Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS07710

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,647,863	-				-0.0
1,647,884	+				-0.1
1,647,884	+				-1.1
1,647,884	+				+1.5
1,647,884	+				-1.3
1,647,884	+				-1.1
1,648,041	-				+0.1
1,648,103	+				-0.3
1,648,104	-				+0.5
1,648,104	-				+0.2
1,648,104	-				+1.9
1,648,105	+				-2.0
1,648,105	+				+0.5
1,648,105	+				-0.3
1,648,105	+				+0.0
1,648,105	+				-0.9
1,648,105	+				-0.5
1,648,105	+				+1.7
1,648,106	-				-0.7
1,648,106	-				-1.9
1,648,106	-				-0.3
1,648,106	-				+0.8
1,648,106	-				-1.1
1,648,106	-				+1.5
1,648,108	+				+0.5
1,648,109	-				-1.0
1,648,109	-				-1.1
1,648,109	-				-2.1
1,648,109	-				+0.7
1,648,109	-				-1.3
1,648,109	-				-0.8
1,648,109	-				+2.5
1,648,109	-				-0.6
1,648,325	-		HGI48_RS07705	0.34	-0.0
1,648,340	-		HGI48_RS07705	0.36	-0.1
1,648,340	-		HGI48_RS07705	0.36	-0.4
1,648,343	+				+0.5
1,648,343	+				+0.5
1,648,344	-		HGI48_RS07705	0.37	+0.6
1,648,344	-		HGI48_RS07705	0.37	-0.6
1,648,344	-		HGI48_RS07705	0.37	+0.1
1,648,344	-		HGI48_RS07705	0.37	-0.5
1,648,344	-		HGI48_RS07705	0.37	-0.2
1,648,356	-				+0.9
1,648,408	+		HGI48_RS07705	0.46	+1.2
1,648,408	+		HGI48_RS07705	0.46	-0.8
1,648,408	+		HGI48_RS07705	0.46	+0.7
1,648,408	+		HGI48_RS07705	0.46	+0.2
1,648,409	-		HGI48_RS07705	0.46	-0.9
1,648,478	+		HGI48_RS07705	0.56	-0.9
1,648,479	-		HGI48_RS07705	0.56	-0.7
1,648,496	+		HGI48_RS07705	0.58	-2.7
1,648,496	+		HGI48_RS07705	0.58	+0.5
1,648,497	-		HGI48_RS07705	0.59	-0.1
1,648,497	-		HGI48_RS07705	0.59	+0.1
1,648,497	-		HGI48_RS07705	0.59	+0.7
1,648,497	-				+0.5
1,648,497	-		HGI48_RS07705	0.59	-2.3
1,648,499	+		HGI48_RS07705	0.59	-0.5
1,648,499	+		HGI48_RS07705	0.59	-0.5
1,648,500	-		HGI48_RS07705	0.59	-1.9
1,648,500	-		HGI48_RS07705	0.59	+1.0
1,648,548	-		HGI48_RS07705	0.66	-0.9
1,648,682	+		HGI48_RS07705	0.85	-1.3
1,648,683	-		HGI48_RS07705	0.85	-0.1
1,648,683	-		HGI48_RS07705	0.85	-1.9
1,648,683	-		HGI48_RS07705	0.85	-0.8
1,648,683	-		HGI48_RS07705	0.85	-0.5
1,648,697	+		HGI48_RS07705	0.87	-0.0
1,648,721	+				+1.1
1,648,784	+				-2.7
1,648,903	+		HGI48_RS07710	0.14	-0.3
1,648,904	-		HGI48_RS07710	0.14	-1.5
1,649,148	+				+2.8
1,649,148	+		HGI48_RS07710	0.40	-0.5
1,649,148	+		HGI48_RS07710	0.40	-0.5
1,649,149	-		HGI48_RS07710	0.40	-2.2
1,649,149	-		HGI48_RS07710	0.40	-3.0
1,649,149	-		HGI48_RS07710	0.40	+0.3
1,649,243	-		HGI48_RS07710	0.50	-1.1
1,649,655	-				+0.5
1,649,670	+				+1.0
1,649,670	+				+1.5
1,649,670	+				-0.6
1,649,671	-				-0.3
1,649,681	+				-0.3
1,649,691	+				+0.1
1,649,691	+				-0.5
1,649,692	-				-0.4
1,649,692	-				+1.6
1,649,706	+				-0.1
1,649,706	+				+0.5
1,649,707	-				-1.5
1,649,707	-				-0.9
1,649,707	-				-0.1
1,649,707	-				-0.1
1,649,789	-				-0.7
1,649,795	+				-1.5
1,649,796	-				+0.7
