Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS19625

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,380,483	+		HGI48_RS19620	0.68	+0.2
4,380,483	+		HGI48_RS19620	0.68	+0.1
4,380,483	+		HGI48_RS19620	0.68	-1.0
4,380,484	-		HGI48_RS19620	0.68	-1.4
4,380,484	-				-0.1
4,380,494	+				+0.3
4,380,494	+		HGI48_RS19620	0.69	+2.1
4,380,494	+		HGI48_RS19620	0.69	-0.1
4,380,495	-		HGI48_RS19620	0.69	-0.7
4,380,663	-		HGI48_RS19620	0.81	-0.7
4,380,665	+		HGI48_RS19620	0.81	-0.4
4,380,665	+		HGI48_RS19620	0.81	-0.1
4,380,666	-		HGI48_RS19620	0.81	-0.5
4,380,666	-		HGI48_RS19620	0.81	+0.2
4,380,699	+		HGI48_RS19620	0.84	+0.3
4,380,700	-		HGI48_RS19620	0.84	-0.7
4,380,707	+		HGI48_RS19620	0.84	+0.5
4,381,045	+				-1.4
4,381,045	+				-0.4
4,381,046	-				+0.4
4,381,046	-				-0.5
4,381,053	+				+0.6
4,381,054	-				+0.5
4,381,122	+				-0.1
4,381,122	+				-0.1
4,381,273	+				-0.3
4,381,273	+				-0.2
4,381,273	+				+0.3
4,381,274	-				+1.5
4,381,274	-				-1.7
4,381,274	-				+0.5
4,381,274	-				+0.7
4,381,296	+				-2.1
4,381,296	+				+2.7
4,381,296	+				+0.1
4,381,296	+				-0.5
4,381,296	+				-0.5
4,381,296	+				-0.1
4,381,297	-				+1.3
4,381,297	-				+1.6
4,381,297	-				+0.5
4,381,297	-				-0.7
4,381,297	-				+0.3
4,381,297	-				+0.3
4,381,416	-				+0.5
4,381,416	-				-0.5
4,381,418	+				+0.6
4,381,418	+				-1.4
4,381,613	-		HGI48_RS19625	0.21	-0.1
4,381,613	-		HGI48_RS19625	0.21	-1.7
4,381,613	-		HGI48_RS19625	0.21	-1.3
4,381,613	-				-0.1
4,381,613	-		HGI48_RS19625	0.21	+0.1
4,381,614	+		HGI48_RS19625	0.21	-0.3
4,381,656	+		HGI48_RS19625	0.24	-1.7
4,381,657	-		HGI48_RS19625	0.24	-0.1
4,381,657	-		HGI48_RS19625	0.24	-0.0
4,381,692	-		HGI48_RS19625	0.28	+0.6
4,381,790	+		HGI48_RS19625	0.36	-0.1
4,381,990	+		HGI48_RS19625	0.54	-0.4
4,381,990	+		HGI48_RS19625	0.54	-2.5
4,381,990	+		HGI48_RS19625	0.54	+1.4
4,381,990	+		HGI48_RS19625	0.54	-0.5
4,381,990	+		HGI48_RS19625	0.54	-0.5
4,381,990	+		HGI48_RS19625	0.54	-1.1
4,381,990	+		HGI48_RS19625	0.54	+0.4
4,381,991	-		HGI48_RS19625	0.54	+0.3
4,381,996	+		HGI48_RS19625	0.55	-0.1
4,381,996	+		HGI48_RS19625	0.55	+1.2
4,381,996	+		HGI48_RS19625	0.55	-0.5
4,381,996	+		HGI48_RS19625	0.55	+1.2
4,381,996	+		HGI48_RS19625	0.55	-1.1
4,381,997	-		HGI48_RS19625	0.55	-1.4
4,381,997	-		HGI48_RS19625	0.55	-1.4
4,381,997	-		HGI48_RS19625	0.55	-2.7
4,382,059	-		HGI48_RS19625	0.60	-1.3
4,382,061	+		HGI48_RS19625	0.60	-0.3
4,382,061	+		HGI48_RS19625	0.60	-0.4
4,382,061	+		HGI48_RS19625	0.60	-1.0
