Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS18510

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,153,252	+		HGI48_RS18500	0.20	-1.9
4,153,253	-		HGI48_RS18500	0.20	-1.7
4,153,402	+		HGI48_RS18500	0.46	+0.4
4,153,402	+		HGI48_RS18500	0.46	-1.6
4,153,402	+				+0.3
4,153,402	+		HGI48_RS18500	0.46	+0.2
4,153,510	+		HGI48_RS18500	0.65	-0.1
4,153,510	+		HGI48_RS18500	0.65	-0.9
4,154,145	+				-0.1
4,154,145	+				-0.4
4,154,146	-				+0.9
4,154,149	+				-0.2
4,154,150	-				+0.9
4,154,163	+				-0.1
4,154,163	+				+1.4
4,154,182	+				-0.9
4,154,183	-				+0.3
4,154,217	-				-0.9
4,154,257	+				-0.9
4,154,258	-				-0.5
4,154,258	-				-2.1
4,154,325	+		HGI48_RS18510	0.11	-1.4
4,154,393	+		HGI48_RS18510	0.18	-0.9
4,154,394	-		HGI48_RS18510	0.18	-1.5
4,154,444	+		HGI48_RS18510	0.23	-1.9
4,154,444	+		HGI48_RS18510	0.23	-1.1
4,154,444	+		HGI48_RS18510	0.23	+1.4
4,154,444	+		HGI48_RS18510	0.23	-2.7
4,154,445	-				+0.3
4,154,445	-		HGI48_RS18510	0.23	-1.7
4,154,510	+		HGI48_RS18510	0.29	-1.7
4,154,546	+		HGI48_RS18510	0.33	-1.5
4,154,547	-		HGI48_RS18510	0.33	-0.3
4,154,555	+		HGI48_RS18510	0.34	-1.5
4,154,555	+		HGI48_RS18510	0.34	+1.2
4,154,555	+		HGI48_RS18510	0.34	+0.9
4,154,556	-		HGI48_RS18510	0.34	-1.6
4,154,556	-		HGI48_RS18510	0.34	-2.4
4,154,556	-		HGI48_RS18510	0.34	-1.3
4,154,556	-		HGI48_RS18510	0.34	-0.7
4,154,580	+		HGI48_RS18510	0.36	-0.1
4,154,580	+		HGI48_RS18510	0.36	+0.3
4,154,581	-		HGI48_RS18510	0.36	-0.5
4,154,585	+		HGI48_RS18510	0.37	-1.5
4,154,585	+		HGI48_RS18510	0.37	-0.7
4,154,585	+		HGI48_RS18510	0.37	-0.7
4,154,586	-		HGI48_RS18510	0.37	-2.5
4,154,586	-		HGI48_RS18510	0.37	-1.1
4,154,586	-		HGI48_RS18510	0.37	-3.5
4,154,586	-		HGI48_RS18510	0.37	-0.3
4,154,586	-		HGI48_RS18510	0.37	-0.6
4,154,586	-		HGI48_RS18510	0.37	-0.4
4,154,586	-		HGI48_RS18510	0.37	-1.3
4,154,606	+		HGI48_RS18510	0.39	-0.1
4,154,606	+		HGI48_RS18510	0.39	+0.3
4,154,607	-		HGI48_RS18510	0.39	-1.4
4,154,607	-		HGI48_RS18510	0.39	+0.2
4,154,607	-		HGI48_RS18510	0.39	-0.1
4,154,675	+		HGI48_RS18510	0.46	+0.6
4,154,675	+		HGI48_RS18510	0.46	+0.1
4,154,675	+		HGI48_RS18510	0.46	+0.5
4,154,676	-		HGI48_RS18510	0.46	-0.2
4,154,676	-		HGI48_RS18510	0.46	-0.7
4,154,676	-		HGI48_RS18510	0.46	+2.3
4,154,679	+				+0.3
