Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS19620

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,378,596	+				+1.1
4,378,597	-				+0.6
4,378,646	+		HGI48_RS19615	0.12	-0.7
4,378,647	-		HGI48_RS19615	0.12	+0.4
4,378,647	-		HGI48_RS19615	0.12	+1.3
4,378,714	+				+0.3
4,378,715	-		HGI48_RS19615	0.19	+0.4
4,378,715	-		HGI48_RS19615	0.19	-1.1
4,378,733	+		HGI48_RS19615	0.21	+0.5
4,378,733	+				+0.9
4,378,754	-		HGI48_RS19615	0.23	+0.6
4,378,862	+		HGI48_RS19615	0.33	-0.1
4,378,876	+		HGI48_RS19615	0.35	-1.5
4,378,877	-		HGI48_RS19615	0.35	+0.1
4,378,877	-		HGI48_RS19615	0.35	-0.8
4,378,879	+		HGI48_RS19615	0.35	-0.3
4,378,879	+		HGI48_RS19615	0.35	-1.0
4,378,879	+		HGI48_RS19615	0.35	-0.1
4,378,879	+		HGI48_RS19615	0.35	-2.1
4,378,879	+		HGI48_RS19615	0.35	-0.1
4,378,879	+		HGI48_RS19615	0.35	+0.3
4,378,880	-		HGI48_RS19615	0.35	+0.1
4,378,880	-		HGI48_RS19615	0.35	-1.1
4,378,902	+		HGI48_RS19615	0.37	-1.3
4,378,903	-		HGI48_RS19615	0.37	-0.8
4,378,903	-		HGI48_RS19615	0.37	+0.7
4,378,944	+		HGI48_RS19615	0.41	-1.7
4,378,945	-		HGI48_RS19615	0.41	-0.2
4,378,945	-				+0.9
4,379,033	+				+0.9
4,379,034	-		HGI48_RS19615	0.50	+0.7
4,379,044	+		HGI48_RS19615	0.51	-0.5
4,379,044	+				+1.5
4,379,045	-		HGI48_RS19615	0.51	-1.1
4,379,045	-		HGI48_RS19615	0.51	-1.2
4,379,052	+		HGI48_RS19615	0.52	+0.5
4,379,052	+		HGI48_RS19615	0.52	-0.2
4,379,052	+		HGI48_RS19615	0.52	+1.1
4,379,052	+		HGI48_RS19615	0.52	-0.2
4,379,052	+		HGI48_RS19615	0.52	-1.1
4,379,052	+		HGI48_RS19615	0.52	-0.1
4,379,053	-		HGI48_RS19615	0.52	+1.4
4,379,053	-		HGI48_RS19615	0.52	+0.6
4,379,054	+		HGI48_RS19615	0.52	-0.9
4,379,054	+		HGI48_RS19615	0.52	-2.8
4,379,081	+		HGI48_RS19615	0.55	-0.2
4,379,084	-		HGI48_RS19615	0.55	+0.6
4,379,182	+		HGI48_RS19615	0.64	+0.6
4,379,182	+		HGI48_RS19615	0.64	-0.1
4,379,182	+		HGI48_RS19615	0.64	-1.7
4,379,182	+		HGI48_RS19615	0.64	-0.4
4,379,182	+		HGI48_RS19615	0.64	-0.4
4,379,183	-		HGI48_RS19615	0.64	-0.4
4,379,220	-		HGI48_RS19615	0.68	+0.2
4,379,274	+				+2.2
4,379,274	+		HGI48_RS19615	0.73	+0.9
4,379,275	-		HGI48_RS19615	0.73	+1.1
4,379,307	-				-0.7
4,379,389	+		HGI48_RS19615	0.84	+0.4
4,379,389	+		HGI48_RS19615	0.84	-0.5
4,379,389	+		HGI48_RS19615	0.84	-0.7
4,379,390	-		HGI48_RS19615	0.84	-0.9
4,379,390	-				+0.9
4,379,390	-		HGI48_RS19615	0.84	+0.4
4,379,390	-		HGI48_RS19615	0.84	-0.4
4,379,390	-		HGI48_RS19615	0.84	-0.0
4,379,390	-				+0.3
4,379,390	-		HGI48_RS19615	0.84	+0.9
4,379,390	-		HGI48_RS19615	0.84	-0.6
4,379,416	+		HGI48_RS19615	0.87	-0.1
4,379,423	+		HGI48_RS19615	0.88	+0.1
4,379,423	+		HGI48_RS19615	0.88	+0.5
4,379,423	+		HGI48_RS19615	0.88	-0.8
4,379,423	+		HGI48_RS19615	0.88	+0.7
4,379,423	+		HGI48_RS19615	0.88	-1.7
4,379,423	+		HGI48_RS19615	0.88	+0.6
