Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS11365

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,474,268	-		HGI48_RS11355	0.82	+0.8
2,474,327	+		HGI48_RS11355	0.89	-1.0
2,474,336	+				+0.7
2,474,337	-				+1.6
2,474,339	+				-0.4
2,474,339	+				+0.4
2,474,340	-				-0.5
2,474,340	-				-0.9
2,474,340	-				+0.2
2,474,415	+				-2.0
2,474,416	-				+1.3
2,474,527	+		HGI48_RS11360	0.12	-1.1
2,474,529	+		HGI48_RS11360	0.12	-0.8
2,474,529	+		HGI48_RS11360	0.12	+1.3
2,474,529	+		HGI48_RS11360	0.12	+0.4
2,474,530	-		HGI48_RS11360	0.12	-2.1
2,474,530	-		HGI48_RS11360	0.12	-0.2
2,474,530	-		HGI48_RS11360	0.12	+1.1
2,474,530	-		HGI48_RS11360	0.12	-1.3
2,474,530	-		HGI48_RS11360	0.12	-0.4
2,474,530	-		HGI48_RS11360	0.12	-0.1
2,474,530	-				-1.3
2,474,557	+		HGI48_RS11360	0.17	-0.1
2,474,558	-				+0.3
2,474,659	+		HGI48_RS11360	0.36	-0.2
2,474,659	+		HGI48_RS11360	0.36	-0.1
2,474,727	+		HGI48_RS11360	0.48	-1.3
2,474,727	+		HGI48_RS11360	0.48	-0.7
2,474,793	+		HGI48_RS11360	0.60	-0.7
2,474,794	-		HGI48_RS11360	0.60	-0.2
2,474,818	+		HGI48_RS11360	0.65	-0.2
2,474,905	+		HGI48_RS11360	0.81	+0.8
2,474,905	+		HGI48_RS11360	0.81	-1.3
2,474,906	-		HGI48_RS11360	0.81	+0.3
2,474,906	-				+0.7
2,474,924	-		HGI48_RS11360	0.84	+0.3
2,474,968	+				-0.2
2,474,968	+				+1.3
2,474,968	+				-0.9
2,474,969	-				-0.7
2,475,003	+				-0.3
2,475,004	-				+0.7
2,475,064	+				-1.3
2,475,065	-				+0.1
2,475,072	+				-2.1
2,475,091	-				+1.0
2,475,091	-				-0.9
2,475,091	-				+0.7
2,475,091	-				-0.0
2,475,184	+				+0.4
2,475,191	+				-1.5
2,475,191	+				-0.9
2,475,191	+				-0.7
2,475,191	+				+0.3
2,475,191	+				-0.6
2,475,191	+				+2.1
2,475,192	-				-0.1
2,475,193	+				-0.7
2,475,193	+				+0.8
2,475,204	+				-0.5
2,475,251	-				-2.1
2,475,253	+				-2.3
2,475,253	+				-0.1
2,475,362	+		HGI48_RS11365	0.29	+0.9
2,475,362	+		HGI48_RS11365	0.29	-0.7
2,475,362	+		HGI48_RS11365	0.29	-1.2
2,475,362	+		HGI48_RS11365	0.29	-0.0
2,475,363	-				-1.3
2,475,363	-		HGI48_RS11365	0.29	+0.0
2,475,363	-		HGI48_RS11365	0.29	-0.5
2,475,363	-				-0.3
2,475,363	-		HGI48_RS11365	0.29	+0.1
2,475,363	-		HGI48_RS11365	0.29	+0.4
2,475,363	-		HGI48_RS11365	0.29	+0.3
2,475,363	-		HGI48_RS11365	0.29	-1.7
2,475,431	+		HGI48_RS11365	0.50	-0.7
2,475,431	+		HGI48_RS11365	0.50	-0.0
2,475,432	-		HGI48_RS11365	0.50	-0.0
2,475,432	-		HGI48_RS11365	0.50	+0.6
2,475,432	-		HGI48_RS11365	0.50	+0.8
2,475,432	-				+1.3
2,475,436	+		HGI48_RS11365	0.51	+0.2
2,475,508	+		HGI48_RS11365	0.73	-0.2
2,475,508	+				+0.3
2,475,509	-		HGI48_RS11365	0.73	-1.0
2,475,535	-		HGI48_RS11365	0.81	-0.2
2,475,582	+				+0.5
