-				-1.6
3,053,363	-				-0.6
3,053,463	+		HGI48_RS13745	0.15	-0.3
3,053,464	-		HGI48_RS13745	0.15	+0.1
3,053,464	-		HGI48_RS13745	0.15	-1.4
3,053,512	+		HGI48_RS13745	0.19	-0.2
3,053,552	+		HGI48_RS13745	0.22	+0.6
3,053,552	+		HGI48_RS13745	0.22	-1.1
3,053,552	+		HGI48_RS13745	0.22	-1.4
3,053,553	-		HGI48_RS13745	0.22	-1.6
3,053,553	-		HGI48_RS13745	0.22	-0.6
3,053,553	-		HGI48_RS13745	0.22	-1.3
3,053,553	-		HGI48_RS13745	0.22	-1.6
3,053,553	-		HGI48_RS13745	0.22	+0.1
3,053,553	-		HGI48_RS13745	0.22	-0.2
3,053,553	-		HGI48_RS13745	0.22	+0.2
3,053,556	+		HGI48_RS13745	0.22	+0.0
3,053,556	+		HGI48_RS13745	0.22	-0.9
3,053,556	+				-1.2
3,053,557	-		HGI48_RS13745	0.22	-0.6
3,053,557	-		HGI48_RS13745	0.22	-0.7
3,053,557	-		HGI48_RS13745	0.22	-0.5
3,053,557	-				-1.2
3,053,557	-		HGI48_RS13745	0.22	-0.4
3,053,593	+		HGI48_RS13745	0.25	-0.3
3,053,626	+		HGI48_RS13745	0.27	+0.0
3,053,627	-		HGI48_RS13745	0.28	-2.1
3,053,627	-		HGI48_RS13745	0.28	+0.4
3,053,627	-		HGI48_RS13745	0.28	-1.1
3,053,627	-		HGI48_RS13745	0.28	-2.0
3,053,638	+		HGI48_RS13745	0.28	-0.6
3,053,638	+		HGI48_RS13745	0.28	+0.4
3,053,639	-		HGI48_RS13745	0.28	-0.4
3,053,642	+		HGI48_RS13745	0.29	-2.2
3,053,643	-		HGI48_RS13745	0.29	-2.6
3,053,643	-		HGI48_RS13745	0.29	+0.5
3,053,746	+		HGI48_RS13745	0.37	-0.6
3,053,841	-		HGI48_RS13745	0.44	-0.6
3,053,853	+				-0.6
3,053,853	+		HGI48_RS13745	0.45	-1.4
3,053,853	+		HGI48_RS13745	0.45	-1.5
3,053,853	+		HGI48_RS13745	0.45	-2.2
3,053,853	+		HGI48_RS13745	0.45	-0.1
3,053,853	+		HGI48_RS13745	0.45	-1.4
3,053,853	+		HGI48_RS13745	0.45	-0.3
3,053,854	-		HGI48_RS13745	0.45	-0.6
3,053,854	-		HGI48_RS13745	0.45	-1.0
3,053,854	-		HGI48_RS13745	0.45	-0.1
3,053,854	-		HGI48_RS13745	0.45	-0.5
3,053,854	-		HGI48_RS13745	0.45	-3.1
3,053,854	-				+2.7
3,053,855	+		HGI48_RS13745	0.45	-1.2
3,053,855	+				+1.4
3,053,855	+		HGI48_RS13745	0.45	-2.2
3,053,855	+		HGI48_RS13745	0.45	-0.2
3,053,855	+		HGI48_RS13745	0.45	-0.9
3,053,856	-		HGI48_RS13745	0.45	+0.3
3,053,856	-		HGI48_RS13745	0.45	+0.7
3,053,856	-		HGI48_RS13745	0.45	+0.3
3,053,856	-				-1.2
3,053,856	-		HGI48_RS13745	0.45	-0.1
3,053,857	+		HGI48_RS13745	0.45	-0.2
3,053,857	+		HGI48_RS13745	0.45	-0.3
3,053,857	+				-1.2
3,053,857	+		HGI48_RS13745	0.45	-0.2
3,053,857	+		HGI48_RS13745	0.45	-2.0
3,053,858	-		HGI48_RS13745	0.45	-0.6
3,053,858	-		HGI48_RS13745	0.45	+1.8
3,053,947	+		HGI48_RS13745	0.52	-0.9
3,053,948	-		HGI48_RS13745	0.52	-1.6
3,053,948	-		HGI48_RS13745	0.52	-0.4
3,053,950	+		HGI48_RS13745	0.52	-1.6
3,053,950	+		HGI48_RS13745	0.52	+0.2
3,053,950	+		HGI48_RS13745	0.52	+1.5
3,053,950	+		HGI48_RS13745	0.52	-0.3
3,053,950	+		HGI48_RS13745	0.52	+1.7
3,053,950	+		HGI48_RS13745	0.52	-0.2
3,053,951	-		HGI48_RS13745	0.52	-0.5
3,053,951	-		HGI48_RS13745	0.52	-0.6
3,053,966	+		HGI48_RS13745	0.53	-0.0
