Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS19695

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,395,648	+				+3.0
4,395,648	+		HGI48_RS19685	0.55	+1.1
4,395,648	+		HGI48_RS19685	0.55	-0.4
4,395,648	+				+0.3
4,395,649	-		HGI48_RS19685	0.55	+0.5
4,395,649	-		HGI48_RS19685	0.55	-0.5
4,395,731	+		HGI48_RS19685	0.61	-2.9
4,395,731	+		HGI48_RS19685	0.61	-0.1
4,395,731	+		HGI48_RS19685	0.61	-0.2
4,395,731	+		HGI48_RS19685	0.61	-1.1
4,395,731	+		HGI48_RS19685	0.61	-0.7
4,395,732	-		HGI48_RS19685	0.61	-0.9
4,395,732	-		HGI48_RS19685	0.61	+0.7
4,395,732	-		HGI48_RS19685	0.61	+0.4
4,395,732	-		HGI48_RS19685	0.61	-1.1
4,395,732	-		HGI48_RS19685	0.61	-0.0
4,395,732	-		HGI48_RS19685	0.61	+1.0
4,395,732	-		HGI48_RS19685	0.61	+0.7
4,395,732	-		HGI48_RS19685	0.61	-1.9
4,395,753	+				+1.9
4,395,754	-		HGI48_RS19685	0.63	-0.3
4,395,774	+		HGI48_RS19685	0.65	-0.6
4,395,775	-		HGI48_RS19685	0.65	-0.3
4,395,805	-		HGI48_RS19685	0.67	-0.3
4,395,807	+		HGI48_RS19685	0.67	+0.6
4,395,807	+		HGI48_RS19685	0.67	-0.0
4,395,807	+		HGI48_RS19685	0.67	-0.2
4,395,807	+		HGI48_RS19685	0.67	+0.9
4,395,807	+		HGI48_RS19685	0.67	+0.3
4,395,808	-		HGI48_RS19685	0.67	-0.3
4,395,808	-		HGI48_RS19685	0.67	-1.1
4,395,808	-		HGI48_RS19685	0.67	-0.1
4,395,808	-				+0.9
4,395,808	-		HGI48_RS19685	0.67	-0.9
4,395,914	+		HGI48_RS19685	0.75	+1.4
4,395,914	+				-0.7
4,395,914	+		HGI48_RS19685	0.75	-0.3
4,395,915	-		HGI48_RS19685	0.75	-1.1
4,395,915	-		HGI48_RS19685	0.75	-0.1
4,395,915	-		HGI48_RS19685	0.75	-0.1
4,395,916	+		HGI48_RS19685	0.75	-0.1
4,395,916	+		HGI48_RS19685	0.75	-1.1
4,395,916	+		HGI48_RS19685	0.75	+0.3
4,395,916	+		HGI48_RS19685	0.75	+1.1
4,395,916	+		HGI48_RS19685	0.75	+0.2
4,395,916	+		HGI48_RS19685	0.75	+1.1
4,395,917	-		HGI48_RS19685	0.76	-1.7
4,395,917	-		HGI48_RS19685	0.76	-1.9
4,395,917	-		HGI48_RS19685	0.76	-2.1
4,395,917	-		HGI48_RS19685	0.76	-1.1
4,395,917	-		HGI48_RS19685	0.76	-0.9
4,395,917	-		HGI48_RS19685	0.76	-0.1
4,395,917	-		HGI48_RS19685	0.76	+0.5
4,395,929	-		HGI48_RS19685	0.76	-0.7
4,395,983	+		HGI48_RS19685	0.81	+2.2
4,395,983	+		HGI48_RS19685	0.81	+0.1
4,395,983	+		HGI48_RS19685	0.81	-3.0
4,395,983	+		HGI48_RS19685	0.81	-0.3
4,395,984	-		HGI48_RS19685	0.81	-1.9
4,395,984	-		HGI48_RS19685	0.81	+0.1
4,395,986	+		HGI48_RS19685	0.81	-1.4
4,395,986	+		HGI48_RS19685	0.81	+0.2
4,395,987	-		HGI48_RS19685	0.81	-0.4
4,396,064	+		HGI48_RS19685	0.87	-0.1
4,396,065	-		HGI48_RS19685	0.87	-1.1
4,396,065	-		HGI48_RS19685	0.87	-0.2
4,396,385	-		HGI48_RS19690	0.37	-0.1
4,396,490	+		HGI48_RS19690	0.66	-0.6
