Experiment: Norland
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HGI48_RS00795 and HGI48_RS00800 are separated by 133 nucleotides HGI48_RS00800 and HGI48_RS00805 are separated by 398 nucleotides
HGI48_RS00795: HGI48_RS00795 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase, at 180,967 to 181,986
_RS00795
HGI48_RS00800: HGI48_RS00800 - serine O-acetyltransferase, at 182,120 to 182,941
_RS00800
HGI48_RS00805: HGI48_RS00805 - lipid IV(A) palmitoyltransferase PagP, at 183,340 to 183,942
_RS00805
Position (kb) 182
183 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 181.150 kb on - strand, within HGI48_RS00795 at 181.356 kb on + strand, within HGI48_RS00795 at 181.909 kb on + strand at 181.910 kb on - strand at 181.995 kb on + strand at 181.996 kb on - strand at 181.996 kb on - strand at 181.998 kb on + strand at 181.998 kb on + strand at 181.999 kb on - strand at 182.033 kb on + strand at 182.033 kb on + strand at 182.034 kb on - strand at 182.034 kb on - strand at 182.034 kb on - strand at 182.034 kb on - strand at 182.034 kb on - strand at 182.034 kb on - strand at 182.056 kb on + strand at 182.258 kb on + strand, within HGI48_RS00800 at 182.259 kb on - strand at 182.259 kb on - strand at 182.272 kb on + strand, within HGI48_RS00800 at 182.412 kb on - strand, within HGI48_RS00800 at 182.752 kb on + strand, within HGI48_RS00800 at 182.753 kb on - strand, within HGI48_RS00800 at 182.760 kb on + strand at 182.761 kb on - strand, within HGI48_RS00800 at 182.761 kb on - strand, within HGI48_RS00800 at 182.894 kb on + strand at 182.942 kb on + strand at 182.943 kb on - strand at 182.943 kb on - strand at 182.943 kb on - strand at 183.067 kb on - strand at 183.136 kb on + strand at 183.136 kb on + strand at 183.141 kb on + strand at 183.153 kb on - strand at 183.153 kb on - strand at 183.153 kb on - strand at 183.187 kb on - strand at 183.197 kb on + strand at 183.197 kb on + strand at 183.203 kb on + strand at 183.204 kb on - strand at 183.207 kb on + strand at 183.207 kb on + strand at 183.208 kb on - strand at 183.227 kb on + strand at 183.227 kb on + strand at 183.227 kb on + strand at 183.227 kb on + strand at 183.227 kb on + strand at 183.227 kb on + strand at 183.228 kb on - strand at 183.228 kb on - strand at 183.228 kb on - strand at 183.228 kb on - strand at 183.228 kb on - strand at 183.228 kb on - strand at 183.228 kb on - strand at 183.230 kb on - strand at 183.246 kb on + strand at 183.246 kb on + strand at 183.247 kb on - strand at 183.267 kb on - strand at 183.267 kb on - strand at 183.329 kb on + strand at 183.330 kb on - strand at 183.330 kb on - strand at 183.330 kb on - strand at 183.339 kb on + strand at 183.339 kb on + strand at 183.340 kb on - strand at 183.347 kb on + strand at 183.347 kb on + strand at 183.348 kb on - strand at 183.348 kb on - strand at 183.392 kb on + strand at 183.393 kb on - strand at 