4,379,424	-		HGI48_RS19615	0.88	-0.1
4,379,424	-		HGI48_RS19615	0.88	+1.5
4,379,429	+		HGI48_RS19615	0.88	-1.7
4,379,430	-		HGI48_RS19615	0.88	+0.6
4,379,430	-		HGI48_RS19615	0.88	-0.1
4,379,638	+				-0.8
4,379,638	+				-1.9
4,379,638	+				+0.3
4,379,835	-		HGI48_RS19620	0.21	+0.0
4,379,842	+		HGI48_RS19620	0.21	-2.3
4,379,842	+		HGI48_RS19620	0.21	-0.7
4,379,842	+		HGI48_RS19620	0.21	+0.4
4,379,969	+		HGI48_RS19620	0.30	-0.9
4,379,969	+		HGI48_RS19620	0.30	+1.1
4,379,969	+		HGI48_RS19620	0.30	-0.7
4,379,970	-		HGI48_RS19620	0.31	-1.7
4,379,970	-		HGI48_RS19620	0.31	-0.7
4,379,970	-		HGI48_RS19620	0.31	-1.0
4,379,970	-		HGI48_RS19620	0.31	+0.0
4,380,019	+		HGI48_RS19620	0.34	-0.6
4,380,039	+		HGI48_RS19620	0.36	-1.1
4,380,039	+		HGI48_RS19620	0.36	+0.3
4,380,040	-		HGI48_RS19620	0.36	+0.8
4,380,040	-		HGI48_RS19620	0.36	-0.9
4,380,140	+				+0.3
4,380,140	+		HGI48_RS19620	0.43	-0.7
4,380,177	-		HGI48_RS19620	0.46	+0.2
4,380,217	+		HGI48_RS19620	0.49	-0.1
4,380,217	+		HGI48_RS19620	0.49	+0.1
4,380,217	+		HGI48_RS19620	0.49	-0.1
4,380,218	-		HGI48_RS19620	0.49	+0.7
4,380,218	-		HGI48_RS19620	0.49	-3.6
4,380,483	+		HGI48_RS19620	0.68	+0.2
4,380,483	+		HGI48_RS19620	0.68	+0.1
4,380,483	+		HGI48_RS19620	0.68	-1.0
4,380,484	-		HGI48_RS19620	0.68	-1.4
4,380,484	-				-0.1
4,380,494	+				+0.3
4,380,494	+		HGI48_RS19620	0.69	+2.1
4,380,494	+		HGI48_RS19620	0.69	-0.1
4,380,495	-		HGI48_RS19620	0.69	-0.7
4,380,663	-		HGI48_RS19620	0.81	-0.7
4,380,665	+		HGI48_RS19620	0.81	-0.4
4,380,665	+		HGI48_RS19620	0.81	-0.1
4,380,666	-		HGI48_RS19620	0.81	-0.5
4,380,666	-		HGI48_RS19620	0.81	+0.2
4,380,699	+		HGI48_RS19620	0.84	+0.3
4,380,700	-		HGI48_RS19620	0.84	-0.7
4,380,707	+		HGI48_RS19620	0.84	+0.5
4,381,045	+				-1.4
4,381,045	+				-0.4
4,381,046	-				+0.4
4,381,046	-				-0.5
4,381,053	+				+0.6
4,381,054	-				+0.5
4,381,122	+				-0.1
4,381,122	+				-0.1
4,381,273	+				-0.3
4,381,273	+				-0.2
4,381,273	+				+0.3
4,381,274	-				+1.5
4,381,274	-				-1.7
4,381,274	-				+0.5
4,381,274	-				+0.7
4,381,296	+				-2.1
4,381,296	+				+2.7
4,381,296	+				+0.1
4,381,296	+				-0.5
4,381,296	+				-0.5
4,381,296	+				-0.1
4,381,297	-				+1.3
4,381,297	-				+1.6
4,381,297	-				+0.5
4,381,297	-				-0.7
4,381,297	-				+0.3
4,381,297	-				+0.3
4,381,416	-				+0.5
4,381,416	-				-0.5
4,381,418	+				+0.6
4,381,418	+				-1.4
4,381,613	-		HGI48_RS19625	0.21	-0.1
4,381,613	-		HGI48_RS19625	0.21	-1.7
4,381,613	-		HGI48_RS19625	0.21	-1.3
4,381,613	-				-0.1
4,381,613	-		HGI48_RS19625	0.21	+0.1
4,381,614	+		HGI48_RS19625	0.21	-0.3
4,381,656	+		HGI48_RS19625	0.24	-1.7
4,381,657	-		HGI48_RS19625	0.24	-0.1
4,381,657	-		HGI48_RS19625	0.24	-0.0
4,381,692	-		HGI48_RS19625	0.28	+0.6
4,381,790	+		HGI48_RS19625	0.36	-0.1