Experiment: Norland
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HGI48_RS20010 and HGI48_RS20015 are separated by 222 nucleotides HGI48_RS20015 and HGI48_RS20020 are separated by 102 nucleotides
HGI48_RS20010: HGI48_RS20010 - phospholipase A, at 4,473,585 to 4,474,454
_RS20010
HGI48_RS20015: HGI48_RS20015 - thioesterase family protein, at 4,474,677 to 4,475,147
_RS20015
HGI48_RS20020: HGI48_RS20020 - EamA family transporter RarD, at 4,475,250 to 4,476,170
_RS20020
HGI48_RS20025: HGI48_RS20025 - AbrB family transcriptional regulator, at 4,476,129 to 4,477,187
_RS20025
Position (kb) 4474
4475
4476 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4473.752 kb on + strand, within HGI48_RS20010 at 4473.752 kb on + strand, within HGI48_RS20010 at 4473.752 kb on + strand, within HGI48_RS20010 at 4473.752 kb on + strand, within HGI48_RS20010 at 4473.752 kb on + strand, within HGI48_RS20010 at 4473.752 kb on + strand, within HGI48_RS20010 at 4473.752 kb on + strand at 4473.753 kb on - strand, within HGI48_RS20010 at 4473.753 kb on - strand, within HGI48_RS20010 at 4473.753 kb on - strand, within HGI48_RS20010 at 4473.753 kb on - strand, within HGI48_RS20010 at 4473.753 kb on - strand, within HGI48_RS20010 at 4473.754 kb on + strand, within HGI48_RS20010 at 4473.754 kb on + strand, within HGI48_RS20010 at 4473.754 kb on + strand, within HGI48_RS20010 at 4473.754 kb on + strand, within HGI48_RS20010 at 4473.755 kb on - strand, within HGI48_RS20010 at 4473.755 kb on - strand, within HGI48_RS20010 at 4473.779 kb on + strand, within HGI48_RS20010 at 4473.780 kb on - strand, within HGI48_RS20010 at 4473.793 kb on + strand, within HGI48_RS20010 at 4473.823 kb on + strand, within HGI48_RS20010 at 4473.824 kb on - strand, within HGI48_RS20010 at 4473.922 kb on + strand, within HGI48_RS20010 at 4473.922 kb on + strand, within HGI48_RS20010 at 4473.922 kb on + strand, within HGI48_RS20010 at 4473.923 kb on - strand, within HGI48_RS20010 at 4473.923 kb on - strand, within HGI48_RS20010 at 4473.999 kb on + strand, within HGI48_RS20010 at 4474.057 kb on + strand, within HGI48_RS20010 at 4474.057 kb on + strand, within HGI48_RS20010 at 4474.058 kb on - strand, within HGI48_RS20010 at 4474.123 kb on + strand, within HGI48_RS20010 at 4474.123 kb on + strand, within HGI48_RS20010 at 4474.123 kb on + strand at 4474.124 kb on - strand, within HGI48_RS20010 at 4474.124 kb on - strand, within HGI48_RS20010 at 4474.124 kb on - strand, within HGI48_RS20010 at 4474.124 kb on - strand, within HGI48_RS20010 at 4474.232 kb on - strand, within HGI48_RS20010 at 4474.251 kb on - strand, within HGI48_RS20010 at 4474.267 kb on + strand at 4474.267 kb on + strand, within HGI48_RS20010 at 4474.268 kb on - strand, within HGI48_RS20010 at 4474.268 kb on - strand, within HGI48_RS20010 at 4474.268 kb on - strand, within HGI48_RS20010 at 4474.268 kb on - strand, within HGI48_RS20010 at 4474.268 kb on - strand, within HGI48_RS20010 at 4474.268 kb on - strand, within HGI48_RS20010 at 4474.273 kb on + strand, within HGI48_RS20010 at 4474.273 kb on + strand, within HGI48_RS20010 at 4474.273 kb on + strand, within HGI48_RS20010 at 4474.273 kb on + strand, within HGI48_RS20010 at 4474.273 kb on + strand, within HGI48_RS20010 at 4474.282 kb on + strand at 4474.283 kb on - strand, within HGI48_RS20010 at 4474.283 kb on - strand, within HGI48_RS20010 at 4474.283 kb on - strand, within HGI48_RS20010 at 4474.283 kb on - strand, within HGI48_RS20010 at 4474.294 kb on + strand, within HGI48_RS20010 at 4474.294 kb on + strand, within HGI48_RS20010 at 4474.301 kb on - strand, within HGI48_RS20010 at 4474.346 kb on + strand, within HGI48_RS20010 at 4474.346 kb on + strand, within HGI48_RS20010 at 4474.346 kb on + strand, within HGI48_RS20010 at 4474.347 kb on - strand, within HGI48_RS20010 at 4474.347 kb on - strand, within HGI48_RS20010 at 4474.448 kb on + strand at 4474.448 kb on + strand at 4474.448 kb on + strand at 4474.448 kb on + strand at 4474.449 kb on - strand at 4474.449 kb on - strand at 4474.450 kb on + strand at 4474.450 kb on + strand at 4474.451 kb on - strand at 4474.451 kb on - strand at 4474.451 kb on - strand at 4474.451 kb on - strand at 4474.481 kb on + strand at 4474.481 kb on + strand at 4474.481 kb on + strand at 4474.484 kb on + strand at 4474.521 kb on + strand at 4474.526 kb on + strand at 4474.526 kb on + strand at 4474.526 kb on + strand at 4474.563 kb on + strand at 4474.563 kb on + strand at 4474.563 kb on + strand at 4474.563 kb on + strand at 4474.563 kb on + strand at 4474.564 kb on - strand at 4474.564 kb on - strand at 4474.564 kb on - strand at 4474.564 kb on - strand at 4474.565 kb on + strand at 4474.565 kb on + strand at 4474.592 kb on - strand at 4474.623 kb on - strand at 4474.623 kb on - strand at 4474.624 kb on + strand at 4474.682 kb on + strand at 4474.682 kb on + strand at 4474.682 kb on + strand at 4474.683 kb on - strand at 4474.683 kb on - strand at 4474.683 kb on - strand at 4474.683 kb on - strand at 4474.683 kb on - strand at 4474.685 kb on + strand at 4474.685 kb on + strand at 4474.685 kb on + strand at 4474.686 kb on - strand at 4474.686 kb on - strand at 4474.686 kb on - strand at 4474.686 kb on - strand at 4474.686 kb on - strand at 4474.708 kb on + strand at 4474.708 kb on + strand at 4474.708 kb on + strand at 4474.709 kb on - strand at 4474.709 kb on - strand at 4474.709 kb on - strand at 4474.709 kb on - strand at 4474.733 kb on + strand, within HGI48_RS20015 at 4474.733 kb on + strand, within HGI48_RS20015 at 4474.733 kb on + strand, within HGI48_RS20015 at 4474.737 kb on + strand, within HGI48_RS20015 at 4474.737 kb on + strand, within HGI48_RS20015 at 4474.737 kb on + strand, within HGI48_RS20015 at 4474.738 kb on - strand, within HGI48_RS20015 at 4474.805 kb on - strand, within HGI48_RS20015 at 4474.805 kb on - strand, within HGI48_RS20015 at 4475.001 kb on + strand at 4475.001 kb on + strand at 4475.090 kb on - strand, within HGI48_RS20015 at 4475.090 kb on - strand, within HGI48_RS20015 at 4475.090 kb on - strand, within HGI48_RS20015 at 4475.090 kb on - strand, within HGI48_RS20015 at 4475.094 kb on - strand, within HGI48_RS20015 at 4475.133 kb on + strand at 4475.133 kb on + strand at 4475.134 kb on - strand at 4475.134 kb on - strand at 4475.134 kb on - strand at 4475.134 kb on - strand at 4475.134 kb on - strand at 4475.170 kb on - strand at 4475.233 kb on + strand at 4475.245 kb on - strand at 4475.255 kb on + strand at 4475.255 kb on + strand at 4475.255 kb on + strand at 4475.255 kb on + strand at 4475.256 kb on - strand at 4475.256 kb on - strand at 4475.298 kb on + strand at 4475.298 kb on + strand at 4475.298 kb on + strand at 4475.298 kb on + strand at 4475.298 kb on + strand at 4475.299 kb on - strand at 4475.299 kb on - strand at 4475.299 kb on - strand at 4475.299 kb on - strand at 4475.299 kb on - strand at 4475.300 kb on + strand at 4475.300 kb on + strand at 4475.300 kb on + strand at 4475.301 kb on - strand at 4475.301 kb on - strand at 4475.301 kb on - strand at 4475.301 kb on - strand at 4475.301 kb on - strand at 4475.301 kb on - strand at 4475.379 kb on - strand, within HGI48_RS20020 at 4475.423 kb on + strand, within HGI48_RS20020 at 4475.517 kb on + strand, within HGI48_RS20020 at 4475.517 kb on + strand, within HGI48_RS20020 at 4475.517 kb on + strand, within HGI48_RS20020 at 4475.517 kb on + strand, within HGI48_RS20020 at 4475.518 kb on - strand, within HGI48_RS20020 at 4475.518 kb on - strand, within HGI48_RS20020 at 4475.518 kb on - strand, within HGI48_RS20020 at 4475.518 kb on - strand, within HGI48_RS20020 at 4475.518 kb on - strand, within HGI48_RS20020 at 4475.543 kb on + strand, within HGI48_RS20020 at 4475.543 kb on + strand, within HGI48_RS20020 at 4475.543 kb on + strand, within HGI48_RS20020 at 4475.544 kb on - strand, within HGI48_RS20020 at 4475.544 kb on - strand at 4475.544 kb on - strand, within HGI48_RS20020 at 4475.544 kb on - strand, within HGI48_RS20020 at 4475.544 kb on - strand, within HGI48_RS20020 at 4475.566 kb on - strand, within HGI48_RS20020 at 4475.566 kb on - strand, within HGI48_RS20020 at 4475.668 kb on + strand, within HGI48_RS20020 at 4475.739 kb on + strand, within HGI48_RS20020 at 4475.740 kb on - strand, within HGI48_RS20020 at 4475.740 kb on - strand, within HGI48_RS20020 at 4475.753 kb on + strand, within HGI48_RS20020 at 4475.826 kb on + strand, within HGI48_RS20020 at 4475.826 kb on + strand, within HGI48_RS20020 at 4475.940 kb on - strand, within HGI48_RS20020 at 4475.940 kb on - strand, within HGI48_RS20020 at 4475.970 kb on - strand at 4475.988 kb on + strand, within HGI48_RS20020 at 4475.988 kb on + strand, within HGI48_RS20020 at 4475.989 kb on - strand, within HGI48_RS20020 at 4476.004 kb on + strand