2,475,582	+				+0.1
2,475,587	+				-0.3
2,475,588	-				+0.9
2,475,609	-				-0.5
2,475,616	+				-1.7
2,475,616	+				+0.5
2,475,617	-				-0.5
2,475,657	+				-0.0
2,475,661	+				-2.3
2,475,662	-				+0.3
2,475,662	-				+1.3
2,475,668	-				-0.6
2,475,672	+				+1.1
2,475,672	+				-1.9
2,475,672	+				-0.2
2,475,672	+				-1.6
2,475,673	-				+0.7
2,475,673	-				-1.4
2,475,676	-				+0.3
2,475,703	+				+0.8
2,475,780	+				+0.6
2,475,793	+				+0.6
2,475,876	-				-1.1
2,475,876	-				-2.1
2,476,035	+		HGI48_RS11370	0.14	-1.8
2,476,035	+		HGI48_RS11370	0.14	+1.2
2,476,035	+		HGI48_RS11370	0.14	-2.0
2,476,036	-		HGI48_RS11370	0.14	+0.7
2,476,036	-		HGI48_RS11370	0.14	-1.0
2,476,120	+		HGI48_RS11370	0.24	-1.8
2,476,120	+				+0.2
2,476,121	-		HGI48_RS11370	0.24	-2.5
2,476,233	+		HGI48_RS11370	0.37	-1.8
2,476,233	+		HGI48_RS11370	0.37	-0.0
2,476,234	-		HGI48_RS11370	0.37	-1.8
2,476,234	-		HGI48_RS11370	0.37	-1.6
2,476,265	+		HGI48_RS11370	0.41	-1.3
2,476,266	-		HGI48_RS11370	0.41	-1.1
2,476,299	+		HGI48_RS11370	0.45	-0.0
2,476,299	+		HGI48_RS11370	0.45	+0.5
2,476,299	+		HGI48_RS11370	0.45	-0.6
2,476,302	+		HGI48_RS11370	0.46	-1.5
2,476,302	+		HGI48_RS11370	0.46	-0.0
2,476,303	-		HGI48_RS11370	0.46	-0.9
2,476,303	-		HGI48_RS11370	0.46	-0.8
2,476,303	-				+1.2
2,476,416	+		HGI48_RS11370	0.59	+0.2
2,476,416	+		HGI48_RS11370	0.59	+1.1
2,476,416	+		HGI48_RS11370	0.59	+0.0
2,476,416	+		HGI48_RS11370	0.59	+0.2
2,476,416	+		HGI48_RS11370	0.59	-2.1
2,476,417	-		HGI48_RS11370	0.59	-1.5
2,476,417	-		HGI48_RS11370	0.59	-0.5
2,476,417	-		HGI48_RS11370	0.59	-0.3
2,476,419	-		HGI48_RS11370	0.59	-1.0
2,476,419	-				-0.3
2,476,432	+		HGI48_RS11370	0.61	-0.1
2,476,432	+		HGI48_RS11370	0.61	-0.1
2,476,433	-		HGI48_RS11370	0.61	-1.0
2,476,433	-		HGI48_RS11370	0.61	-0.8
2,476,433	-				+1.2
2,476,433	-		HGI48_RS11370	0.61	-1.3
2,476,433	-		HGI48_RS11370	0.61	-0.6
2,476,435	+		HGI48_RS11370	0.61	+1.4
2,476,435	+		HGI48_RS11370	0.61	-0.2
2,476,435	+		HGI48_RS11370	0.61	+0.6
2,476,435	+		HGI48_RS11370	0.61	+0.2
2,476,435	+		HGI48_RS11370	0.61	+0.8
2,476,435	+		HGI48_RS11370	0.61	+0.4
2,476,435	+		HGI48_RS11370	0.61	+0.6
2,476,436	-		HGI48_RS11370	0.62	-0.8
2,476,436	-		HGI48_RS11370	0.62	+0.4
2,476,440	-		HGI48_RS11370	0.62	-0.3
2,476,451	+		HGI48_RS11370	0.63	-1.9
2,476,452	-		HGI48_RS11370	0.63	-0.1
2,476,455	-		HGI48_RS11370	0.64	-1.2
2,476,493	+		HGI48_RS11370	0.68	-0.8
2,476,493	+		HGI48_RS11370	0.68	-0.4
2,476,493	+		HGI48_RS11370	0.68	-0.0
2,476,494	-		HGI48_RS11370	0.68	-0.8
2,476,494	-		HGI48_RS11370	0.68	-2.7
2,476,533	+		HGI48_RS11370	0.73	-0.9
2,476,534	-		HGI48_RS11370	0.73	-0.5