Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10900

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,363,228	-				-2.3
2,363,278	+				-0.0
2,363,278	+				+1.0
2,363,301	+				+0.1
2,363,306	-				+0.6
2,363,415	-				+1.7
2,363,435	-				-1.3
2,363,459	-				-0.3
2,363,469	-				+0.5
2,363,471	+				+0.7
2,363,471	+				+1.3
2,363,471	+				-0.7
2,363,472	-				-1.3
2,363,472	-				+1.3
2,363,504	-				-2.7
2,363,562	-				+0.9
2,363,584	+				+1.3
2,363,615	-		HGI48_RS10895	0.19	+0.3
2,363,615	-		HGI48_RS10895	0.19	+0.2
2,363,627	+		HGI48_RS10895	0.21	-0.3
2,363,627	+				+1.5
2,363,627	+		HGI48_RS10895	0.21	-0.7
2,363,630	-		HGI48_RS10895	0.21	+0.1
2,363,683	-		HGI48_RS10895	0.31	+0.3
2,363,683	-		HGI48_RS10895	0.31	+0.4
2,363,739	+		HGI48_RS10895	0.41	+0.6
2,363,740	-		HGI48_RS10895	0.42	+0.0
2,363,740	-		HGI48_RS10895	0.42	-1.6
2,363,792	+		HGI48_RS10895	0.51	-1.6
2,363,812	-		HGI48_RS10895	0.55	-1.0
2,363,812	-				-0.7
2,363,812	-		HGI48_RS10895	0.55	-0.5
2,363,989	-				+1.3
2,363,999	+		HGI48_RS10895	0.90	+0.8
2,364,000	-		HGI48_RS10895	0.90	-1.3
2,364,000	-		HGI48_RS10895	0.90	-0.3
2,364,016	+				+1.0
2,364,052	+				-1.7
2,364,052	+				-3.0
2,364,057	+				-1.7
2,364,108	+				-1.4
2,364,108	+				+0.7
2,364,115	-				-0.7
2,364,123	+				+0.7
2,364,146	+				-0.1
2,364,146	+				+0.7
2,364,147	-				+0.9
2,364,147	-				-0.0
2,364,147	-				+0.2
2,364,156	+				-1.1
2,364,156	+				-0.1
2,364,156	+				-0.7
2,364,216	+				-1.7
2,364,304	-		HGI48_RS10900	0.12	+0.1
2,364,312	+		HGI48_RS10900	0.13	-0.7
2,364,312	+		HGI48_RS10900	0.13	-1.0
2,364,313	-				-1.3
2,364,421	+		HGI48_RS10900	0.27	+0.3
2,364,422	-		HGI48_RS10900	0.27	-0.3
2,364,422	-		HGI48_RS10900	0.27	-1.0
2,364,451	+		HGI48_RS10900	0.31	-1.0
2,364,451	+		HGI48_RS10900	0.31	-1.1
2,364,451	+				+1.6
2,364,452	-		HGI48_RS10900	0.31	-2.0
2,364,483	-		HGI48_RS10900	0.35	-3.2
2,364,573	+		HGI48_RS10900	0.47	-1.1
2,364,573	+		HGI48_RS10900	0.47	-2.7
2,364,573	+				+1.3
2,364,574	-				+0.3
2,364,739	+		HGI48_RS10900	0.69	-0.2
2,364,740	-		HGI48_RS10900	0.69	-1.0
2,364,740	-		HGI48_RS10900	0.69	-1.1
2,364,823	+		HGI48_RS10900	0.80	-0.7
2,364,823	+		HGI48_RS10900	0.80	-1.1
2,364,824	-		HGI48_RS10900	0.81	-1.1
2,364,883	-		HGI48_RS10900	0.88	-1.7
2,364,905	-				-1.0
2,364,905	-				-0.7
2,364,905	-				-2.0
2,364,905	-				-0.3
2,364,905	-				-0.3
2,364,961	-				-0.7
2,364,961	-				+0.7
2,364,967	+				-1.3
2,364,967	+				+1.1
2,364,968	-				+0.4
2,364,968	-				-1.0
2,365,009	+				+0.6
2,365,010	-				+0.3
2,365,058	-				+0.5
2,365,058	-				+0.6
2,365,102	+				+0.6
2,365,102	+				-0.9
2,365,103	-				-0.4
2,365,103	-				-0.5
2,365,103	-				+0.2
2,365,103	-				-0.4
2,365,112	+				-1.1
