Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS08030

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,724,610	+		HGI48_RS08025	0.23	-0.8
1,724,610	+		HGI48_RS08025	0.23	+0.1
1,724,610	+		HGI48_RS08025	0.23	+3.1
1,724,610	+		HGI48_RS08025	0.23	+0.1
1,724,610	+		HGI48_RS08025	0.23	-0.3
1,724,613	+		HGI48_RS08025	0.23	+1.3
1,724,614	-		HGI48_RS08025	0.23	-0.0
1,724,614	-		HGI48_RS08025	0.23	-0.6
1,724,703	+		HGI48_RS08025	0.33	+0.6
1,724,880	+		HGI48_RS08025	0.52	+0.5
1,724,880	+		HGI48_RS08025	0.52	-0.3
1,724,881	-		HGI48_RS08025	0.52	-1.8
1,724,883	+		HGI48_RS08025	0.52	+0.4
1,724,883	+				+1.1
1,724,883	+		HGI48_RS08025	0.52	-1.2
1,724,883	+		HGI48_RS08025	0.52	-1.9
1,724,883	+		HGI48_RS08025	0.52	+0.8
1,724,884	-		HGI48_RS08025	0.52	-0.0
1,725,066	+		HGI48_RS08025	0.72	-0.0
1,725,066	+		HGI48_RS08025	0.72	+0.1
1,725,067	-		HGI48_RS08025	0.72	-0.8
1,725,067	-		HGI48_RS08025	0.72	-0.3
1,725,069	-		HGI48_RS08025	0.72	-1.6
1,725,391	+				-0.3
1,725,391	+				-0.1
1,725,392	-				+0.1
1,725,392	-				+0.8
1,725,397	-				-0.8
1,725,404	+				+0.6
1,725,412	-				-1.2
1,725,502	+				-1.3
1,725,503	-				+0.4
1,725,511	+				+0.1
1,725,512	-				-2.2
1,725,522	+				+0.6
1,725,523	-				-1.9
1,725,523	-				-1.6
1,725,544	-				+0.1
1,725,544	-				-0.6
1,725,571	+				-0.6
1,725,571	+				+1.0
1,725,571	+				-1.9
1,725,572	-				-0.5
1,725,572	-				-0.6
1,725,572	-				-0.1
1,725,572	-				-0.3
1,725,572	-				+0.7
1,725,572	-				+1.0
1,725,572	-				-0.8
1,725,573	+				-0.4
1,725,573	+				+0.1
1,725,574	-				-1.2
1,725,574	-				+0.8
1,725,583	-				+0.1
1,725,588	+				+0.4
1,725,588	+				+1.5
1,725,589	-				+0.4
1,725,589	-				-1.6
1,725,589	-				+0.1
1,725,637	-				+0.2
1,725,651	+				-0.3
1,725,652	-				-0.0
1,725,724	+				-2.4
1,725,724	+				+0.6
1,725,798	+		HGI48_RS08030	0.14	-0.9
1,725,798	+		HGI48_RS08030	0.14	+1.3
1,725,798	+		HGI48_RS08030	0.14	-2.8
1,725,799	-				+0.8
1,725,799	-				+0.4
1,725,799	-		HGI48_RS08030	0.14	+0.1
1,725,931	+		HGI48_RS08030	0.23	-0.5
1,725,931	+		HGI48_RS08030	0.23	-1.5
1,725,985	+		HGI48_RS08030	0.26	+0.0
1,725,985	+		HGI48_RS08030	0.26	-0.3
1,725,985	+		HGI48_RS08030	0.26	-1.7
1,725,985	+		HGI48_RS08030	0.26	+0.1
1,725,986	-		HGI48_RS08030	0.26	+0.5
1,725,986	-		HGI48_RS08030	0.26	-1.2