4,382,062	-		HGI48_RS19625	0.60	+0.6
4,382,062	-		HGI48_RS19625	0.60	+0.3
4,382,062	-		HGI48_RS19625	0.60	+0.2
4,382,062	-		HGI48_RS19625	0.60	+0.3
4,382,062	-		HGI48_RS19625	0.60	+0.1
4,382,062	-		HGI48_RS19625	0.60	-1.4
4,382,065	+		HGI48_RS19625	0.61	-1.7
4,382,065	+		HGI48_RS19625	0.61	-0.7
4,382,065	+		HGI48_RS19625	0.61	-0.7
4,382,066	-		HGI48_RS19625	0.61	-0.4
4,382,066	-		HGI48_RS19625	0.61	-0.6
4,382,073	+		HGI48_RS19625	0.61	+0.3
4,382,073	+		HGI48_RS19625	0.61	-1.7
4,382,073	+		HGI48_RS19625	0.61	-0.5
4,382,073	+		HGI48_RS19625	0.61	+0.0
4,382,073	+		HGI48_RS19625	0.61	+0.5
4,382,077	+		HGI48_RS19625	0.62	-0.7
4,382,077	+		HGI48_RS19625	0.62	+1.9
4,382,078	-		HGI48_RS19625	0.62	+0.1
4,382,078	-		HGI48_RS19625	0.62	-0.1
4,382,078	-		HGI48_RS19625	0.62	+0.1
4,382,078	-		HGI48_RS19625	0.62	-1.7
4,382,078	-		HGI48_RS19625	0.62	+0.3
4,382,078	-		HGI48_RS19625	0.62	-1.1
4,382,080	+		HGI48_RS19625	0.62	-0.1
4,382,080	+		HGI48_RS19625	0.62	-0.0
4,382,080	+		HGI48_RS19625	0.62	-0.9
4,382,080	+		HGI48_RS19625	0.62	-0.7
4,382,080	+		HGI48_RS19625	0.62	+1.1
4,382,080	+		HGI48_RS19625	0.62	-0.7
4,382,081	-		HGI48_RS19625	0.62	+0.4
4,382,081	-		HGI48_RS19625	0.62	+0.9
4,382,081	-		HGI48_RS19625	0.62	+0.2
4,382,081	-		HGI48_RS19625	0.62	-0.0
4,382,135	-		HGI48_RS19625	0.67	+0.2
4,382,135	-		HGI48_RS19625	0.67	+0.3
4,382,146	+		HGI48_RS19625	0.68	-1.7
4,382,146	+		HGI48_RS19625	0.68	-1.9
4,382,146	+		HGI48_RS19625	0.68	-0.2
4,382,146	+		HGI48_RS19625	0.68	+0.2
4,382,146	+		HGI48_RS19625	0.68	-0.9
4,382,147	-				+0.3
4,382,147	-		HGI48_RS19625	0.68	+0.9
4,382,147	-		HGI48_RS19625	0.68	-0.4
4,382,148	+		HGI48_RS19625	0.68	-0.8
4,382,148	+		HGI48_RS19625	0.68	-0.1
4,382,149	-		HGI48_RS19625	0.68	+0.1
4,382,149	-		HGI48_RS19625	0.68	-0.1
4,382,149	-		HGI48_RS19625	0.68	+0.8
4,382,316	+		HGI48_RS19625	0.83	-0.9
4,382,317	-		HGI48_RS19625	0.83	+2.6
4,382,317	-				-0.1
4,382,317	-		HGI48_RS19625	0.83	+1.9
4,382,320	+		HGI48_RS19625	0.83	+1.1
4,382,320	+		HGI48_RS19625	0.83	-0.7
4,382,320	+		HGI48_RS19625	0.83	+0.1
4,382,320	+		HGI48_RS19625	0.83	-0.8
4,382,321	-		HGI48_RS19625	0.83	-1.2
4,382,321	-		HGI48_RS19625	0.83	+0.3
4,382,353	+		HGI48_RS19625	0.86	+0.2
4,382,353	+		HGI48_RS19625	0.86	-1.4
4,382,354	-		HGI48_RS19625	0.86	-0.8
4,382,385	+		HGI48_RS19625	0.89	-1.4
4,382,386	-				+2.7
4,382,404	+				+1.2
4,382,404	+				+0.2
4,382,410	+				+2.2
4,382,410	+				-0.1
4,382,411	-				-1.7
4,382,411	-				-0.5
4,382,411	-				-0.3
4,382,451	+				-0.1