2,365,113	-				-0.1
2,365,113	-				+1.8
2,365,122	+				-0.3
2,365,123	-				-1.7
2,365,123	-				-0.9
2,365,128	+				+0.9
2,365,128	+				+0.2
2,365,128	+				-0.6
2,365,128	+				-0.7
2,365,128	+				-0.3
2,365,128	+				+0.1
2,365,128	+				+0.7
2,365,129	-				+0.0
2,365,129	-				-0.0
2,365,129	-				+1.3
2,365,129	-				-0.1
2,365,129	-				-0.2
2,365,129	-				-0.3
2,365,129	-				-0.5
2,365,133	-				+0.8
2,365,222	+		HGI48_RS10905	0.12	-0.0
2,365,222	+		HGI48_RS10905	0.12	-2.0
2,365,226	+		HGI48_RS10905	0.13	-0.0
2,365,227	-		HGI48_RS10905	0.13	+0.2
2,365,227	-		HGI48_RS10905	0.13	+0.6
2,365,227	-		HGI48_RS10905	0.13	+1.0
2,365,238	+		HGI48_RS10905	0.14	+0.8
2,365,275	+		HGI48_RS10905	0.18	+0.2
2,365,276	-		HGI48_RS10905	0.18	-0.7
2,365,276	-		HGI48_RS10905	0.18	-1.3
2,365,276	-		HGI48_RS10905	0.18	-1.3
2,365,330	+		HGI48_RS10905	0.23	-1.0
2,365,330	+		HGI48_RS10905	0.23	-0.3
2,365,330	+		HGI48_RS10905	0.23	+0.4
2,365,330	+		HGI48_RS10905	0.23	+0.0
2,365,330	+		HGI48_RS10905	0.23	-0.1
2,365,330	+		HGI48_RS10905	0.23	-0.5
2,365,331	-		HGI48_RS10905	0.24	-0.5
2,365,331	-		HGI48_RS10905	0.24	+0.1
2,365,331	-		HGI48_RS10905	0.24	+0.3
2,365,331	-		HGI48_RS10905	0.24	-0.9
2,365,331	-		HGI48_RS10905	0.24	-0.8
2,365,331	-				+2.3
2,365,331	-		HGI48_RS10905	0.24	-0.0
2,365,331	-		HGI48_RS10905	0.24	+1.1
2,365,334	+		HGI48_RS10905	0.24	+0.4
2,365,334	+		HGI48_RS10905	0.24	-1.2
2,365,334	+		HGI48_RS10905	0.24	+0.0
2,365,334	+		HGI48_RS10905	0.24	+0.8
2,365,334	+		HGI48_RS10905	0.24	-0.4
2,365,334	+		HGI48_RS10905	0.24	-2.0
2,365,334	+		HGI48_RS10905	0.24	-0.1
2,365,335	-		HGI48_RS10905	0.24	-1.1
2,365,335	-		HGI48_RS10905	0.24	-3.0
2,365,335	-		HGI48_RS10905	0.24	-0.0
2,365,335	-		HGI48_RS10905	0.24	+0.1
2,365,335	-		HGI48_RS10905	0.24	-0.3
2,365,337	+		HGI48_RS10905	0.24	-2.3
2,365,337	+		HGI48_RS10905	0.24	-0.6
2,365,337	+		HGI48_RS10905	0.24	+1.0
2,365,337	+		HGI48_RS10905	0.24	+0.0
2,365,338	-		HGI48_RS10905	0.24	-0.3
2,365,338	-		HGI48_RS10905	0.24	+0.1
2,365,338	-		HGI48_RS10905	0.24	+0.3
2,365,381	+		HGI48_RS10905	0.29	+0.5
2,365,381	+		HGI48_RS10905	0.29	+0.3
2,365,382	-		HGI48_RS10905	0.29	-1.3
2,365,382	-		HGI48_RS10905	0.29	-1.6
2,365,392	-		HGI48_RS10905	0.30	+1.1
2,365,392	-		HGI48_RS10905	0.30	-0.3
2,365,392	-		HGI48_RS10905	0.30	+0.4
2,365,434	+		HGI48_RS10905	0.34	-0.5
2,365,434	+		HGI48_RS10905	0.34	-0.1
2,365,434	+		HGI48_RS10905	0.34	+0.2
2,365,434	+		HGI48_RS10905	0.34	+0.1
2,365,434	+				+0.3
2,365,434	+		HGI48_RS10905	0.34	-1.1
2,365,434	+		HGI48_RS10905	0.34	+0.7
2,365,434	+		HGI48_RS10905	0.34	-0.1
2,365,435	-		HGI48_RS10905	0.34	-3.0
2,365,435	-		HGI48_RS10905	0.34	-0.3
2,365,435	-		HGI48_RS10905	0.34	+0.0
2,365,435	-		HGI48_RS10905	0.34	+0.0