at 4476.114 kb on + strand at 4476.114 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Norland remove 4,473,752 + HGI48_RS20010 0.19 +0.1 4,473,752 + HGI48_RS20010 0.19 +0.2 4,473,752 + HGI48_RS20010 0.19 -0.2 4,473,752 + HGI48_RS20010 0.19 -0.1 4,473,752 + HGI48_RS20010 0.19 -2.0 4,473,752 + HGI48_RS20010 0.19 -0.6 4,473,752 + +2.3 4,473,753 - HGI48_RS20010 0.19 -0.4 4,473,753 - HGI48_RS20010 0.19 -0.8 4,473,753 - HGI48_RS20010 0.19 -1.5 4,473,753 - HGI48_RS20010 0.19 -0.1 4,473,753 - HGI48_RS20010 0.19 +1.6 4,473,754 + HGI48_RS20010 0.19 +1.2 4,473,754 + HGI48_RS20010 0.19 -0.9 4,473,754 + HGI48_RS20010 0.19 -0.5 4,473,754 + HGI48_RS20010 0.19 +0.4 4,473,755 - HGI48_RS20010 0.20 -0.5 4,473,755 - HGI48_RS20010 0.20 -2.1 4,473,779 + HGI48_RS20010 0.22 +0.4 4,473,780 - HGI48_RS20010 0.22 +0.5 4,473,793 + HGI48_RS20010 0.24 -0.3 4,473,823 + HGI48_RS20010 0.27 -1.1 4,473,824 - HGI48_RS20010 0.27 -0.2 4,473,922 + HGI48_RS20010 0.39 -2.2 4,473,922 + HGI48_RS20010 0.39 -0.2 4,473,922 + HGI48_RS20010 0.39 -0.7 4,473,923 - HGI48_RS20010 0.39 +0.9 4,473,923 - HGI48_RS20010 0.39 +0.9 4,473,999 + HGI48_RS20010 0.48 -0.6 4,474,057 + HGI48_RS20010 0.54 +0.9 4,474,057 + HGI48_RS20010 0.54 +0.4 4,474,058 - HGI48_RS20010 0.54 -0.3 4,474,123 + HGI48_RS20010 0.62 +1.4 4,474,123 + HGI48_RS20010 0.62 +0.5 4,474,123 + -0.1 4,474,124 - HGI48_RS20010 0.62 +0.9 4,474,124 - HGI48_RS20010 0.62 -1.6 4,474,124 - HGI48_RS20010 0.62 +0.7 4,474,124 - HGI48_RS20010 0.62 +0.3 4,474,232 - HGI48_RS20010 0.74 -0.1 4,474,251 - HGI48_RS20010 0.77 +0.1 4,474,267 + +0.9 4,474,267 + HGI48_RS20010 0.78 -2.2 4,474,268 - HGI48_RS20010 0.79 +0.9 4,474,268 - HGI48_RS20010 0.79 -1.4 4,474,268 - HGI48_RS20010 0.79 -0.8 4,474,268 - HGI48_RS20010 0.79 -0.4 4,474,268 - HGI48_RS20010 0.79 -2.4 4,474,268 - HGI48_RS20010 0.79 -0.1 4,474,273 + HGI48_RS20010 0.79 -2.1 4,474,273 + HGI48_RS20010 0.79 +0.7 4,474,273 + HGI48_RS20010 0.79 -1.9 4,474,273 + HGI48_RS20010 0.79 -1.3 4,474,273 + HGI48_RS20010 0.79 -0.2 4,474,282 + -0.6 4,474,283 - HGI48_RS20010 0.80 -0.5 4,474,283 - HGI48_RS20010 0.80 +0.5 4,474,283 - HGI48_RS20010 0.80 +0.3 4,474,283 - HGI48_RS20010 0.80 +1.5 4,474,294 + HGI48_RS20010 0.81 -0.7 4,474,294 + HGI48_RS20010 0.81 +1.1 4,474,301 - HGI48_RS20010 0.82 -0.3 4,474,346 + HGI48_RS20010 0.87 -0.4 4,474,346 + HGI48_RS20010 0.87 -0.4 4,474,346 + HGI48_RS20010 0.87 -0.1 4,474,347 - HGI48_RS20010 0.88 +0.2 4,474,347 - HGI48_RS20010 0.88 +0.5 4,474,448 + +0.9 4,474,448 + -1.4 4,474,448 + -0.1 4,474,448 + +0.4 4,474,449 - -0.8 4,474,449 - -0.9 4,474,450 + +0.5 4,474,450 + +0.0 4,474,451 - -1.4 4,474,451 - +1.3 4,474,451 - -2.2 4,474,451 - -0.1 4,474,481 + -0.4 4,474,481 + +0.2 4,474,481 + +0.9 4,474,484 + +0.6 4,474,521 + -0.3 4,474,526 + +1.4 4,474,526 + -0.1 4,474,526 + +0.4 4,474,563 + -3.1 4,474,563 + +1.5 4,474,563 + -0.5 4,474,563 + -0.9 4,474,563 + -0.1 4,474,564 - -1.6 4,474,564 - -0.1 4,474,564 - +0.7 