3,053,967	-		HGI48_RS13745	0.54	-0.8
3,053,967	-		HGI48_RS13745	0.54	+1.8
3,053,974	+		HGI48_RS13745	0.54	+0.1
3,053,974	+		HGI48_RS13745	0.54	-0.1
3,054,182	-		HGI48_RS13745	0.70	+0.8
3,054,182	-		HGI48_RS13745	0.70	+0.5
3,054,182	-		HGI48_RS13745	0.70	-0.4
3,054,274	+		HGI48_RS13745	0.77	+0.0
3,054,275	-		HGI48_RS13745	0.77	+0.7
3,054,307	+		HGI48_RS13745	0.80	-1.0
3,054,307	+		HGI48_RS13745	0.80	-1.2
3,054,307	+		HGI48_RS13745	0.80	-0.6
3,054,308	-		HGI48_RS13745	0.80	-0.6
3,054,308	-				+0.4
3,054,308	-		HGI48_RS13745	0.80	-1.0
3,054,308	-		HGI48_RS13745	0.80	-1.4
3,054,323	+		HGI48_RS13745	0.81	-0.4
3,054,324	-		HGI48_RS13745	0.81	-0.5
3,054,343	+		HGI48_RS13745	0.82	+0.2
3,054,343	+		HGI48_RS13745	0.82	+0.1
3,054,344	-		HGI48_RS13745	0.82	+1.4
3,054,413	-		HGI48_RS13745	0.88	-0.2
3,054,413	-		HGI48_RS13745	0.88	-1.6
3,054,472	+				+1.4
3,054,473	-				-1.0
3,054,473	-				-0.3
3,054,545	+				-2.0
3,054,545	+				-0.0
3,054,546	-				-0.9
3,054,546	-				+0.0
3,054,546	-				-1.0
3,054,546	-				-0.4
3,054,546	-				+0.5
3,054,546	-				-0.1
3,054,564	+				+0.7
3,054,564	+				+0.5
3,054,564	+				+0.7
3,054,565	-				+0.3
3,054,565	-				-0.4
3,054,565	-				+0.6
3,054,688	-				-0.6
3,054,727	+				-2.0
3,054,728	-				-0.1
3,054,728	-				-0.2
3,054,728	-				-1.0
3,054,728	-				+0.4
3,054,803	-				-1.6
3,054,830	+				-0.4
3,054,898	+				-0.3
3,054,898	+				-0.6
3,054,899	-				-1.2
3,054,899	-				-0.4
3,054,906	+				-0.2
3,054,907	-				+0.1
3,054,907	-				+0.2
3,054,918	+				+0.4
3,054,918	+				-0.2
3,054,918	+				+1.8
3,054,918	+				-1.2
3,054,919	-				-0.2
3,054,919	-				-0.1
3,054,919	-				-0.1
3,055,074	+				+0.5
3,055,200	-				-0.4
3,055,243	+				-0.6
3,055,244	-				-1.6
3,055,268	+				-0.2
3,055,268	+				-0.4
3,055,269	-				-1.9
3,055,269	-				-1.4
3,055,270	+				-0.1
3,055,270	+				-0.2
3,055,270	+				-0.4
3,055,270	+				-1.0
3,055,270	+				+1.5
3,055,270	+				+0.1
3,055,270	+				-0.6
3,055,270	+				-1.2
3,055,270	+				+0.4
3,055,271	-				-1.1
3,055,271	-				-0.4
3,055,271	-				-0.2
3,055,271	-				+0.4
3,055,271	-				-1.2
3,055,271	-				-1.5
3,055,280	+				-0.6
3,055,328	+				-0.4
3,055,328	+				-1.6
3,055,328	+				-0.1
3,055,328	+				-2.2
3,055,329	-				-0.1
3,055,331	-				-0.2
3,055,331	-				-0.0
3,055,331	-				-0.6
3,055,331	-				-0.5
3,055,331	-				+0.9
3,055,346	+				+0.5
3,055,364	+				-0.6
3,055,364	+				-1.4
3,055,364	+				+0.6
3,055,365	-				-0.4
3,055,382	+				-1.0
3,055,400	+				-1.6
3,055,449	+				-0.3
3,055,449	+				-0.1
3,055,449	+				+0.5
3,055,449	+				-0.6
3,055,449	+				-0.5
3,055,450	-				-0.9
3,055,450	-				+0.0
3,055,450	-				-0.4
3,055,450	-				-0.2
3,055,450	-				-0.9
3,055,452	+				-0.6
3,055,532	+				-1.8
3,055,532	+				+1.9
3,055,532	+				-0.5
3,055,532	+				-2.0
3,055,533	-				-3.0
3,055,533	-				-1.0
3,055,533	-				-1.5
3,055,533	-				+2.4