Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS08380

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,800,513	-		HGI48_RS08375	0.39	-0.6
1,800,513	-		HGI48_RS08375	0.39	-2.2
1,800,535	-		HGI48_RS08375	0.40	-1.9
1,800,535	-		HGI48_RS08375	0.40	+0.1
1,800,535	-		HGI48_RS08375	0.40	-0.0
1,800,629	-				+1.0
1,800,629	-		HGI48_RS08375	0.46	-1.6
1,800,656	-		HGI48_RS08375	0.47	+0.1
1,800,667	+		HGI48_RS08375	0.48	+0.9
1,800,668	-		HGI48_RS08375	0.48	-2.2
1,800,668	-		HGI48_RS08375	0.48	-0.4
1,800,668	-		HGI48_RS08375	0.48	-0.2
1,800,709	+		HGI48_RS08375	0.51	-1.2
1,800,758	-		HGI48_RS08375	0.54	-0.7
1,800,759	+		HGI48_RS08375	0.54	-0.2
1,800,759	+		HGI48_RS08375	0.54	-0.8
1,800,759	+		HGI48_RS08375	0.54	+0.7
1,800,759	+		HGI48_RS08375	0.54	-1.2
1,800,760	-		HGI48_RS08375	0.54	-0.2
1,800,760	-		HGI48_RS08375	0.54	-0.0
1,800,760	-		HGI48_RS08375	0.54	-0.6
1,800,760	-		HGI48_RS08375	0.54	-0.3
1,800,760	-		HGI48_RS08375	0.54	-0.6
1,800,812	+		HGI48_RS08375	0.57	-0.3
1,800,812	+		HGI48_RS08375	0.57	-0.0
1,800,812	+		HGI48_RS08375	0.57	-1.3
1,800,812	+		HGI48_RS08375	0.57	-1.9
1,800,812	+		HGI48_RS08375	0.57	-1.3
1,800,812	+		HGI48_RS08375	0.57	+1.9
1,800,812	+		HGI48_RS08375	0.57	-1.0
1,800,812	+		HGI48_RS08375	0.57	-2.6
1,800,812	+		HGI48_RS08375	0.57	-2.2
1,800,813	-		HGI48_RS08375	0.57	-0.6
1,800,814	+		HGI48_RS08375	0.57	+1.0
1,800,814	+		HGI48_RS08375	0.57	-0.6
1,800,815	-		HGI48_RS08375	0.57	-1.2
1,800,857	+		HGI48_RS08375	0.60	-2.0
1,800,857	+		HGI48_RS08375	0.60	-0.6
1,800,857	+		HGI48_RS08375	0.60	-1.1
1,800,857	+		HGI48_RS08375	0.60	-0.8
1,800,858	-		HGI48_RS08375	0.60	+0.1
1,800,858	-		HGI48_RS08375	0.60	-1.1
1,800,858	-		HGI48_RS08375	0.60	+0.0
1,800,858	-		HGI48_RS08375	0.60	-0.1
1,800,858	-		HGI48_RS08375	0.60	-1.3
1,800,866	+		HGI48_RS08375	0.60	-0.9
1,800,866	+		HGI48_RS08375	0.60	-0.6
1,800,867	-		HGI48_RS08375	0.60	-0.3
1,800,877	+		HGI48_RS08375	0.61	-0.2
1,800,877	+		HGI48_RS08375	0.61	-1.3
1,800,878	-		HGI48_RS08375	0.61	-2.6
1,800,891	+		HGI48_RS08375	0.62	-0.2
1,800,891	+		HGI48_RS08375	0.62	-1.6
1,800,892	-		HGI48_RS08375	0.62	-1.0
1,800,892	-				+0.4
1,800,892	-		HGI48_RS08375	0.62	-1.9
1,800,892	-		HGI48_RS08375	0.62	-0.8
1,800,892	-		HGI48_RS08375	0.62	+0.1
1,800,895	+		HGI48_RS08375	0.62	+0.7
1,800,896	-		HGI48_RS08375	0.62	-1.8
1,800,917	-				+0.4
1,800,988	+		HGI48_RS08375	0.68	+0.4
1,801,034	-		HGI48_RS08375	0.70	-0.6
1,801,034	-		HGI48_RS08375	0.70	+0.4
1,801,042	+		HGI48_RS08375	0.71	+0.7
1,801,042	+		HGI48_RS08375	0.71	-0.6
1,801,042	+		HGI48_RS08375	0.71	-0.1