183.396 kb on + strand at 183.405 kb on - strand, within HGI48_RS00805 at 183.429 kb on + strand, within HGI48_RS00805 at 183.532 kb on + strand, within HGI48_RS00805 at 183.532 kb on + strand, within HGI48_RS00805 at 183.532 kb on + strand, within HGI48_RS00805 at 183.532 kb on + strand, within HGI48_RS00805 at 183.532 kb on + strand, within HGI48_RS00805 at 183.532 kb on + strand, within HGI48_RS00805 at 183.532 kb on + strand, within HGI48_RS00805 at 183.532 kb on + strand, within HGI48_RS00805 at 183.532 kb on + strand, within HGI48_RS00805 at 183.532 kb on + strand, within HGI48_RS00805 at 183.533 kb on - strand, within HGI48_RS00805 at 183.533 kb on - strand at 183.533 kb on - strand, within HGI48_RS00805 at 183.533 kb on - strand, within HGI48_RS00805 at 183.533 kb on - strand, within HGI48_RS00805 at 183.533 kb on - strand, within HGI48_RS00805 at 183.533 kb on - strand at 183.556 kb on - strand, within HGI48_RS00805 at 183.568 kb on + strand, within HGI48_RS00805 at 183.569 kb on - strand, within HGI48_RS00805 at 183.569 kb on - strand, within HGI48_RS00805 at 183.619 kb on + strand, within HGI48_RS00805 at 183.664 kb on + strand, within HGI48_RS00805 at 183.664 kb on + strand at 183.664 kb on + strand, within HGI48_RS00805 at 183.705 kb on + strand, within HGI48_RS00805 at 183.706 kb on - strand at 183.721 kb on + strand at 183.811 kb on + strand, within HGI48_RS00805 at 183.811 kb on + strand, within HGI48_RS00805 at 183.811 kb on + strand, within HGI48_RS00805 at 183.812 kb on - strand, within HGI48_RS00805 at 183.853 kb on + strand, within HGI48_RS00805 at 183.853 kb on + strand, within HGI48_RS00805 at 183.880 kb on + strand, within HGI48_RS00805 at 183.880 kb on + strand, within HGI48_RS00805 at 183.880 kb on + strand, within HGI48_RS00805 at 183.880 kb on + strand, within HGI48_RS00805 at 183.881 kb on - strand, within HGI48_RS00805 at 183.881 kb on - strand, within HGI48_RS00805 at 183.881 kb on - strand, within HGI48_RS00805 at 183.895 kb on + strand at 183.895 kb on + strand at 183.895 kb on + strand at 183.895 kb on + strand at 183.895 kb on + strand at 183.895 kb on + strand at 183.895 kb on + strand at 183.895 kb on + strand at 183.895 kb on + strand at 183.895 kb on + strand at 183.895 kb on + strand at 183.896 kb on - strand at 183.896 kb on - strand at 183.896 kb on - strand at 183.896 kb on - strand at 183.896 kb on - strand at 183.896 kb on - strand at 183.896 kb on - strand at 183.897 kb on + strand at 183.898 kb on - strand at 183.898 kb on - strand at 183.900 kb on + strand at 183.901 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Norland remove 181,150 - HGI48_RS00795 0.18 -0.7 181,356 + HGI48_RS00795 0.38 -1.4 181,909 + -3.2 181,910 - +0.9 181,995 + +0.5 181,996 - -0.1 181,996 - -0.7 181,998 + -0.4 181,998 + -1.1 181,999 - -1.9 182,033 + -1.4 182,033 + -1.1 182,034 - -0.9 182,034 - +0.1 182,034 - -3.0 