2,365,506	+		HGI48_RS10905	0.42	-1.0
2,365,506	+		HGI48_RS10905	0.42	-0.2
2,365,507	-		HGI48_RS10905	0.42	-0.4
2,365,507	-		HGI48_RS10905	0.42	-1.0
2,365,510	+		HGI48_RS10905	0.42	+0.0
2,365,510	+		HGI48_RS10905	0.42	+0.3
2,365,510	+		HGI48_RS10905	0.42	+0.6
2,365,510	+		HGI48_RS10905	0.42	-0.0
2,365,510	+		HGI48_RS10905	0.42	-0.6
2,365,510	+		HGI48_RS10905	0.42	+0.1
2,365,510	+		HGI48_RS10905	0.42	+0.2
2,365,510	+		HGI48_RS10905	0.42	-0.5
2,365,510	+		HGI48_RS10905	0.42	+0.0
2,365,510	+		HGI48_RS10905	0.42	-1.6
2,365,510	+		HGI48_RS10905	0.42	+0.5
2,365,510	+		HGI48_RS10905	0.42	+0.5
2,365,511	-		HGI48_RS10905	0.42	-2.3
2,365,511	-		HGI48_RS10905	0.42	-0.6
2,365,511	-		HGI48_RS10905	0.42	+0.1
2,365,511	-		HGI48_RS10905	0.42	-1.3
2,365,511	-		HGI48_RS10905	0.42	-0.6
2,365,511	-		HGI48_RS10905	0.42	-0.1
2,365,511	-		HGI48_RS10905	0.42	+1.2
2,365,511	-		HGI48_RS10905	0.42	-1.4
2,365,511	-		HGI48_RS10905	0.42	+0.0
2,365,511	-		HGI48_RS10905	0.42	-0.1
2,365,511	-		HGI48_RS10905	0.42	+0.1
2,365,511	-		HGI48_RS10905	0.42	+0.0
2,365,511	-		HGI48_RS10905	0.42	+0.3
2,365,511	-		HGI48_RS10905	0.42	-0.4
2,365,511	-		HGI48_RS10905	0.42	+0.5
2,365,511	-		HGI48_RS10905	0.42	-0.9
2,365,511	-		HGI48_RS10905	0.42	+0.1
2,365,511	-		HGI48_RS10905	0.42	-0.5
2,365,511	-		HGI48_RS10905	0.42	+0.2
2,365,511	-		HGI48_RS10905	0.42	-0.2
2,365,536	+		HGI48_RS10905	0.45	-0.3
2,365,536	+				+1.3
2,365,536	+		HGI48_RS10905	0.45	-0.2
2,365,536	+		HGI48_RS10905	0.45	+0.3
2,365,536	+		HGI48_RS10905	0.45	-0.6
2,365,536	+		HGI48_RS10905	0.45	+1.8
2,365,536	+		HGI48_RS10905	0.45	+1.0
2,365,536	+		HGI48_RS10905	0.45	-2.7
2,365,537	-		HGI48_RS10905	0.45	-0.5
2,365,573	-		HGI48_RS10905	0.49	+0.4
2,365,573	-		HGI48_RS10905	0.49	+0.7
2,365,604	+		HGI48_RS10905	0.52	-0.6
2,365,751	+		HGI48_RS10905	0.67	+0.4
2,365,751	+		HGI48_RS10905	0.67	-0.4
2,365,751	+		HGI48_RS10905	0.67	-0.3
2,365,752	-		HGI48_RS10905	0.67	+0.2
2,365,752	-		HGI48_RS10905	0.67	-0.1
2,365,752	-		HGI48_RS10905	0.67	-0.7
2,365,752	-		HGI48_RS10905	0.67	+0.3
2,365,752	-		HGI48_RS10905	0.67	-0.4
2,365,829	-		HGI48_RS10905	0.75	+0.3
2,365,861	+		HGI48_RS10905	0.78	-1.3
2,365,861	+		HGI48_RS10905	0.78	+0.3
2,365,861	+		HGI48_RS10905	0.78	-0.0
2,365,861	+		HGI48_RS10905	0.78	-1.3
2,365,861	+		HGI48_RS10905	0.78	-0.6
2,365,861	+		HGI48_RS10905	0.78	-0.3
2,365,861	+		HGI48_RS10905	0.78	+0.1
2,365,862	-		HGI48_RS10905	0.79	-0.9
2,365,862	-		HGI48_RS10905	0.79	-0.6
2,365,862	-				-1.3
2,365,862	-		HGI48_RS10905	0.79	-0.3
2,365,966	+		HGI48_RS10905	0.89	+0.1
2,365,966	+		HGI48_RS10905	0.89	+0.1
2,365,967	-		HGI48_RS10905	0.89	+0.9
2,365,967	-		HGI48_RS10905	0.89	+0.7
2,365,967	-		HGI48_RS10905	0.89	-2.3