1,801,043	-		HGI48_RS08375	0.71	-0.8
1,801,079	-		HGI48_RS08375	0.73	-1.5
1,801,079	-		HGI48_RS08375	0.73	-0.6
1,801,079	-		HGI48_RS08375	0.73	-1.6
1,801,153	+		HGI48_RS08375	0.78	+0.1
1,801,154	-		HGI48_RS08375	0.78	-2.6
1,801,160	+		HGI48_RS08375	0.78	-0.3
1,801,160	+		HGI48_RS08375	0.78	-0.6
1,801,161	-		HGI48_RS08375	0.78	-0.6
1,801,161	-		HGI48_RS08375	0.78	+0.8
1,801,165	+		HGI48_RS08375	0.78	+0.8
1,801,165	+		HGI48_RS08375	0.78	-0.9
1,801,165	+		HGI48_RS08375	0.78	-1.6
1,801,165	+		HGI48_RS08375	0.78	+0.2
1,801,166	-		HGI48_RS08375	0.79	-1.9
1,801,166	-		HGI48_RS08375	0.79	-0.4
1,801,166	-		HGI48_RS08375	0.79	-1.0
1,801,166	-		HGI48_RS08375	0.79	-0.6
1,801,166	-		HGI48_RS08375	0.79	-2.4
1,801,166	-		HGI48_RS08375	0.79	+1.0
1,801,172	-		HGI48_RS08375	0.79	-1.6
1,801,172	-		HGI48_RS08375	0.79	+0.4
1,801,172	-		HGI48_RS08375	0.79	-0.3
1,801,172	-		HGI48_RS08375	0.79	-0.3
1,801,238	+				-0.2
1,801,238	+		HGI48_RS08375	0.83	-1.6
1,801,238	+		HGI48_RS08375	0.83	+0.2
1,801,238	+		HGI48_RS08375	0.83	-1.6
1,801,238	+		HGI48_RS08375	0.83	-0.4
1,801,239	-		HGI48_RS08375	0.83	+0.9
1,801,242	-		HGI48_RS08375	0.83	-1.3
1,801,292	-		HGI48_RS08375	0.86	-0.6
1,801,294	+		HGI48_RS08375	0.86	-0.6
1,801,294	+		HGI48_RS08375	0.86	+1.0
1,801,294	+		HGI48_RS08375	0.86	+0.9
1,801,316	+		HGI48_RS08375	0.88	-1.9
1,801,316	+		HGI48_RS08375	0.88	-1.2
1,801,316	+		HGI48_RS08375	0.88	-0.6
1,801,317	-		HGI48_RS08375	0.88	-0.7
1,801,320	-		HGI48_RS08375	0.88	-0.9
1,801,330	-				-0.2
1,801,371	+				-1.4
1,801,429	-				+0.4
1,801,466	-				+0.7
1,801,510	+				+0.8
1,801,510	+				-0.3
1,801,582	+				+0.1
1,801,590	+				+0.4
1,801,598	-				-1.6
1,801,630	-		HGI48_RS08380	0.11	-1.1
1,801,680	+		HGI48_RS08380	0.15	-0.9
1,801,724	+		HGI48_RS08380	0.19	-0.6
1,801,735	+		HGI48_RS08380	0.20	-1.6
1,801,736	-				-1.2
1,801,774	-				+0.4
1,801,790	+				-0.2
1,801,790	+		HGI48_RS08380	0.26	-0.9
1,801,790	+		HGI48_RS08380	0.26	-0.8
1,801,790	+		HGI48_RS08380	0.26	-0.1
1,801,790	+		HGI48_RS08380	0.26	-1.6
1,801,790	+		HGI48_RS08380	0.26	-0.7
1,801,791	-				-0.6
1,801,791	-				+1.4
1,801,791	-		HGI48_RS08380	0.26	-0.4
1,801,791	-				+1.7
1,801,802	-		HGI48_RS08380	0.27	+0.1
1,801,963	+		HGI48_RS08380	0.41	-0.2
1,801,968	+		HGI48_RS08380	0.42	-1.9
1,802,038	-		HGI48_RS08380	0.48	+0.5
1,802,087	+				-0.6
1,802,087	+		HGI48_RS08380	0.53	-1.0
1,802,087	+		HGI48_RS08380	0.53	-2.9
1,802,124	-		HGI48_RS08380	0.56	-1.0
1,802,193	+		HGI48_RS08380	0.63	-0.7
1,802,193	+		HGI48_RS08380	0.63	-0.5
1,802,194	-		HGI48_RS08380	0.63	-0.1
1,802,196	+		HGI48_RS08380	0.63	-1.0