4,382,455	+				-0.4
4,382,455	+				-0.2
4,382,456	-				+0.5
4,382,456	-				+0.5
4,382,456	-				-0.6
4,382,456	-				-0.1
4,382,502	+				-1.1
4,382,502	+				+0.6
4,382,503	-				+0.1
4,382,507	-				+0.2
4,382,596	+				-0.7
4,382,615	-				+0.9
4,382,615	-				-0.7
4,382,656	+				-1.4
4,382,659	+				+0.5
4,382,664	+				-1.1
4,382,665	-				-2.2
4,382,692	-				-1.1
4,382,692	-				+0.5
4,382,727	+				+1.6
4,382,727	+				+0.3
4,382,727	+				+0.3
4,382,728	-				+0.2
4,382,728	-				-0.0
4,382,741	-				+1.1
4,382,784	-				+0.5
4,382,784	-				-0.3
4,382,787	+				-0.8
4,382,788	-				-0.3
4,382,788	-				+0.9
4,382,794	+				+0.0
4,382,794	+				+0.3
4,382,844	-				-0.8
4,382,847	+				-0.2
4,382,848	-				+1.5
4,382,901	-				+0.3
4,382,937	+				-1.2
4,382,937	+				+0.2
4,382,937	+				-1.7
4,382,938	-				-0.1
4,382,941	+				+0.1
4,382,941	+				+0.2
4,382,941	+				-0.1
4,382,941	+				-1.0
4,382,941	+				-1.4
4,382,942	-				-1.9
4,382,942	-				-0.3
4,382,942	-				-2.3
4,382,942	-				-0.1
4,382,942	-				+1.0
4,382,942	-				+0.5
4,382,946	-				+0.2
4,382,956	+				-0.2
4,382,980	+				+0.9
4,382,980	+				-0.3
4,382,981	-				+0.2
4,382,981	-				-1.0
4,383,013	-				-0.1
4,383,031	+				+0.2
4,383,031	+				+0.5
4,383,031	+				-1.3
4,383,031	+				+0.3
4,383,031	+				+0.9
4,383,031	+				-0.5
4,383,032	-				-2.5
4,383,032	-				-0.4
4,383,032	-				-0.1
4,383,032	-				-1.7
4,383,032	-				+0.3
4,383,032	-				+0.5
4,383,032	-				-1.7
4,383,051	+				-0.5
4,383,052	-				-1.1
4,383,052	-				-0.1
4,383,052	-				-1.4
4,383,176	+				+0.7
4,383,177	-				-1.2
4,383,211	+		HGI48_RS19630	0.10	+0.5
4,383,240	-		HGI48_RS19630	0.13	-0.3
4,383,240	-		HGI48_RS19630	0.13	+1.1
4,383,291	-		HGI48_RS19630	0.18	-1.1
4,383,317	+		HGI48_RS19630	0.20	-2.7
4,383,317	+		HGI48_RS19630	0.20	+0.3
4,383,317	+		HGI48_RS19630	0.20	-0.9
4,383,318	-		HGI48_RS19630	0.20	+0.9
4,383,321	+		HGI48_RS19630	0.20	-0.9
4,383,321	+		HGI48_RS19630	0.20	-0.1
4,383,321	+		HGI48_RS19630	0.20	+1.5
4,383,321	+		HGI48_RS19630	0.20	-0.7
4,383,321	+		HGI48_RS19630	0.20	-0.2
4,383,321	+		HGI48_RS19630	0.20	-1.4
4,383,321	+		HGI48_RS19630	0.20	-0.4
4,383,321	+		HGI48_RS19630	0.20	+0.0
4,383,321	+		HGI48_RS19630	0.20	+1.5
4,383,322	-		HGI48_RS19630	0.20	-0.1
4,383,322	-		HGI48_RS19630	0.20	+0.3
4,383,322	-		HGI48_RS19630	0.20	+0.2
4,383,322	-		HGI48_RS19630	0.20	+0.5
4,383,322	-		HGI48_RS19630	0.20	+0.8
4,383,459	-		HGI48_RS19630	0.32	-1.1
4,383,497	-		HGI48_RS19630	0.36	-1.1
4,383,499	+		HGI48_RS19630	0.36	-1.8