182,034 - +1.9 182,034 - +0.7 182,034 - +0.9 182,056 + -0.1 182,258 + HGI48_RS00800 0.17 -2.8 182,259 - +1.5 182,259 - -0.7 182,272 + HGI48_RS00800 0.18 -1.4 182,412 - HGI48_RS00800 0.36 -2.1 182,752 + HGI48_RS00800 0.77 +1.3 182,753 - HGI48_RS00800 0.77 -0.4 182,760 + +2.9 182,761 - HGI48_RS00800 0.78 -0.2 182,761 - HGI48_RS00800 0.78 -1.9 182,894 + +0.9 182,942 + +0.1 182,943 - +0.3 182,943 - -0.1 182,943 - +0.3 183,067 - -1.4 183,136 + +0.2 183,136 + +1.7 183,141 + -0.3 183,153 - +0.4 183,153 - -0.9 183,153 - -0.5 183,187 - -0.0 183,197 + -0.4 183,197 + +0.6 183,203 + +1.3 183,204 - +0.6 183,207 + +1.3 183,207 + -0.1 183,208 - +0.7 183,227 + +0.5 183,227 + -0.4 183,227 + -0.7 183,227 + -0.9 183,227 + +0.3 183,227 + -0.1 183,228 - -1.1 183,228 - +0.9 183,228 - -1.9 183,228 - -1.5 183,228 - +0.3 183,228 - -0.9 183,228 - +1.6 183,230 - -0.4 183,246 + -0.1 183,246 + -0.1 183,247 - -0.1 183,267 - -0.1 183,267 - -3.1 183,329 + -0.8 183,330 - -2.8 183,330 - -0.7 183,330 - +1.9 183,339 + -1.4 183,339 + -2.5 183,340 - -0.4 183,347 + +0.3 183,347 + +0.2 183,348 - +0.9 183,348 - +0.1 183,392 + +0.9 183,393 - -0.7 183,396 + -0.3 183,405 - HGI48_RS00805 0.11 -1.7 183,429 + HGI48_RS00805 0.15 +2.5 183,532 + HGI48_RS00805 0.32 -1.5 183,532 + HGI48_RS00805 0.32 -3.7 183,532 + HGI48_RS00805 0.32 -1.7 183,532 + HGI48_RS00805 0.32 -1.1 183,532 + HGI48_RS00805 0.32 +0.1 183,532 + HGI48_RS00805 0.32 +0.2 183,532 + HGI48_RS00805 0.32 +0.7 183,532 + HGI48_RS00805 0.32 +0.1 183,532 + HGI48_RS00805 0.32 -1.1 183,532 + HGI48_RS00805 0.32 -1.7 183,533 - HGI48_RS00805 0.32 +1.5 183,533 - -0.1 183,533 - HGI48_RS00805 0.32 +0.1 183,533 - HGI48_RS00805 0.32 -1.2 183,533 - HGI48_RS00805 0.32 +0.1 183,533 - HGI48_RS00805 0.32 +0.5 183,533 - +1.3 183,556 - HGI48_RS00805 0.36 +1.3 183,568 + HGI48_RS00805 0.38 -0.7 183,569 - HGI48_RS00805 0.38 -1.2 183,569 - HGI48_RS00805 0.38 +2.4 183,619 + HGI48_RS00805 0.46 -0.2 183,664 + HGI48_RS00805 0.54 -1.2 183,664 + +1.9 183,664 + HGI48_RS00805 0.54 +0.2 183,705 + HGI48_RS00805 0.61 -0.7 183,706 - -0.7 183,721 + +0.9 183,811 + HGI48_RS00805 0.78 +1.6 183,811 + HGI48_RS00805 0.78 -0.9 183,811 + HGI48_RS00805 0.78 -2.2 183,812 - HGI48_RS00805 0.78 -0.1 183,853 + HGI48_RS00805 0.85 -1.1 183,853 + HGI48_RS00805 0.85 -1.7 183,880 + HGI48_RS00805 0.90 +0.5 183,880 + HGI48_RS00805 0.90 -1.9 183,880 + HGI48_RS00805 0.90 -1.4 183,880 + HGI48_RS00805 0.90 +0.2 183,881 - HGI48_RS00805 0.90 -1.7 183,881 - HGI48_RS00805 0.90 -2.1 183,881 - HGI48_RS00805 0.90 -0.1 183,895 + -0.8 183,895 + -1.1 183,895 + -1.4 183,895 + +1.3 183,895 + -0.5 183,895 + +1.7 183,895 + -0.4 183,895 + -0.1 183,895 + +0.9 183,895 + -0.5 183,895 + +0.5 183,896 - -1.9 183,896 - -0.4 183,896 - -0.1 183,896 - -0.1 183,896 - -0.2 183,896 - -1.1 183,896 - -0.4 183,897 + -0.4 183,898 - -0.1 183,898 - -0.4 183,900 + -0.4 183,901 - +0.6
Or see this region's nucleotide sequence