4,154,679	+		HGI48_RS18510	0.46	-1.1
4,154,680	-		HGI48_RS18510	0.46	-0.4
4,154,680	-		HGI48_RS18510	0.46	+0.9
4,154,680	-		HGI48_RS18510	0.46	-1.3
4,154,680	-		HGI48_RS18510	0.46	-1.6
4,154,680	-		HGI48_RS18510	0.46	-0.8
4,154,708	+		HGI48_RS18510	0.49	+0.4
4,154,708	+		HGI48_RS18510	0.49	-1.1
4,154,708	+				+1.4
4,154,708	+		HGI48_RS18510	0.49	-1.2
4,154,732	+		HGI48_RS18510	0.51	-2.6
4,154,732	+		HGI48_RS18510	0.51	-1.1
4,154,732	+		HGI48_RS18510	0.51	-0.5
4,154,732	+		HGI48_RS18510	0.51	-0.9
4,154,733	-		HGI48_RS18510	0.52	-0.9
4,154,734	+		HGI48_RS18510	0.52	-1.5
4,154,734	+		HGI48_RS18510	0.52	-1.3
4,154,734	+		HGI48_RS18510	0.52	-1.9
4,154,734	+		HGI48_RS18510	0.52	-0.7
4,154,734	+		HGI48_RS18510	0.52	+0.5
4,154,734	+		HGI48_RS18510	0.52	-1.7
4,154,734	+		HGI48_RS18510	0.52	-1.1
4,154,734	+		HGI48_RS18510	0.52	+0.1
4,154,734	+		HGI48_RS18510	0.52	-1.1
4,154,734	+		HGI48_RS18510	0.52	-0.9
4,154,735	-		HGI48_RS18510	0.52	+0.5
4,154,735	-		HGI48_RS18510	0.52	+0.1
4,154,735	-		HGI48_RS18510	0.52	+0.3
4,154,735	-		HGI48_RS18510	0.52	-0.4
4,154,735	-		HGI48_RS18510	0.52	-0.1
4,154,735	-		HGI48_RS18510	0.52	+0.6
4,154,735	-		HGI48_RS18510	0.52	-1.9
4,154,735	-		HGI48_RS18510	0.52	-1.9
4,154,735	-		HGI48_RS18510	0.52	-0.6
4,154,735	-		HGI48_RS18510	0.52	-0.4
4,154,735	-		HGI48_RS18510	0.52	-0.7
4,154,735	-		HGI48_RS18510	0.52	+0.3
4,154,735	-		HGI48_RS18510	0.52	-0.5
4,154,735	-		HGI48_RS18510	0.52	-2.3
4,154,736	-				+1.6
4,154,739	+		HGI48_RS18510	0.52	-2.3
4,154,739	+		HGI48_RS18510	0.52	+0.1
4,154,740	-		HGI48_RS18510	0.52	-1.1
4,154,740	-		HGI48_RS18510	0.52	-0.7
4,154,822	+		HGI48_RS18510	0.60	-1.1
4,154,827	-		HGI48_RS18510	0.61	-0.4
4,154,893	+		HGI48_RS18510	0.67	+0.9
4,154,900	+		HGI48_RS18510	0.68	-0.8
4,154,900	+		HGI48_RS18510	0.68	-1.9
4,154,900	+				-0.7
4,154,900	+		HGI48_RS18510	0.68	-1.3
4,154,901	-		HGI48_RS18510	0.68	-1.1
4,154,901	-		HGI48_RS18510	0.68	-0.7
4,154,901	-		HGI48_RS18510	0.68	-0.9
4,154,934	+		HGI48_RS18510	0.72	-1.1
4,154,934	+		HGI48_RS18510	0.72	-0.1
4,154,935	-		HGI48_RS18510	0.72	-1.5
4,154,935	-				-0.1
4,155,078	+		HGI48_RS18510	0.86	-1.5
4,155,198	+				-0.5
4,155,219	+				+0.3
4,155,219	+				+0.7
4,155,220	-				-0.4
4,155,220	-				+0.5
4,155,226	-				-0.1
