Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS06350

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,343,361	+		HGI48_RS06345	0.27	-0.6
1,343,416	+		HGI48_RS06345	0.31	+0.2
1,343,416	+		HGI48_RS06345	0.31	-2.4
1,343,416	+				-0.0
1,343,416	+		HGI48_RS06345	0.31	+0.1
1,343,416	+		HGI48_RS06345	0.31	+1.2
1,343,417	-		HGI48_RS06345	0.32	-0.8
1,343,645	+		HGI48_RS06345	0.50	+0.6
1,343,645	+		HGI48_RS06345	0.50	-0.2
1,343,645	+		HGI48_RS06345	0.50	+0.4
1,343,646	-				+0.6
1,343,646	-		HGI48_RS06345	0.50	-1.4
1,343,646	-		HGI48_RS06345	0.50	-0.4
1,343,673	+		HGI48_RS06345	0.52	+0.4
1,343,695	+		HGI48_RS06345	0.54	+0.8
1,343,695	+		HGI48_RS06345	0.54	+0.1
1,343,757	+		HGI48_RS06345	0.59	+0.8
1,343,757	+		HGI48_RS06345	0.59	+1.3
1,343,758	-		HGI48_RS06345	0.59	+0.4
1,343,758	-		HGI48_RS06345	0.59	+0.3
1,343,758	-		HGI48_RS06345	0.59	-0.9
1,343,758	-		HGI48_RS06345	0.59	+0.3
1,343,758	-		HGI48_RS06345	0.59	-1.2
1,343,758	-		HGI48_RS06345	0.59	-0.6
1,343,758	-		HGI48_RS06345	0.59	+1.2
1,343,758	-		HGI48_RS06345	0.59	-0.4
1,343,759	+		HGI48_RS06345	0.59	-0.8
1,343,759	+		HGI48_RS06345	0.59	-2.1
1,343,759	+		HGI48_RS06345	0.59	+1.0
1,343,759	+		HGI48_RS06345	0.59	-0.9
1,343,760	-		HGI48_RS06345	0.59	-1.1
1,343,760	-		HGI48_RS06345	0.59	-0.7
1,343,760	-				-0.0
1,343,760	-		HGI48_RS06345	0.59	+1.3
1,343,760	-		HGI48_RS06345	0.59	-0.7
1,343,760	-		HGI48_RS06345	0.59	+0.4
1,343,760	-		HGI48_RS06345	0.59	+0.5
1,343,760	-		HGI48_RS06345	0.59	+1.2
1,343,760	-		HGI48_RS06345	0.59	-1.2
1,343,760	-		HGI48_RS06345	0.59	+1.2
1,343,944	+		HGI48_RS06345	0.74	+0.8
1,343,945	-		HGI48_RS06345	0.74	+0.3
1,343,945	-		HGI48_RS06345	0.74	+1.7
1,343,945	-		HGI48_RS06345	0.74	+0.6
1,343,945	-		HGI48_RS06345	0.74	-0.1
1,343,945	-		HGI48_RS06345	0.74	-0.7
1,343,951	+		HGI48_RS06345	0.75	-0.4
1,343,951	+		HGI48_RS06345	0.75	-0.4
1,343,951	+		HGI48_RS06345	0.75	-0.4
1,343,951	+		HGI48_RS06345	0.75	+1.3
1,343,951	+		HGI48_RS06345	0.75	+0.3
1,343,951	+		HGI48_RS06345	0.75	+0.8
1,343,951	+		HGI48_RS06345	0.75	+0.6
1,343,952	-		HGI48_RS06345	0.75	-0.4
1,343,952	-		HGI48_RS06345	0.75	-0.0
1,343,952	-		HGI48_RS06345	0.75	-0.2
1,343,952	-		HGI48_RS06345	0.75	+0.1
1,343,952	-		HGI48_RS06345	0.75	-0.2
1,343,952	-		HGI48_RS06345	0.75	-0.4
1,343,952	-		HGI48_RS06345	0.75	-1.2
1,343,952	-		HGI48_RS06345	0.75	+0.1
1,343,954	-		HGI48_RS06345	0.75	+0.3
1,344,102	+		HGI48_RS06345	0.87	-0.7
1,344,272	+				-0.4
1,344,273	-				-0.2