4,396,686	+		HGI48_RS19695	0.14	-0.2
4,396,686	+		HGI48_RS19695	0.14	-0.3
4,396,686	+		HGI48_RS19695	0.14	+0.9
4,396,686	+		HGI48_RS19695	0.14	-1.1
4,396,686	+		HGI48_RS19695	0.14	-1.0
4,396,687	-		HGI48_RS19695	0.15	-2.1
4,396,687	-		HGI48_RS19695	0.15	+0.6
4,396,687	-		HGI48_RS19695	0.15	-1.1
4,396,687	-		HGI48_RS19695	0.15	-0.1
4,396,687	-		HGI48_RS19695	0.15	-1.1
4,396,687	-		HGI48_RS19695	0.15	-1.4
4,396,751	+		HGI48_RS19695	0.26	-0.4
4,396,752	-		HGI48_RS19695	0.26	+0.5
4,396,752	-		HGI48_RS19695	0.26	+0.6
4,396,752	-		HGI48_RS19695	0.26	-0.7
4,396,834	+		HGI48_RS19695	0.41	-1.1
4,396,835	-		HGI48_RS19695	0.41	-1.1
4,397,017	+		HGI48_RS19695	0.74	-0.4
4,397,017	+		HGI48_RS19695	0.74	-0.5
4,397,018	-		HGI48_RS19695	0.75	+1.4
4,397,018	-		HGI48_RS19695	0.75	+0.3
4,397,098	+		HGI48_RS19695	0.89	+0.0
4,397,099	-		HGI48_RS19695	0.89	+0.3
4,397,195	-				+1.5
4,397,195	-				-1.9
4,397,222	+				+0.9
4,397,222	+		HGI48_RS19700	0.12	-1.2
4,397,222	+		HGI48_RS19700	0.12	+0.2
4,397,222	+		HGI48_RS19700	0.12	+0.5
4,397,254	-		HGI48_RS19700	0.17	+1.7
4,397,268	+		HGI48_RS19700	0.20	+0.7
4,397,268	+		HGI48_RS19700	0.20	-0.4
4,397,268	+		HGI48_RS19700	0.20	-0.5
4,397,268	+		HGI48_RS19700	0.20	-0.1
4,397,277	+		HGI48_RS19700	0.21	-0.3
4,397,593	+		HGI48_RS19700	0.78	-0.2
4,397,674	+				+0.2
4,397,676	+				+0.6
4,397,676	+				-1.9
4,397,676	+				-0.3
4,397,676	+				+0.4
4,397,676	+				-1.3
4,397,723	-				-1.1
4,397,854	-		HGI48_RS19705	0.15	-0.4
4,397,896	+		HGI48_RS19705	0.20	-1.0
4,397,897	-		HGI48_RS19705	0.20	-0.4
4,397,911	+		HGI48_RS19705	0.22	-0.1
4,397,912	-		HGI48_RS19705	0.22	-1.1
4,397,912	-		HGI48_RS19705	0.22	-1.7
4,397,919	+		HGI48_RS19705	0.23	-0.3
4,397,920	-		HGI48_RS19705	0.23	-1.4
4,397,920	-				+1.9
4,397,920	-		HGI48_RS19705	0.23	-1.7
4,397,920	-		HGI48_RS19705	0.23	+0.3
4,397,927	+		HGI48_RS19705	0.23	-1.1
4,397,927	+		HGI48_RS19705	0.23	-2.1
4,397,928	-		HGI48_RS19705	0.23	-1.1
4,397,971	+		HGI48_RS19705	0.28	+0.4
4,397,972	-		HGI48_RS19705	0.28	-0.4
4,397,984	-		HGI48_RS19705	0.30	+0.4
4,397,984	-		HGI48_RS19705	0.30	-1.4
4,398,009	+				-0.7
4,398,009	+		HGI48_RS19705	0.32	+0.1
4,398,010	-		HGI48_RS19705	0.32	+0.3
4,398,010	-		HGI48_RS19705	0.32	+0.4
4,398,010	-		HGI48_RS19705	0.32	+0.5
4,398,154	+		HGI48_RS19705	0.48	-0.3
4,398,154	+		HGI48_RS19705	0.48	-1.9
4,398,154	+		HGI48_RS19705	0.48	-2.1
4,398,155	-		HGI48_RS19705	0.48	-1.4
4,398,155	-		HGI48_RS19705	0.48	-0.1
4,398,155	-		HGI48_RS19705	0.48	-0.3
4,398,155	-				+2.5
4,398,155	-		HGI48_RS19705	0.48	-0.1
4,398,157	+		HGI48_RS19705	0.48	+0.5