4,155,290	+				+0.3
4,155,314	+				-0.7
4,155,330	+				-0.4
4,155,330	+				-0.1
4,155,330	+				-0.7
4,155,337	+				-0.3
4,155,337	+				+0.2
4,155,338	-				+1.3
4,155,349	+				-0.4
4,155,349	+				-0.5
4,155,374	+				-1.5
4,155,376	+				+0.2
4,155,376	+				+0.7
4,155,377	-				+1.7
4,155,377	-				-0.7
4,155,395	+				+0.3
4,155,395	+				-1.1
4,155,396	-				+0.6
4,155,402	-				+1.1
4,155,506	+				+0.6
4,155,644	+		HGI48_RS18515	0.18	-0.7
4,155,645	-		HGI48_RS18515	0.18	-0.6
4,155,651	+		HGI48_RS18515	0.19	-1.5
4,155,651	+		HGI48_RS18515	0.19	-2.5
4,155,651	+		HGI48_RS18515	0.19	-1.5
4,155,652	-		HGI48_RS18515	0.19	-0.7
4,155,652	-		HGI48_RS18515	0.19	-1.7
4,155,652	-		HGI48_RS18515	0.19	-1.1
4,155,652	-		HGI48_RS18515	0.19	-0.7
4,155,652	-		HGI48_RS18515	0.19	+0.1
4,155,652	-		HGI48_RS18515	0.19	-0.1
4,155,652	-		HGI48_RS18515	0.19	-1.9
4,155,653	+		HGI48_RS18515	0.19	-1.2
4,155,653	+		HGI48_RS18515	0.19	-1.6
4,155,653	+		HGI48_RS18515	0.19	-1.1
4,155,653	+		HGI48_RS18515	0.19	+0.4
4,155,653	+		HGI48_RS18515	0.19	+0.2
4,155,653	+		HGI48_RS18515	0.19	+0.2
4,155,653	+		HGI48_RS18515	0.19	+0.9
4,155,653	+		HGI48_RS18515	0.19	-2.8
4,155,653	+		HGI48_RS18515	0.19	+0.6
4,155,654	-		HGI48_RS18515	0.19	-1.1
4,155,654	-		HGI48_RS18515	0.19	-0.3
4,155,654	-		HGI48_RS18515	0.19	+1.1
4,155,654	-				+0.3
4,155,654	-		HGI48_RS18515	0.19	+0.1
4,155,654	-		HGI48_RS18515	0.19	-0.8
4,155,654	-		HGI48_RS18515	0.19	+0.7
4,155,654	-		HGI48_RS18515	0.19	-1.5
4,155,654	-		HGI48_RS18515	0.19	-0.1
4,155,873	+		HGI48_RS18515	0.35	-1.3
4,155,873	+		HGI48_RS18515	0.35	+1.1
4,155,873	+		HGI48_RS18515	0.35	-1.9
4,155,873	+		HGI48_RS18515	0.35	-1.5
4,155,874	-		HGI48_RS18515	0.35	+0.0
4,155,915	+				+1.3
4,155,932	-		HGI48_RS18515	0.39	-0.1
4,156,171	+		HGI48_RS18515	0.56	-2.7
4,156,172	-		HGI48_RS18515	0.57	+0.9
4,156,172	-		HGI48_RS18515	0.57	-1.9
4,156,173	+		HGI48_RS18515	0.57	-1.5
4,156,173	+				+0.9
4,156,173	+				+0.9
4,156,173	+		HGI48_RS18515	0.57	+0.7
4,156,174	-		HGI48_RS18515	0.57	-0.0
4,156,174	-		HGI48_RS18515	0.57	+0.4
4,156,174	-		HGI48_RS18515	0.57	+1.5
4,156,174	-		HGI48_RS18515	0.57	-1.1
4,156,174	-		HGI48_RS18515	0.57	-1.5
4,156,202	+		HGI48_RS18515	0.59	+1.1
4,156,202	+		HGI48_RS18515	0.59	-0.1
4,156,203	-				+0.9