1,802,245	-		HGI48_RS08380	0.67	-1.0
1,802,269	+		HGI48_RS08380	0.70	-0.5
1,802,269	+		HGI48_RS08380	0.70	-1.0
1,802,269	+		HGI48_RS08380	0.70	-0.3
1,802,296	+		HGI48_RS08380	0.72	-0.9
1,802,378	+		HGI48_RS08380	0.80	-1.1
1,802,379	-		HGI48_RS08380	0.80	-1.4
1,802,402	+		HGI48_RS08380	0.82	+0.4
1,802,430	+		HGI48_RS08380	0.84	-0.3
1,802,430	+		HGI48_RS08380	0.84	-1.6
1,802,452	+		HGI48_RS08380	0.86	-0.3
1,802,525	+				-1.2
1,802,525	+				-1.2
1,802,525	+				-1.6
1,802,525	+				-0.6
1,802,525	+				-1.9
1,802,525	+				+1.1
1,802,526	-				-1.7
1,802,526	-				-1.2
1,802,526	-				+0.9
1,802,526	-				+1.0
1,802,526	-				+0.2
1,802,526	-				-0.4
1,802,592	+				-0.1
1,802,598	+				-0.6
1,802,598	+				-0.8
1,802,603	+				-0.4
1,802,610	+				-1.9
1,802,619	+				-1.1
1,802,619	+				-0.3
1,802,625	-				+1.0
1,802,627	-				-0.9
1,802,642	+				-1.9
1,802,649	+				-1.6
1,802,653	+				-0.5
1,802,714	+				-0.3
1,802,714	+				-1.9
1,802,715	-				-0.6
1,802,734	+				+1.9
1,802,792	+				-1.2
1,802,793	-				-0.9
1,802,793	-				-0.2
1,802,793	-				-1.3
1,802,860	+				-0.6
1,802,861	-				-0.4
1,802,866	+				-1.6
1,802,866	+				+1.2
1,802,866	+				-0.8
1,802,866	+				-1.6
1,802,866	+				-2.2
1,802,867	-				+0.6
1,802,867	-				+0.4
1,802,867	-				-1.6
1,802,867	-				+0.9
1,802,870	+				-1.2
1,802,870	+				+0.6
1,802,870	+				-0.0
1,802,870	+				+1.4
1,802,870	+				-0.9
1,802,870	+				-1.4
1,802,870	+				-0.9
1,802,870	+				-1.4
1,802,870	+				-0.2
1,802,870	+				-0.6
1,802,871	-				-0.6
1,802,871	-				+0.3
1,802,871	-				-0.6
1,802,871	-				+0.8
1,802,871	-				-0.6
1,802,871	-				+0.3
1,802,871	-				-0.7
1,802,871	-				+0.8
1,802,871	-				+0.4
1,802,871	-				-0.3
1,802,872	+				+1.1
1,802,872	+				+0.2
1,802,873	-				-1.2
1,802,873	-				+1.1
1,802,873	-				+0.4
1,802,889	+				+0.2
1,802,901	+				-1.8
1,802,901	+				-1.6
1,802,902	-				-1.4
1,802,902	-				-1.6
1,802,905	+				+0.1
1,802,972	+				+0.3
1,802,972	+				-2.2
1,802,973	-				-0.0
1,802,973	-				-1.6
1,803,004	+				+0.0
1,803,004	+				-1.0
1,803,004	+				-1.9
1,803,005	-				-2.3
1,803,005	-				-2.2
1,803,005	-				+0.4
1,803,006	+				-0.6
1,803,062	+				-0.3
1,803,111	+		HGI48_RS08385	0.25	-0.8
1,803,111	+		HGI48_RS08385	0.25	-0.4
1,803,111	+		HGI48_RS08385	0.25	-0.4
1,803,112	-		HGI48_RS08385	0.26	-0.6
1,803,144	+		HGI48_RS08385	0.39	-1.6
1,803,249	+		HGI48_RS08385	0.81	+0.4
1,803,250	-		HGI48_RS08385	0.81	+0.4
1,803,284	-				+0.8
1,803,327	+				-0.3
1,803,328	-				+0.4
1,803,536	+		HGI48_RS08390	0.60	-0.9
1,803,536	+		HGI48_RS08390	0.60	-0.2
1,803,591	-		HGI48_RS08390	0.82	+0.7