1,649,806	+				+0.8
1,649,806	+				+1.5
1,649,819	+				-0.5
1,649,819	+				+0.5
1,649,819	+				+0.8
1,649,819	+				-0.8
1,649,819	+				+0.1
1,649,819	+				-0.5
1,649,819	+				+0.1
1,649,819	+				-1.1
1,649,819	+				+0.9
1,649,819	+				-0.6
1,649,819	+				+0.1
1,649,819	+				+1.9
1,649,819	+				+0.7
1,649,820	-				+0.0
1,649,820	-				-0.3
1,649,820	-				-0.9
1,649,820	-				-0.8
1,649,820	-				-0.6
1,649,820	-				-0.1
1,649,820	-				-0.1
1,649,821	+				+0.6
1,649,821	+				-2.1
1,649,821	+				+0.0
1,649,821	+				-1.1
1,649,821	+				-1.9
1,649,821	+				-1.2
1,649,821	+				-1.5
1,649,821	+				-0.4
1,649,821	+				+0.8
1,649,821	+				-0.3
1,649,821	+				+1.3
1,649,821	+				+2.0
1,649,821	+				-0.9
1,649,821	+				-0.6
1,649,821	+				+0.1
1,649,822	-				+0.8
1,649,822	-				-2.4
1,649,822	-				-0.4
1,649,822	-				+0.4
1,649,822	-				-0.5
1,649,822	-				-0.8
1,649,822	-				+0.3
1,649,822	-				-0.5
1,649,822	-				-0.8
1,649,822	-				-1.9
1,649,822	-				+0.9
1,649,822	-				+1.3
1,649,822	-				-0.8
1,649,878	+				-1.1
1,649,879	-				-0.4
1,649,879	-				-0.3
1,649,884	+				-0.6
1,649,884	+				+0.3
1,649,885	-				-1.1
1,649,885	-				+0.8
1,649,885	-				+1.3
1,649,885	-				-0.4
1,650,002	+		HGI48_RS07715	0.16	+0.7
1,650,229	+		HGI48_RS07715	0.45	-1.1
1,650,269	+		HGI48_RS07715	0.50	+0.0
1,650,269	+		HGI48_RS07715	0.50	-2.5
1,650,269	+				+0.5
1,650,270	-		HGI48_RS07715	0.51	+0.5
1,650,270	-		HGI48_RS07715	0.51	-2.9
1,650,435	-		HGI48_RS07715	0.72	-0.3
1,650,435	-		HGI48_RS07715	0.72	-0.1
1,650,495	-		HGI48_RS07715	0.80	-1.5
1,650,514	+				+2.3
1,650,514	+		HGI48_RS07715	0.82	+1.6
1,650,514	+		HGI48_RS07715	0.82	-0.8
1,650,514	+		HGI48_RS07715	0.82	-1.1
1,650,514	+		HGI48_RS07715	0.82	+0.1
1,650,514	+		HGI48_RS07715	0.82	-1.5
1,650,514	+		HGI48_RS07715	0.82	-0.1
1,650,514	+		HGI48_RS07715	0.82	+0.0
1,650,514	+		HGI48_RS07715	0.82	+0.5
1,650,514	+		HGI48_RS07715	0.82	-1.8
1,650,514	+		HGI48_RS07715	0.82	-2.1
1,650,515	-				+1.5
1,650,515	-		HGI48_RS07715	0.82	+0.6
1,650,515	-		HGI48_RS07715	0.82	+0.3
1,650,515	-		HGI48_RS07715	0.82	+0.5
1,650,515	-		HGI48_RS07715	0.82	+0.3
1,650,515	-		HGI48_RS07715	0.82	-0.3
1,650,515	-		HGI48_RS07715	0.82	+0.3
1,650,515	-		HGI48_RS07715	0.82	+0.5
1,650,517	+		HGI48_RS07715	0.82	+0.2
1,650,517	+		HGI48_RS07715	0.82	-1.9
1,650,544	+		HGI48_RS07715	0.86	-1.9
1,650,544	+		HGI48_RS07715	0.86	-1.4
1,650,544	+		HGI48_RS07715	0.86	-0.2
1,650,544	+		HGI48_RS07715	0.86	-1.5
1,650,544	+		HGI48_RS07715	0.86	-0.9
1,650,544	+		HGI48_RS07715	0.86	-1.6
1,650,545	-		HGI48_RS07715	0.86	-0.7
1,650,545	-		HGI48_RS07715	0.86	+0.8
1,650,545	-				-0.1
1,650,545	-		HGI48_RS07715	0.86	-1.3
1,650,545	-		HGI48_RS07715	0.86	-0.8
1,650,630	-				-0.5
1,650,653	+				-1.0
1,650,654	-				+1.3
1,650,654	-				+0.5
1,650,659	+				-1.1
1,650,660	-				-1.5