1,725,987	+		HGI48_RS08030	0.26	-0.7
1,725,991	+		HGI48_RS08030	0.27	-0.8
1,725,991	+		HGI48_RS08030	0.27	-0.6
1,725,991	+		HGI48_RS08030	0.27	+0.9
1,725,992	-				+1.6
1,725,992	-				+1.1
1,725,992	-		HGI48_RS08030	0.27	-0.6
1,725,993	+		HGI48_RS08030	0.27	-0.6
1,725,993	+		HGI48_RS08030	0.27	-1.6
1,725,994	-		HGI48_RS08030	0.27	-1.6
1,725,994	-				-1.2
1,725,994	-		HGI48_RS08030	0.27	-0.8
1,725,994	-		HGI48_RS08030	0.27	-0.6
1,725,994	-		HGI48_RS08030	0.27	-0.8
1,726,012	+		HGI48_RS08030	0.28	-1.8
1,726,035	+				-1.2
1,726,036	-				-1.2
1,726,036	-		HGI48_RS08030	0.30	-0.2
1,726,038	+		HGI48_RS08030	0.30	+0.3
1,726,039	-		HGI48_RS08030	0.30	+0.1
1,726,049	+		HGI48_RS08030	0.30	+0.1
1,726,050	-		HGI48_RS08030	0.31	-0.8
1,726,050	-		HGI48_RS08030	0.31	-0.6
1,726,093	-		HGI48_RS08030	0.33	-2.8
1,726,167	+		HGI48_RS08030	0.38	-1.6
1,726,168	-		HGI48_RS08030	0.38	-2.2
1,726,168	-		HGI48_RS08030	0.38	-1.0
1,726,168	-		HGI48_RS08030	0.38	-1.6
1,726,171	+		HGI48_RS08030	0.38	-0.3
1,726,172	-		HGI48_RS08030	0.38	+0.4
1,726,172	-		HGI48_RS08030	0.38	+0.4
1,726,172	-		HGI48_RS08030	0.38	-0.2
1,726,179	+		HGI48_RS08030	0.39	-0.1
1,726,192	+		HGI48_RS08030	0.40	-1.6
1,726,207	+		HGI48_RS08030	0.41	+0.6
1,726,207	+				-0.6
1,726,276	+		HGI48_RS08030	0.45	-0.1
1,726,277	-		HGI48_RS08030	0.45	-1.9
1,726,278	+		HGI48_RS08030	0.45	-2.4
1,726,278	+		HGI48_RS08030	0.45	+0.6
1,726,278	+		HGI48_RS08030	0.45	+0.8
1,726,278	+		HGI48_RS08030	0.45	-0.6
1,726,278	+		HGI48_RS08030	0.45	-0.4
1,726,279	-		HGI48_RS08030	0.45	+0.2
1,726,279	-				-0.2
1,726,279	-		HGI48_RS08030	0.45	-1.6
1,726,282	-		HGI48_RS08030	0.45	-0.6
1,726,284	+		HGI48_RS08030	0.46	-0.1
1,726,285	-		HGI48_RS08030	0.46	-0.5
1,726,359	+		HGI48_RS08030	0.50	+0.4
1,726,359	+		HGI48_RS08030	0.50	-1.5
1,726,359	+		HGI48_RS08030	0.50	-1.5
1,726,360	-		HGI48_RS08030	0.50	-2.2
1,726,360	-		HGI48_RS08030	0.50	+0.1
1,726,360	-		HGI48_RS08030	0.50	-2.8
1,726,372	-		HGI48_RS08030	0.51	-0.0
1,726,372	-				+2.2
1,726,473	+		HGI48_RS08030	0.58	-1.6
1,726,473	+		HGI48_RS08030	0.58	-0.2
1,726,473	+		HGI48_RS08030	0.58	-0.0
1,726,489	-		HGI48_RS08030	0.59	-0.2
1,726,489	-		HGI48_RS08030	0.59	-0.6
1,726,494	+		HGI48_RS08030	0.59	+0.4
1,726,605	+		HGI48_RS08030	0.66	-1.1
