Experiment: Norland
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HGI48_RS13155 and HGI48_RS13160 are separated by 7 nucleotides HGI48_RS13160 and HGI48_RS13165 overlap by 11 nucleotides
HGI48_RS13155: HGI48_RS13155 - DNA polymerase III subunit delta', at 2,881,721 to 2,882,731
_RS13155
HGI48_RS13160: HGI48_RS13160 - dTMP kinase, at 2,882,739 to 2,883,383
_RS13160
HGI48_RS13165: HGI48_RS13165 - endolytic transglycosylase MltG, at 2,883,373 to 2,884,404
_RS13165
Position (kb)
2882
2883
2884 Strain fitness (log2 ratio)
-2
-1
0
1 at 2883.588 kb on - strand, within HGI48_RS13165 at 2883.588 kb on - strand at 2883.592 kb on - strand, within HGI48_RS13165 at 2883.592 kb on - strand, within HGI48_RS13165 at 2883.592 kb on - strand, within HGI48_RS13165 at 2883.597 kb on - strand, within HGI48_RS13165 at 2883.642 kb on - strand, within HGI48_RS13165 at 2883.642 kb on - strand, within HGI48_RS13165 at 2883.642 kb on - strand, within HGI48_RS13165 at 2883.642 kb on - strand, within HGI48_RS13165 at 2883.642 kb on - strand, within HGI48_RS13165 at 2883.642 kb on - strand, within HGI48_RS13165 at 2883.642 kb on - strand, within HGI48_RS13165 at 2883.660 kb on - strand, within HGI48_RS13165 at 2883.660 kb on - strand, within HGI48_RS13165 at 2883.660 kb on - strand, within HGI48_RS13165 at 2883.912 kb on - strand, within HGI48_RS13165 at 2883.912 kb on - strand, within HGI48_RS13165 at 2883.912 kb on - strand, within HGI48_RS13165 at 2883.912 kb on - strand at 2883.916 kb on - strand, within HGI48_RS13165 at 2883.943 kb on - strand, within HGI48_RS13165 at 2883.991 kb on - strand at 2884.003 kb on - strand, within HGI48_RS13165 at 2884.003 kb on - strand, within HGI48_RS13165 at 2884.003 kb on - strand at 2884.014 kb on - strand, within HGI48_RS13165 at 2884.222 kb on - strand, within HGI48_RS13165 at 2884.288 kb on - strand, within HGI48_RS13165 at 2884.331 kb on - strand at 2884.331 kb on - strand at 2884.331 kb on - strand at 2884.375 kb on - strand at 2884.375 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Norland remove 2,883,588 - HGI48_RS13165 0.21 -0.3 2,883,588 - -1.2 2,883,592 - HGI48_RS13165 0.21 -0.1 2,883,592 - HGI48_RS13165 0.21 +1.3 2,883,592 - HGI48_RS13165 0.21 -0.6 2,883,597 - HGI48_RS13165 0.22 +0.3 2,883,642 - HGI48_RS13165 0.26 +0.5 2,883,642 - HGI48_RS13165 0.26 +0.7 2,883,642 - HGI48_RS13165 0.26 +0.9 2,883,642 - HGI48_RS13165 0.26 +0.8 2,883,642 - HGI48_RS13165 0.26 -0.6 2,883,642 - HGI48_RS13165 0.26 -0.4 2,883,642 - HGI48_RS13165 0.26 -0.4 2,883,660 - HGI48_RS13165 0.28 -0.8 2,883,660 - HGI48_RS13165 0.28 -0.2 2,883,660 - HGI48_RS13165 0.28 +0.7 2,883,912 - HGI48_RS13165 0.52 +0.4 2,883,912 - HGI48_RS13165 0.52 -0.2 2,883,912 - HGI48_RS13165 0.52 -1.9 2,883,912 - -0.2 2,883,916 - HGI48_RS13165 0.53 -1.4 2,883,943 - HGI48_RS13165 0.55 -1.6 2,883,991 - +1.1 2,884,003 - HGI48_RS13165 0.61 -1.8 2,884,003 - HGI48_RS13165 0.61 +0.8 2,884,003 - -1.2 2,884,014 - HGI48_RS13165 0.62 +0.2 2,884,222 - HGI48_RS13165 0.82 +1.0 2,884,288 - HGI48_RS13165 0.89 -2.2 2,884,331 - +0.1 2,884,331 - -0.1 2,884,331 - +0.6 2,884,375 - +0.8 2,884,375 - -0.3
Or see this region's nucleotide sequence