1,344,278	+				+0.9
1,344,278	+				-0.1
1,344,278	+				-0.6
1,344,278	+				-0.2
1,344,279	-				-0.0
1,344,279	-				-0.6
1,344,283	+				-0.4
1,344,283	+				-0.4
1,344,283	+				-1.0
1,344,283	+				+0.4
1,344,284	-				-0.4
1,344,290	+				-0.8
1,344,290	+				-0.2
1,344,297	+				+0.9
1,344,327	+				-0.4
1,344,465	+		HGI48_RS06350	0.15	-1.6
1,344,478	+		HGI48_RS06350	0.16	-0.6
1,344,478	+		HGI48_RS06350	0.16	-0.1
1,344,478	+				-0.0
1,344,561	-		HGI48_RS06350	0.24	+0.4
1,344,563	+		HGI48_RS06350	0.24	+0.2
1,344,563	+		HGI48_RS06350	0.24	+0.2
1,344,563	+		HGI48_RS06350	0.24	-0.4
1,344,563	+		HGI48_RS06350	0.24	-1.2
1,344,563	+		HGI48_RS06350	0.24	+0.2
1,344,563	+				+1.6
1,344,563	+		HGI48_RS06350	0.24	-0.4
1,344,563	+		HGI48_RS06350	0.24	-1.4
1,344,563	+		HGI48_RS06350	0.24	+0.3
1,344,563	+		HGI48_RS06350	0.24	+0.9
1,344,563	+		HGI48_RS06350	0.24	-1.1
1,344,563	+		HGI48_RS06350	0.24	-0.1
1,344,563	+				-1.0
1,344,563	+		HGI48_RS06350	0.24	-0.2
1,344,563	+		HGI48_RS06350	0.24	-0.7
1,344,563	+		HGI48_RS06350	0.24	+0.8
1,344,563	+		HGI48_RS06350	0.24	-0.4
1,344,564	-		HGI48_RS06350	0.24	-0.4
1,344,564	-		HGI48_RS06350	0.24	+0.6
1,344,564	-		HGI48_RS06350	0.24	+1.3
1,344,564	-		HGI48_RS06350	0.24	-0.0
1,344,564	-		HGI48_RS06350	0.24	-0.6
1,344,564	-		HGI48_RS06350	0.24	-2.0
1,344,564	-		HGI48_RS06350	0.24	-0.4
1,344,564	-		HGI48_RS06350	0.24	-1.2
1,344,564	-		HGI48_RS06350	0.24	-0.9
1,344,564	-		HGI48_RS06350	0.24	+0.4
1,344,564	-		HGI48_RS06350	0.24	-0.7
1,344,564	-		HGI48_RS06350	0.24	-0.2
1,344,565	+		HGI48_RS06350	0.24	-1.7
1,344,565	+		HGI48_RS06350	0.24	+0.2
1,344,565	+		HGI48_RS06350	0.24	-0.4
1,344,565	+		HGI48_RS06350	0.24	+0.2
1,344,566	-		HGI48_RS06350	0.24	-1.0
1,344,566	-		HGI48_RS06350	0.24	-0.2
1,344,566	-		HGI48_RS06350	0.24	-0.2
1,344,566	-		HGI48_RS06350	0.24	-1.2
1,344,566	-		HGI48_RS06350	0.24	-0.7
1,344,566	-		HGI48_RS06350	0.24	+0.6
1,344,566	-		HGI48_RS06350	0.24	-0.2
1,344,566	-		HGI48_RS06350	0.24	-0.4
1,344,717	-		HGI48_RS06350	0.37	-0.6
1,344,717	-		HGI48_RS06350	0.37	-0.3
1,344,734	+		HGI48_RS06350	0.39	-0.6
1,344,734	+		HGI48_RS06350	0.39	+0.6
1,344,734	+		HGI48_RS06350	0.39	-2.1
1,344,734	+		HGI48_RS06350	0.39	+0.6
1,344,734	+		HGI48_RS06350	0.39	-0.7
1,344,735	-		HGI48_RS06350	0.39	-1.4
1,344,735	-		HGI48_RS06350	0.39	-1.0
1,344,739	-		HGI48_RS06350	0.39	-0.3
1,344,790	+		HGI48_RS06350	0.43	-0.2
1,344,790	+		HGI48_RS06350	0.43	-1.0
1,344,790	+		HGI48_RS06350	0.43	-1.2