4,474,564 - -0.2 4,474,565 + -0.6 4,474,565 + -0.6 4,474,592 - +0.0 4,474,623 - -1.9 4,474,623 - -0.5 4,474,624 + -2.1 4,474,682 + -0.9 4,474,682 + -0.1 4,474,682 + +1.9 4,474,683 - +0.8 4,474,683 - -0.3 4,474,683 - -0.8 4,474,683 - +2.1 4,474,683 - +0.2 4,474,685 + +0.6 4,474,685 + +0.3 4,474,685 + +0.6 4,474,686 - +1.3 4,474,686 - +0.8 4,474,686 - -2.9 4,474,686 - +1.3 4,474,686 - -0.3 4,474,708 + -0.5 4,474,708 + -1.4 4,474,708 + +0.9 4,474,709 - -0.9 4,474,709 - -1.6 4,474,709 - +1.4 4,474,709 - -0.1 4,474,733 + HGI48_RS20015 0.12 -1.6 4,474,733 + HGI48_RS20015 0.12 -0.3 4,474,733 + HGI48_RS20015 0.12 -0.6 4,474,737 + HGI48_RS20015 0.13 +0.7 4,474,737 + HGI48_RS20015 0.13 -1.9 4,474,737 + HGI48_RS20015 0.13 -1.5 4,474,738 - HGI48_RS20015 0.13 -1.4 4,474,805 - HGI48_RS20015 0.27 -0.8 4,474,805 - HGI48_RS20015 0.27 -0.6 4,475,001 + -0.1 4,475,001 + +1.5 4,475,090 - HGI48_RS20015 0.88 -1.2 4,475,090 - HGI48_RS20015 0.88 -0.9 4,475,090 - HGI48_RS20015 0.88 +0.4 4,475,090 - HGI48_RS20015 0.88 -1.6 4,475,094 - HGI48_RS20015 0.89 -2.2 4,475,133 + +0.1 4,475,133 + -0.4 4,475,134 - +0.4 4,475,134 - -0.5 4,475,134 - -0.9 4,475,134 - -0.1 4,475,134 - -0.1 4,475,170 - -0.3 4,475,233 + +0.0 4,475,245 - -0.3 4,475,255 + -0.9 4,475,255 + +1.8 4,475,255 + -1.6 4,475,255 + -0.4 4,475,256 - -0.4 4,475,256 - -0.5 4,475,298 + -0.9 4,475,298 + -0.6 4,475,298 + +0.5 4,475,298 + -0.9 4,475,298 + +0.1 4,475,299 - +1.5 4,475,299 - +0.4 4,475,299 - -0.9 4,475,299 - -0.1 4,475,299 - +1.1 4,475,300 + +0.4 4,475,300 + -0.1 4,475,300 + -0.6 4,475,301 - -0.3 4,475,301 - -0.2 4,475,301 - -0.4 4,475,301 - +1.4 4,475,301 - -0.6 4,475,301 - -1.1 4,475,379 - HGI48_RS20020 0.14 +0.7 4,475,423 + HGI48_RS20020 0.19 +0.7 4,475,517 + HGI48_RS20020 0.29 -0.9 4,475,517 + HGI48_RS20020 0.29 -0.8 4,475,517 + HGI48_RS20020 0.29 -2.4 4,475,517 + HGI48_RS20020 0.29 -1.1 4,475,518 - HGI48_RS20020 0.29 +0.2 4,475,518 - HGI48_RS20020 0.29 -0.2 4,475,518 - HGI48_RS20020 0.29 -0.1 4,475,518 - HGI48_RS20020 0.29 -0.1 4,475,518 - HGI48_RS20020 0.29 +1.3 4,475,543 + HGI48_RS20020 0.32 +0.1 4,475,543 + HGI48_RS20020 0.32 -1.1 4,475,543 + HGI48_RS20020 0.32 -1.2 4,475,544 - HGI48_RS20020 0.32 +0.9 4,475,544 - -0.6 4,475,544 - HGI48_RS20020 0.32 +1.1 4,475,544 - HGI48_RS20020 0.32 -1.4 4,475,544 - HGI48_RS20020 0.32 -0.3 4,475,566 - HGI48_RS20020 0.34 -0.1 4,475,566 - HGI48_RS20020 0.34 -0.5 4,475,668 + HGI48_RS20020 0.45 +0.3 4,475,739 + HGI48_RS20020 0.53 -2.1 4,475,740 - HGI48_RS20020 0.53 +0.5 4,475,740 - HGI48_RS20020 0.53 +1.2 4,475,753 + HGI48_RS20020 0.55 +0.1 4,475,826 + HGI48_RS20020 0.63 -0.1 4,475,826 + HGI48_RS20020 0.63 +0.2 4,475,940 - HGI48_RS20020 0.75 -0.1 4,475,940 - HGI48_RS20020 0.75 -1.1 4,475,970 - +2.5 4,475,988 + HGI48_RS20020 0.80 -0.9 4,475,988 + HGI48_RS20020 0.80 +1.3 4,475,989 - HGI48_RS20020 0.80 -1.2 4,476,004 + -0.1 4,476,114 + +1.3 4,476,114 + -0.1
Or see this region's nucleotide sequence