1,726,605	+		HGI48_RS08030	0.66	-0.8
1,726,681	+		HGI48_RS08030	0.71	-1.6
1,726,681	+		HGI48_RS08030	0.71	-0.2
1,726,737	+		HGI48_RS08030	0.75	+1.4
1,726,737	+		HGI48_RS08030	0.75	-0.4
1,726,737	+		HGI48_RS08030	0.75	+0.7
1,726,738	-		HGI48_RS08030	0.75	+0.4
1,726,738	-		HGI48_RS08030	0.75	-0.7
1,726,765	+		HGI48_RS08030	0.76	-1.3
1,726,765	+		HGI48_RS08030	0.76	-0.7
1,726,766	-		HGI48_RS08030	0.76	-2.0
1,726,766	-		HGI48_RS08030	0.76	+0.1
1,726,777	+		HGI48_RS08030	0.77	-1.0
1,726,857	-		HGI48_RS08030	0.82	-0.0
1,726,890	+		HGI48_RS08030	0.84	+1.0
1,726,890	+				-0.2
1,726,891	-		HGI48_RS08030	0.84	-0.6
1,726,891	-		HGI48_RS08030	0.84	-1.3
1,726,952	+		HGI48_RS08030	0.88	-1.4
1,726,953	-		HGI48_RS08030	0.88	-0.3
1,727,023	+				+1.6
1,727,023	+				-0.6
1,727,024	-				-0.3
1,727,024	-				-1.0
1,727,052	+				+1.1
1,727,090	-				+0.8
1,727,090	-				-0.6
1,727,090	-				+0.9
1,727,188	+				-0.2
1,727,189	-				-1.3
1,727,214	-				-1.5
1,727,237	-				-0.0
1,727,438	+				-1.0
1,727,438	+				-0.3
1,727,618	+		HGI48_RS08035	0.30	-0.0
1,727,618	+		HGI48_RS08035	0.30	+1.4
1,727,618	+		HGI48_RS08035	0.30	-0.6
1,727,618	+		HGI48_RS08035	0.30	-1.5
1,727,618	+		HGI48_RS08035	0.30	-2.4
1,727,618	+		HGI48_RS08035	0.30	+0.2
1,727,618	+		HGI48_RS08035	0.30	-0.4
1,727,618	+		HGI48_RS08035	0.30	+0.1
1,727,619	-		HGI48_RS08035	0.30	+0.3
1,727,619	-		HGI48_RS08035	0.30	-0.3
1,727,619	-		HGI48_RS08035	0.30	+0.6
1,727,619	-		HGI48_RS08035	0.30	+0.7
1,727,619	-		HGI48_RS08035	0.30	-0.3
1,727,619	-		HGI48_RS08035	0.30	-0.4
1,727,619	-		HGI48_RS08035	0.30	-1.5
1,727,810	+		HGI48_RS08035	0.52	-0.3
1,727,810	+		HGI48_RS08035	0.52	-1.9
1,727,810	+				-1.2
1,727,811	-		HGI48_RS08035	0.53	-0.2
1,727,811	-		HGI48_RS08035	0.53	-0.1
1,727,811	-		HGI48_RS08035	0.53	+0.7
1,727,811	-		HGI48_RS08035	0.53	-0.9
1,727,870	+				-0.2
1,727,870	+		HGI48_RS08035	0.60	-1.6
1,727,870	+		HGI48_RS08035	0.60	+0.8
1,727,871	-		HGI48_RS08035	0.60	-0.4
1,727,871	-		HGI48_RS08035	0.60	-0.2
1,727,992	+		HGI48_RS08035	0.74	+3.6
1,728,043	+		HGI48_RS08035	0.80	-1.2
1,728,044	-		HGI48_RS08035	0.80	-0.5
1,728,116	+		HGI48_RS08035	0.89	-0.8
1,728,117	-				-0.6
1,728,117	-		HGI48_RS08035	0.89	+0.4
1,728,126	-				+0.4
1,728,126	-		HGI48_RS08035	0.90	-0.2