1,344,790	+				+0.6
1,344,790	+		HGI48_RS06350	0.43	-2.0
1,344,790	+		HGI48_RS06350	0.43	-0.4
1,344,791	-		HGI48_RS06350	0.44	-1.4
1,344,791	-		HGI48_RS06350	0.44	-2.0
1,344,968	+		HGI48_RS06350	0.59	-1.0
1,344,968	+		HGI48_RS06350	0.59	-1.9
1,344,968	+		HGI48_RS06350	0.59	-1.2
1,344,968	+		HGI48_RS06350	0.59	-0.2
1,344,968	+		HGI48_RS06350	0.59	+0.0
1,344,969	-		HGI48_RS06350	0.59	-0.6
1,344,969	-		HGI48_RS06350	0.59	+0.3
1,344,969	-		HGI48_RS06350	0.59	-1.0
1,345,164	+		HGI48_RS06350	0.76	-1.4
1,345,436	+				-2.0
1,345,436	+				-0.7
1,345,436	+				-0.4
1,345,436	+				+1.1
1,345,436	+				+0.8
1,345,436	+				-1.0
1,345,437	-				-1.0
1,345,437	-				-0.9
1,345,437	-				-1.5
1,345,437	-				-1.7
1,345,437	-				+0.2
1,345,437	-				+1.2
1,345,437	-				+0.6
1,345,437	-				+0.9
1,345,437	-				-0.9
1,345,437	-				+1.3
1,345,442	+				-0.0
1,345,442	+				-0.2
1,345,442	+				+0.1
1,345,442	+				-0.4
1,345,442	+				+0.6
1,345,442	+				-0.3
1,345,442	+				+0.6
1,345,443	-				-1.5
1,345,443	-				-1.6
1,345,443	-				-0.7
1,345,443	-				+1.4
1,345,443	-				-1.0
1,345,443	-				-0.2
1,345,443	-				-1.2
1,345,443	-				-0.9
1,345,443	-				-1.1
1,345,443	-				-1.2
1,345,443	-				+0.6
1,345,443	-				-1.1
1,345,443	-				+1.9
1,345,443	-				-2.2
1,345,443	-				+0.6
1,345,444	+				-0.7
1,345,444	+				-0.4
1,345,445	-				-1.4
1,345,503	+				-0.2
1,345,503	+				-1.6
1,345,713	+		HGI48_RS06355	0.31	+0.3
1,345,713	+		HGI48_RS06355	0.31	-0.4
1,345,717	+		HGI48_RS06355	0.32	-0.7
1,345,789	+		HGI48_RS06355	0.41	-0.4
1,345,790	-		HGI48_RS06355	0.41	+1.0
1,345,995	+		HGI48_RS06355	0.66	+2.0
1,345,995	+		HGI48_RS06355	0.66	+1.0
1,346,043	+		HGI48_RS06355	0.72	-0.4
1,346,044	-		HGI48_RS06355	0.73	-0.1
1,346,044	-		HGI48_RS06355	0.73	-0.4
1,346,053	+		HGI48_RS06355	0.74	+0.6
1,346,054	-		HGI48_RS06355	0.74	+0.6
1,346,056	+		HGI48_RS06355	0.74	-0.8
1,346,098	-		HGI48_RS06355	0.79	+0.9
1,346,192	-				+0.1
1,346,208	+				+0.8
1,346,208	+				-0.4
1,346,300	+				-1.4
1,346,300	+				+1.2
1,346,301	-				-0.2
1,346,301	-				+1.6
1,346,301	-				+0.2
1,346,301	-				-0.0
1,346,324	+				+0.0
1,346,324	+				+0.3
1,346,325	-				+0.6
1,346,325	-				+0.1
1,346,340	+				-2.2
1,346,340	+				-0.0
1,346,340	+				-0.4
1,346,340	+				+0.3
1,346,341	-				-1.4
1,346,341	-				+1.2
1,346,341	-				-0.6
1,346,344	-				+1.6
1,346,344	-				+0.6
1,346,344	-				-0.4
1,346,419	-				+0.3
1,346,419	-				+0.3
1,346,431	+				-1.7
1,346,431	+				-1.7